Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_I23
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1245 - 27308143-27308787,27308923-27308983,27309064-273094... 70 2e-12
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 66 2e-11
03_01_0456 - 3495537-3496205,3496304-3496364,3496447-3496829,349... 64 1e-10
11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158 63 2e-10
06_01_0061 + 527417-527856,527957-528017,528113-528685 62 6e-10
03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137... 61 8e-10
05_05_0075 + 22209322-22210041,22210323-22210391,22210775-222111... 59 4e-09
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411... 58 6e-09
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 52 4e-07
03_01_0163 + 1323296-1323457,1323994-1324125,1324375-1324508,132... 52 4e-07
02_01_0617 + 4625564-4625887,4626824-4626944,4627643-4627833,462... 52 4e-07
06_03_0929 - 26028345-26028390,26028474-26028610,26028695-260288... 51 1e-06
03_05_0645 - 26381559-26381819,26381899-26382105 50 1e-06
01_02_0105 + 11171422-11171667,11171923-11172111 49 3e-06
03_05_0648 - 26403249-26403357,26405142-26405284,26405425-264056... 48 6e-06
05_01_0224 - 1662818-1663033,1663183-1663266,1663315-1663434,166... 48 1e-05
10_08_0749 - 20282982-20283632,20284081-20284141,20284828-202848... 46 2e-05
03_05_1024 + 29802831-29804208,29804710-29804759,29805569-298059... 44 2e-04
03_05_0985 - 29424698-29425183 42 7e-04
03_06_0116 + 31773295-31773603,31773800-31773946,31774080-317741... 36 0.034
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 36 0.044
03_06_0114 + 31751471-31751785,31751919-31752056,31752183-317522... 35 0.078
03_05_0982 - 29394513-29394719,29395314-29395327,29395652-293956... 35 0.078
03_02_0513 + 9035204-9035422,9035552-9036091,9036512-9036742,903... 34 0.14
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 32 0.41
08_01_1057 + 10761508-10761758,10762155-10762267,10762681-107627... 32 0.41
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 31 0.95
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931... 31 1.3
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 30 2.2
08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127 29 2.9
07_03_0521 + 19016824-19017000,19017064-19017099,19017860-190186... 29 2.9
04_03_0780 - 19550106-19550809,19550982-19551003 29 2.9
11_08_0006 - 27548581-27549177 29 5.1
07_03_1685 + 28645284-28645454,28645681-28647069 28 6.7
07_03_0546 - 19325526-19326054,19327109-19327631,19327898-193281... 28 6.7
05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449... 28 6.7
03_05_0306 - 22956474-22956980 28 6.7
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 6.7
01_06_0968 + 33466574-33466607,33467087-33467115,33467438-334675... 28 6.7
12_01_0387 - 3028922-3029689,3032116-3032832 28 8.9
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 28 8.9
>12_02_1245 -
27308143-27308787,27308923-27308983,27309064-27309440,
27309657-27310517
Length = 647
Score = 70.1 bits (164), Expect = 2e-12
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Frame = +1
Query: 307 DENESGTDGEADRSR------RQTILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWL 468
+EN SG +G+ R R RQ GM PQ R +RG L ++SV IL+ WL
Sbjct: 351 EENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQN---AWRPQRG-LPENSVTILRAWL 406
Query: 469 YDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMI 600
++H + YP D+EK+ L+++ L+ Q+ NWFINAR R+ MI
Sbjct: 407 FEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMI 450
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = +1
Query: 307 DENESGTDGEADRSRR-QTILHGVSGMQPQG--QIVTIRKRRGNLAKHSVKILKRWLYDH 477
+E+ SG +G+ R R L Q G Q R +RG L ++SV IL+ WL++H
Sbjct: 345 EESSSGKEGKLTRLRYIDQQLRQQRAFQQYGLLQQNAWRPQRG-LPENSVSILRAWLFEH 403
Query: 478 RYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMI 600
+ YP D+EK+ L+++ L+ Q+ NWFINAR R+ MI
Sbjct: 404 FLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMI 444
