Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_J02
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor c... 31 0.14
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 29 0.44
SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit Ssr2|Schizosa... 29 0.76
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 1.0
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 28 1.0
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 27 3.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 3.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 26 4.1
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 4.1
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPCC794.15 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 9.4
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 25 9.4
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 25 9.4
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 25 9.4
SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Sch... 25 9.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 9.4
>SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor
complex subunit Rrn5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 556
Score = 31.1 bits (67), Expect = 0.14
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 452 ECETPNKMD-DKDVLKFPTVKQR-MPKALWSTDEKNLFFEALNEYGK-DFDAITAYIRGK 622
E ET NK D D + ++ + + WS +EK LFF+A+ GK D D I I K
Sbjct: 45 EVETENKRDFDLEEEQWGVLSGSCVDGTYWSAEEKELFFQAVARNGKRDLDLIAYSIPSK 104
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 29.5 bits (63), Expect = 0.44
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +2
Query: 122 KTPPMSTMPNKDNIRTPTTEVKPSINPVLQVVTAKSTMVPIKVV--PKAMKETPMSPPSM 295
+T P S K N TT+ P+I QV+ A S P++ K+ K P SP S
Sbjct: 249 QTNPSSISKGKKNNSNNTTQKGPNIISSPQVINASS---PVRKAGKKKSKKALPTSPLSS 305
Query: 296 SPADTERTELLGSLTT 343
S D + S T
Sbjct: 306 SSPDASYNSVSDSFHT 321
>SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit
Ssr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 503
Score = 28.7 bits (61), Expect = 0.76
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 533 WSTDEKNLFFEALNEYGKDFDAITAYIRGKIK 628
WS E L EA+ YG D++ I ++ + K
Sbjct: 250 WSNQETLLLLEAIETYGDDWNQIALHVGSRTK 281
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 170 PTTEV-KPSINPVLQVVTAKSTMVPIKVVPKAMKETPMSPPSMSP 301
PT E+ + N LQ+ +A + V A TP PPS SP
Sbjct: 87 PTLEIGEIDYNEALQIRSADENQQSVPTVSIASPSTPELPPSSSP 131
>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 488
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 491 LKF-PTVKQRMPKALWSTDEKNLFFEALNEYGKDFDAITAYIRG 619
LKF P + + P A+ S DEK+ F+A+ E K DA + + G
Sbjct: 272 LKFLPRLCELHPDAINSLDEKHQLFDAVRERMKTNDATSILLYG 315
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.1
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +2
Query: 179 EVKPSINPVLQVVTAKSTMVPIKVVPKAMKETPMSPPSMSPADTERTELLGSLTTQQQQR 358
EVK S++ + +PI K S S + T+ +G TTQ
Sbjct: 150 EVKNSLHDSTDLSITHHPHLPINHQGNTWKHANESLQS-NQGPVPNTKFVGLETTQTDSY 208
Query: 359 TSARVIKKLKLEPQGDKRVAKRSE-GASDDITECETPNKMDDKDVLKFPTVKQRMPKALW 535
+ V +K+E + D A R E G + T E P+ FP ++ L
Sbjct: 209 QQSSVNSVVKIE-EADATYALREESGQFNTFTGAENPSISPHSLNPNFPQYTEKPALTLL 267
Query: 536 STDEKNLFFEALN 574
+ ++N ++ N
Sbjct: 268 QSPKQNSNYDTSN 280
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +2
Query: 155 DNIRTPTTEVKPSINPVLQVVTAKSTMVPIKVVPKAMKETPMSPPSMSPADTERT 319
D + T T V + + + K + P+ TP++P S+SP RT
Sbjct: 1029 DAVDTSTATVAATTTTAEEELPQKESQERSSPSPENQDSTPLAPKSVSPKQAART 1083
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 125 TPPMSTMPNKDNIRTPTTEVKPSINPVLQVVTAKSTMVPIKVVPKAMKETPM 280
T P + M T T V+ I P VVT + MV + P + TPM
Sbjct: 263 TLPTAAMTTPVEETTTTPMVETMITPT--VVTTTTPMVETMITPTVVTTTPM 312
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 464 PNKMDDKDVLKF--PTVKQRMPKALWSTDEKNLFFEALNEY 580
P+ D LK P V K LW+TD+KN+ L E+
Sbjct: 1531 PSNAYPLDSLKLLNPHVVYTYLKYLWATDQKNIAVSELEEF 1571
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 124 FKGNNLFKALNESKSISCD 68
++ NL +LNE KS+SCD
Sbjct: 69 YRLQNLAASLNEKKSLSCD 87
>SPCC794.15 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 86
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 170 PTTEVKPSINPVLQVVTAKSTMVPIKVVPKAMKETP-MSPPSMSPADT 310
PTT + + +PV++ V PI VV + K+ P +S P P++T
Sbjct: 9 PTTNQQQNSSPVIKEVDLNQN-TPIPVVWQKTKKPPFVSFPRHEPSET 55
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +2
Query: 407 KRVAKRSEGASDDITECETPNKMDDKDVLKFPTVKQRMPKALWSTDEKNLFFEALNEYGK 586
K RS S I + + +K+ V K ++ PK TD+K++ + + +
Sbjct: 202 KETLPRSSTTSYSIRDADKHHKLTTSGVTKMNITERCKPKTTIQTDKKHI----IRPFIE 257
Query: 587 DFDAITAYIRGKI 625
D + + + GK+
Sbjct: 258 DKSHVESIMTGKV 270
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = +2
Query: 116 AFKTPPMSTMPNKDNIRTPTTEVKPSINPVLQVVTAKSTMVPIKVVPKAMKETPMSPP 289
A MST P+ R + ++K S V ++ + +PK P +PP
Sbjct: 164 AISVASMSTSPSNYASRASSPDMKSSAAVTANVSPIQNVAQHVSTLPKISPIPPSNPP 221
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 512 QRMPKALWSTDEKNLFFEALNEYGKDFDAITAYIRGK 622
Q MP +W+ ++ ++F + +GK F I + GK
Sbjct: 245 QSMPD-IWNEEQHSIFVQQFILHGKKFGKIAEAVPGK 280
>SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 533 WSTDEK-NLFFEALNEYGKDFDA--ITAYIRGK 622
W+ DE + +EALNEY K D + I GK
Sbjct: 253 WTPDEDIYILWEALNEYDKTLDTPKLLVLITGK 285
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.0 bits (52), Expect = 9.4
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +2
Query: 170 PTTEVKPSINPVLQVVTAKSTMVPIKVVPKAMKETPMSPPSMS----PADTERTELLGSL 337
P + KP+ + + AKS P+ ++T PP+ + P T+ + S
Sbjct: 988 PVVQNKPAATKPVSMPAAKSKPAPMANPVSTAQQTQNRPPAPAMQARPNTTQAAAPVTST 1047
Query: 338 TTQQQQRTSARVIK 379
TT +Q T+ K
Sbjct: 1048 TTTIKQATTVSASK 1061
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,364,982
Number of Sequences: 5004
Number of extensions: 45111
Number of successful extensions: 155
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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