Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J04
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23450-3|AAN39678.1|  132|Caenorhabditis elegans Hypothetical pr...   140   7e-34
U23450-4|AAN39679.1|  130|Caenorhabditis elegans Hypothetical pr...   133   8e-32
AC025727-1|AAG23391.3|  429|Caenorhabditis elegans Hypothetical ...    31   0.84 
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    28   4.5  
AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical ...    28   4.5  
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    27   7.8  
AC024755-5|AAK84601.1|  153|Caenorhabditis elegans Hypothetical ...    27   7.8  

>U23450-3|AAN39678.1|  132|Caenorhabditis elegans Hypothetical
           protein C30B5.2a protein.
          Length = 132

 Score =  140 bits (339), Expect = 7e-34
 Identities = 63/125 (50%), Positives = 90/125 (72%)
 Frame = +2

Query: 152 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 331
           M G++ + +LAFAG +G+TF++L CALP+Y  W P FV+ FY+L P+P +IARR  +   
Sbjct: 1   MGGVRAVAALAFAGVVGLTFLVLGCALPRYGTWTPMFVITFYVLSPVPLLIARRFQEDMT 60

Query: 332 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIF 511
           G+N AC+E A+FIT G ++S+FALPIVLA AG I   AC+L   G+VI++ TI+ +F + 
Sbjct: 61  GTN-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTIIAYFYLH 119

Query: 512 DMDDS 526
             DDS
Sbjct: 120 RDDDS 124


>U23450-4|AAN39679.1|  130|Caenorhabditis elegans Hypothetical
           protein C30B5.2b protein.
          Length = 130

 Score =  133 bits (322), Expect = 8e-32
 Identities = 62/125 (49%), Positives = 89/125 (71%)
 Frame = +2

Query: 152 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 331
           M G++ + +LAFAG +G+TF++L CALP  + W P FV+ FY+L P+P +IARR  +   
Sbjct: 1   MGGVRAVAALAFAGVVGLTFLVLGCALP--RTWTPMFVITFYVLSPVPLLIARRFQEDMT 58

Query: 332 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIF 511
           G+N AC+E A+FIT G ++S+FALPIVLA AG I   AC+L   G+VI++ TI+ +F + 
Sbjct: 59  GTN-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTIIAYFYLH 117

Query: 512 DMDDS 526
             DDS
Sbjct: 118 RDDDS 122


>AC025727-1|AAG23391.3|  429|Caenorhabditis elegans Hypothetical
           protein Y73E7A.3 protein.
          Length = 429

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 22/72 (30%), Positives = 35/72 (48%)
 Frame = +1

Query: 70  YYLLAEVYFISGVFKQEENNYT*NIKHNGWNKRFGVVGIRGFNWNDICHTSLCLTTIQTM 249
           Y+LL  VY IS   K +EN     ++  GW  R+ ++ I     N +   +   T + T 
Sbjct: 100 YFLLCFVYCISLACKNDENGLVVVLRKRGW--RYLILAIIDVEANYMIVKAYQYTNL-TS 156

Query: 250 VAILRCAILHSV 285
           V +L CA + +V
Sbjct: 157 VQLLDCATIPTV 168


>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
           protein F52G3.4 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 325 CWRFKFRLYGNCSIYHNGIFSQLFC 399
           C+R++ RLY  C   H+G   +L+C
Sbjct: 736 CYRYQDRLYYVCRFQHHGSIIELWC 760


>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
           protein F17C8.1 protein.
          Length = 1253

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +2

Query: 170 LVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGSNSAC 349
           +VSL     I   F   ACA    + + P   +  +++C +  +I       A  +  A 
Sbjct: 96  IVSLCLCAIIFAMFAFTACAAQYQRFYMPTSFLCTFLICLVTLLIFSAENQAAFMTPVAS 155

Query: 350 METAVFITMGFLVSSFALPIVLA-RAGVIF 436
           + T+  + +  + +   LP+ L    G+I+
Sbjct: 156 LATSFQVVL-LIYTVIPLPLYLCILIGIIY 184


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 380 FLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFD 514
           F  ++F LPI ++ A +  W   YLT    + V L I  +  +FD
Sbjct: 75  FSATNFQLPINISNAFITVWSCFYLTTFSFISV-LFIYRYLCLFD 118


>AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical
           protein Y50D7A.1 protein.
          Length = 791

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 314 HTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGN 469
           HT GA  ++   ++TA       ++SS   P  +  A ++ WG   +   GN
Sbjct: 163 HTPGAVFNDLWRLDTATLKWSRVIISSAPYPSAMCYASLVTWGTQLILFGGN 214


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = -3

Query: 477 TITLPASVR*HAPQKITPALARTIGSAKELTKNPIVINTAVSIQA 343
           T+T+P++ +   P+  +PA  R+  S++E+T  P V   A  ++A
Sbjct: 50  TLTMPSTSQDIQPES-SPAHGRSAPSSQEITSPPTVRRVATPLEA 93


>AC024755-5|AAK84601.1|  153|Caenorhabditis elegans Hypothetical
           protein Y34B4A.5 protein.
          Length = 153

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
 Frame = +1

Query: 163 KRFGVV---GIRGFNWNDICHTSLCLTTIQTMVAILRCAILHSVPNTYDDR*EAY*WCWR 333
           K+FG     G  GF+ ND+C +++  +T QT ++  R     ++   Y +       C  
Sbjct: 54  KQFGFACGAGFEGFSNNDVCMSNI-FSTKQTQISDCRATFAKNLLADYKNH------C-- 104

Query: 334 FKFRLYGNCSIYHNGIFSQLFCATDSSRQGWCDF 435
             F  Y  C    N +F    C ++SS  G C++
Sbjct: 105 MYFEQYTGC---FNALFDHSSCNSESSWWG-CEY 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,892,893
Number of Sequences: 27780
Number of extensions: 294661
Number of successful extensions: 716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)