>03_01_0456 -
3495537-3496205,3496304-3496364,3496447-3496829,
3496924-3497613
Length = 600
Score = 64.1 bits (149), Expect = 1e-10
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 340 DRSRRQTILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIAL 519
D+ RQ GM Q Q R +RG L + +V +L+ WL++H + YP D+EK+ L
Sbjct: 311 DQQLRQQRAMQQFGMMQQPQHAW-RPQRG-LPESAVSVLRAWLFEHFLHPYPKDSEKLML 368
Query: 520 SQEANLSVLQVCNWFINARRRILPEMI 600
+++ LS QV NWFINAR R+ MI
Sbjct: 369 ARQTGLSRGQVSNWFINARVRLWKPMI 395
>11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158
Length = 425
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 412 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 591
R +RG L + SV IL+ WL++H + YP D++KI L+++ L+ QV NWFINAR R+
Sbjct: 111 RPQRG-LPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWK 169
Query: 592 EMI 600
M+
Sbjct: 170 PMV 172
>06_01_0061 + 527417-527856,527957-528017,528113-528685
Length = 357
Score = 61.7 bits (143), Expect = 6e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Frame = +1
Query: 226 IRDARVAN-RQQSSSPGVRNRFPSTSSTDENESGTDGEADRSR-RQTILHGVSGMQPQGQ 399
+RDA V R ++ G R + T G+ R R L Q G
Sbjct: 57 LRDALVGQVRALRNAMGESQRDAAGGVAAAAPGATKGDTPRLRVLDQCLRQQRAFQQSGA 116
Query: 400 IVTI--RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINA 573
+ + R +RG L + +V +L+ WL++H + YP+D +K L+++ LS QV NWFINA
Sbjct: 117 VDSFPWRPQRG-LPERAVAVLRAWLFEHFLHPYPNDVDKHILARQTGLSRSQVSNWFINA 175
Query: 574 RRRILPEMI 600
R R+ MI
Sbjct: 176 RVRLWKPMI 184
>03_01_0167 +
1374578-1375243,1375895-1376277,1377947-1378007,
1378721-1379386
Length = 591
Score = 61.3 bits (142), Expect = 8e-10
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +1
Query: 226 IRDARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRS-RRQTILHGVSGMQPQGQI 402
+RD VA + Q++ + + S + T ++ D+ R L GV+ M
Sbjct: 268 LRDGIVA-QLQAARKALGEKDVSAAGTTRGQTPRLRVIDQCIRHHKSLQGVAAMDSHPW- 325
Query: 403 VTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 582
R +RG L +V IL+ WL++H + YPSD +K L+++ LS QV NWFINAR R
Sbjct: 326 ---RPQRG-LPDRAVTILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 381
Query: 583 ILPEMI 600
+ M+
Sbjct: 382 LWKPMV 387
>05_05_0075 +
22209322-22210041,22210323-22210391,22210775-22211145,
22212291-22212351,22212496-22213086
Length = 603
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +1
Query: 412 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 591
R +RG L + +V +L+ WL++H + YP+D++K L+++ L+ QV NWFINAR R+
Sbjct: 363 RPQRG-LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWK 421
Query: 592 EMI 600
M+
Sbjct: 422 PMV 424
>01_06_1342 -
36438869-36439459,36439567-36439627,36440751-36441130,
36441955-36442761
Length = 612
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +1
Query: 412 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 591
R +RG L + +V +L+ WL++H + YP+D +K L+++ L+ QV NWFINAR R+
Sbjct: 372 RPQRG-LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWK 430
Query: 592 EMI 600
M+
Sbjct: 431 PMV 433
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 340 DRSRRQTILHGVSG-MQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIA 516
D+ + +L SG + Q + +K++G L K + + L W H YPS+ EKIA
Sbjct: 439 DKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIA 498
Query: 517 LSQEANLSVLQVCNWFINARRR 582
L++ L Q+ NWFIN R+R
Sbjct: 499 LAESTGLDQKQINNWFINQRKR 520
>03_01_0163 +
1323296-1323457,1323994-1324125,1324375-1324508,
1324618-1324621
Length = 143
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 409 IRKRR-GNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 582
+RKRR G L + ILK+W H YP++ +K L +E L + Q+ NWFIN R+R
Sbjct: 68 LRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 126
>02_01_0617 +
4625564-4625887,4626824-4626944,4627643-4627833,
4627910-4628041,4628132-4628269
Length = 301
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 409 IRKRR-GNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 582
+RKRR G L + ILK W H YP++ +K L QE L + Q+ NWFIN R+R
Sbjct: 226 LRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 284
>06_03_0929 -
26028345-26028390,26028474-26028610,26028695-26028826,
26028901-26029109,26029554-26029674,26030730-26031080
Length = 331
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 409 IRKRR-GNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 582
+RKRR G L + LK W H YP++ +K L QE L + Q+ NWFIN R+R
Sbjct: 241 LRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 299
>03_05_0645 - 26381559-26381819,26381899-26382105
Length = 155
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 340 DRSRRQTILHGVSG-MQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIA 516
D+ + +L+ SG + + ++ +K++G L + + + L W H YPS+ EK A
Sbjct: 16 DKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAA 75
Query: 517 LSQEANLSVLQVCNWFINARRR 582
L++ L Q+ NWFIN R+R
Sbjct: 76 LAESTGLDAKQINNWFINQRKR 97
>01_02_0105 + 11171422-11171667,11171923-11172111
Length = 144
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +1
Query: 295 TSSTDENESGTDGEADRSRRQTILHGVSGMQPQGQIVTIRKRR-GNLAKHSVKILKRWLY 471
T D + + AD ++ +L SG + + ++KR+ G L K + L W
Sbjct: 14 TDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWN 73
Query: 472 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 582
H YP++ +K+ L+ L Q+ NWFIN R+R
Sbjct: 74 THYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKR 110
>03_05_0648 -
26403249-26403357,26405142-26405284,26405425-26405675,
26405707-26405713
Length = 169
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 424 GNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 582
G+L + + L +W + H YPS+AEK AL++ L QV NWFIN R+R
Sbjct: 62 GHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKR 114
>05_01_0224 -
1662818-1663033,1663183-1663266,1663315-1663434,
1664527-1664655,1664743-1664988
Length = 264
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 337 ADRSRRQTILHGVSGMQPQGQIVTIRKRR-GNLAKHSVKILKRWLYDHRYNAYPSDAEKI 513
AD ++ +L SG + + ++KR+ G L K + L W H YP++ +K+
Sbjct: 28 ADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKV 87
Query: 514 ALSQEANLSVLQVCNWFINARRR 582
L+ L Q+ NWFIN R+R
Sbjct: 88 RLAAMTGLDPKQINNWFINQRKR 110
>10_08_0749 -
20282982-20283632,20284081-20284141,20284828-20284872,
20285293-20285672,20286382-20287050
Length = 601
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 15/78 (19%)
Frame = +1
Query: 412 RKRRGNLAKHSVKILKRWLYDHRYNA---------------YPSDAEKIALSQEANLSVL 546
R +RG L + +V IL+ WL++H + YPSD +K L+++ LS
Sbjct: 326 RPQRG-LPERAVSILRAWLFEHFLHPRMFAGFVTMLKLSPRYPSDVDKHILARQTGLSRS 384
Query: 547 QVCNWFINARRRILPEMI 600
QV NWFINAR R+ M+
Sbjct: 385 QVANWFINARVRLWKPMV 402
>03_05_1024 +
29802831-29804208,29804710-29804759,29805569-29805954,
29807753-29807813,29807921-29807941
Length = 631
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +1
Query: 349 RRQTILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQE 528
R+Q H + M+ + R +RG L + SV IL+ WL++H + YPSDA+K L+++
Sbjct: 564 RQQRAFHHMGIMEQEAW----RPQRG-LPERSVNILRSWLFEHFLHPYPSDADKHLLARQ 618
Query: 529 ANLS 540
LS
Sbjct: 619 TGLS 622
>03_05_0985 - 29424698-29425183
Length = 161
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 340 DRSRRQTILHGVSG-MQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIA 516
D++ ++ +L SG + + ++ ++++G L K + + L W H PS+ EKIA
Sbjct: 21 DKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIA 80
Query: 517 LSQEANLSVLQVCNWFINARRR 582
L++ L Q+ N FIN R+R
Sbjct: 81 LAESTGLEQKQINNCFINQRKR 102
>03_06_0116 +
31773295-31773603,31773800-31773946,31774080-31774158,
31777558-31778180
Length = 385
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 490 YPSDAEKIALSQEANLSVLQVCNWFINARRR 582
Y + EK+ L+Q L Q+ NWFIN R+R
Sbjct: 296 YEQEVEKMTLAQTTGLDQKQISNWFINQRKR 326
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 35.5 bits (78), Expect = 0.044
Identities = 36/145 (24%), Positives = 58/145 (40%)
Frame = +1
Query: 175 EMAFQHRRDVRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSRR 354
+ AFQH++ L +I A +S +R+R DE ES + E
Sbjct: 36 QQAFQHQQQQHHLLDQI-----PATTAESGDNMIRSRASDPLGGDEFESKSGSE------ 84
Query: 355 QTILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEAN 534
V G+ Q R R+ +H+ ++ + +P D ++ LS+E
Sbjct: 85 -----NVDGVSVDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELG 139
Query: 535 LSVLQVCNWFINARRRILPEMIRRE 609
L LQV WF N R ++ + R E
Sbjct: 140 LEPLQVKFWFQNKRTQMKNQHERHE 164
>03_06_0114 +
31751471-31751785,31751919-31752056,31752183-31752291,
31756033-31756598
Length = 375
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 490 YPSDAEKIALSQEANLSVLQVCNWFINARRR 582
Y + EK+ L+Q L Q+ NWFIN R+R
Sbjct: 290 YEQEMEKMTLAQTTGLDQKQINNWFINQRKR 320
>03_05_0982 -
29394513-29394719,29395314-29395327,29395652-29395697,
29395798-29396040
Length = 169
Score = 34.7 bits (76), Expect = 0.078
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 499 DAEKIALSQEANLSVLQVCNWFINARRR 582
+++K+AL++ L + Q+ NWFIN R+R
Sbjct: 102 ESQKVALAESTGLDLKQINNWFINQRKR 129
>03_02_0513 +
9035204-9035422,9035552-9036091,9036512-9036742,
9036829-9036969,9037344-9037541,9037644-9037937
Length = 540
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +1
Query: 157 EQRDRTEMAFQHRRDVRELTREIIR-----DARVANRQQSSSPGVRNRFPSTSSTDENES 321
EQR R + H + L REI+R AR A+ S G + F S D++E
Sbjct: 115 EQRHRPDFVTTHDTEDNYLAREILRAEAGLGARYADACLSEDAGFSSIFSDESEVDDDEQ 174
Query: 322 GTDGEADRSRRQT 360
G A +S RQ+
Sbjct: 175 CVQGVAVKSVRQS 187
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +1
Query: 115 E*STMLPPTAGLSQEQRDRTEMAFQHRRDVRELTREIIRDARVANRQQSSSPGVRNRFPS 294
E S+ +A +E D+ E F+H + VRE RE RDA+ NR+Q RF +
Sbjct: 462 EHSSSAAASAAAMKEAMDKAEAKFKHAKVVRE--RE--RDAKHRNREQQEQDD-EARF-N 515
Query: 295 TSSTDENESGTDGEADRSRRQ 357
T +E + E +R RQ
Sbjct: 516 TQDHEERDRQERLEREREMRQ 536
>08_01_1057 +
10761508-10761758,10762155-10762267,10762681-10762733,
10763892-10764248
Length = 257
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 202 VRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSRRQTILHGVSG 381
VR T E + + V ++++ S+PG N+ +T + + TDG+ + + I++G +
Sbjct: 175 VRLDTLEGVVNEIVDDKRKGSAPGFSNKEEATKKGERQSNSTDGQVVPVKSKDIINGATN 234
Query: 382 MQP 390
P
Sbjct: 235 ASP 237
>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
Length = 749
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 412 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 591
+KR +H ++ L+ + + +P D ++ LS+E L LQV WF N R ++
Sbjct: 89 KKRYHRHTQHQIQELEAFFKEC---PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKT 145
Query: 592 EMIRREGH 615
+ R E +
Sbjct: 146 QHERHENN 153
>10_08_1025 -
22391267-22391767,22392641-22392736,22392838-22393106,
22393257-22393431,22393503-22393718,22393819-22393926,
22394020-22394544,22394631-22394819,22394924-22395041,
22395172-22395437,22395521-22395658
Length = 866
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 490 YPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMIRRE 609
+P D +++ LSQE L QV WF N R ++ + R +
Sbjct: 142 HPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRAD 181
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 490 YPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMIRREGHDPLH 627
YPS A K L+QE L+ QV WF + R ++E + H
Sbjct: 727 YPSRATKENLAQELGLTFNQVTKWFSSTRHYARVAATKKENNIENH 772
>08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127
Length = 172
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 379 GMQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCN 558
G+ Q R R+ +H+ ++ + +P D ++ LS+E L LQV
Sbjct: 87 GLSGDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 146
Query: 559 WFINARRRI 585
WF N R ++
Sbjct: 147 WFQNKRTQM 155
>07_03_0521 +
19016824-19017000,19017064-19017099,19017860-19018624,
19018772-19018864,19018944-19019114,19019206-19019397,
19019443-19019530,19019617-19019685,19019841-19020054,
19020136-19020334,19020406-19020504,19020594-19020850,
19020927-19021002,19021091-19021204
Length = 849
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Frame = +1
Query: 310 ENESGTDGEADRSRRQT-----ILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYD 474
E +SG G RS T HG + PQ + + RGNL K + +++ R+
Sbjct: 37 ECKSGAAGAKSRSHSSTGHPKQQSHGRISLSPQSKAFKVSGTRGNLQKTAARVVSRYRQS 96
Query: 475 HRYNAYPSD 501
N D
Sbjct: 97 RVLNRQKKD 105
>04_03_0780 - 19550106-19550809,19550982-19551003
Length = 241
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 316 ESGTDGEADRSRRQTILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYP 495
+S GE R T + G + QG+ ++R R LA H + L+ W +N Y
Sbjct: 119 QSTAIGEQYRKSSTTAMQGRRAII-QGRFFSLRTNRDYLAHHGKRSLRLWCCGPNFNIYV 177
Query: 496 SDA 504
++
Sbjct: 178 GES 180
>11_08_0006 - 27548581-27549177
Length = 198
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 226 IRDARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEAD 342
I + RV NRQ +S V + S TD N+ GE++
Sbjct: 108 IDEGRVCNRQTQASRSVADNRGDDSRTDNNDDSGGGESN 146
>07_03_1685 + 28645284-28645454,28645681-28647069
Length = 519
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 644 RREIV*CNGS*PSRRIISGKMRRLAF 567
RR V CN S++I+SGK ++ AF
Sbjct: 476 RRNAVFCNSDITSQKILSGKRKKFAF 501
>07_03_0546 -
19325526-19326054,19327109-19327631,19327898-19328152,
19328283-19328472,19328473-19328525,19329295-19329555,
19329670-19329720,19329873-19330121,19330225-19330453,
19332245-19332559
Length = 884
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 527 SWLSAIFSASLGYALYLWSYSHRFNIFTE 441
SW+ +F+A L +Y+W+Y + TE
Sbjct: 590 SWVLLVFAAVLYLIMYIWNYGTKLKYETE 618
>05_05_0239 -
23543592-23544293,23544482-23544634,23544737-23544922,
23544951-23545097,23545274-23545411,23545527-23545727
Length = 508
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 367 HGVSGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYD 474
HG G+ Q IV + + G HSV RW YD
Sbjct: 87 HGFWGVLAQQAIVMLDENGGTDDNHSVTSQSRWSYD 122
>03_05_0306 - 22956474-22956980
Length = 168
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 364 GWSAGATGPPRRLCRSHFRPSMKSKGNGFLLQ 269
GW G PRRL R P + +G G +L+
Sbjct: 20 GWRQRLGGEPRRLARRPAFPPLSFRGGGLMLR 51
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 163 RDRTEMAFQHR--RDVRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDENESGTDGE 336
RDR + +HR R+ R+ R+ RD + +++ R+R E E + E
Sbjct: 77 RDRDKDRDRHRSSRERRDRDRDRDRDEKDREKERDKDKERRSRDREKEKEKEKERERERE 136
Query: 337 ADRSRR 354
DR RR
Sbjct: 137 KDRERR 142
>01_06_0968 +
33466574-33466607,33467087-33467115,33467438-33467595,
33468319-33468436,33468520-33468708,33469008-33469343,
33469468-33469569,33469696-33469890,33469993-33470155,
33470314-33470579,33470670-33470765,33470860-33471255,
33471403-33471501
Length = 726
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +1
Query: 376 SGMQPQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVC 555
SG+ P T KR+ L + + K + +P D +K LS+ L + QV
Sbjct: 43 SGLLPVNSSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVK 102
Query: 556 NWFINARRRI 585
WF N R ++
Sbjct: 103 FWFQNKRTQV 112
>12_01_0387 - 3028922-3029689,3032116-3032832
Length = 494
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 496 SDAEKIALSQEANLSVL-QVCNWFINARRRILPEMI 600
++ +++ + + L++L +V NWFINAR R+ M+
Sbjct: 221 AERQELQMKKSKLLNMLDEVSNWFINARVRLWKPMV 256
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 136 PTAGLSQEQRDRTEMAFQHRRDVRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDEN 315
P GLS+ + RT + R+ +++TRE + + S +P ++ +S D+
Sbjct: 552 PLGGLSELPQLRTANSADKRKSSKKVTREAVEQ---HTKSSSRAPTPQH----LASFDKR 604
Query: 316 ESGTDGEADRSRRQT--ILHGVSGMQPQGQIVTIRKRRGNLAKH 441
+G + E R ++ T ++ S + Q Q R+ G+L KH
Sbjct: 605 ANGRNEEISRKQKSTSQLMTENSARRQQMQ----RENNGSLLKH 644
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,396,308
Number of Sequences: 37544
Number of extensions: 463746
Number of successful extensions: 1532
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -