Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I22
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1474 + 37630471-37631736,37631965-37632028,37632928-37633124     30   1.9  
03_05_0842 + 28110940-28111141,28111451-28111879,28112034-281128...    29   4.4  
08_02_1002 + 23439642-23440046,23440558-23440761,23440874-234409...    29   5.8  
02_04_0364 + 22374735-22374749,22374903-22375076,22377858-223779...    29   5.8  
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833     29   5.8  

>01_06_1474 + 37630471-37631736,37631965-37632028,37632928-37633124
          Length = 508

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 232 VFYVEQLEADITVDCEDLLIAPGFIDIQINGGWGVDFS 345
           ++YVE   A I VD EDL I  G  D+Q +G  GV  S
Sbjct: 287 LYYVEL--AGIRVDGEDLAIPRGTFDLQADGSGGVVLS 322


>03_05_0842 +
           28110940-28111141,28111451-28111879,28112034-28112806,
           28114046-28114237,28115116-28115277,28115395-28115861,
           28116339-28116384,28116639-28116647
          Length = 759

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +1

Query: 106 YLFKMKSKSGLTRFHNCYILRDRKIIKED-LWIRDGKIENPERVFYV-EQLEADI 264
           YL K+K KS + +  + Y + D+ ++++D L  RDG+I++   ++ V E  E D+
Sbjct: 451 YLNKLKGKSNIIQLID-YEVTDKSLLQDDSLSPRDGRIKDDHYIYMVLEYGEIDL 504


>08_02_1002 +
           23439642-23440046,23440558-23440761,23440874-23440990,
           23441116-23441511,23441586-23441938,23442067-23442187,
           23442602-23442781,23442813-23442896,23444398-23444523,
           23445286-23445588
          Length = 762

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 349 DSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRIKKTQGNKNGATVLG 519
           DS+NI     KV++ LL   +  F     +SDQ+  R   P +  +  + +GA   G
Sbjct: 392 DSENISTEANKVSEELLTCLLNIFSQMRSSSDQDEDRSSSPSVSGSCESSDGAACAG 448


>02_04_0364 +
           22374735-22374749,22374903-22375076,22377858-22377935,
           22379270-22380407,22380507-22380901,22382230-22382416,
           22382872-22382942,22383705-22383755
          Length = 702

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
 Frame = +1

Query: 457 RQILPRIKKTQGNKNGATVLGVHLEGPFISPTKKGAHVESYIKNPHRGIDTIREVYGSLD 636
           R  L    K   NKN ++    HL+G   S +K  A     ++N    ++T+      L 
Sbjct: 144 RNNLRSCNKINSNKNSSSSSRKHLQGRVSSKSKNTAKESGAVEN----LETLYRCDSDLG 199

Query: 637 NVVIITLAPEL--PGCFEAIKDLTNLGIKVALGHSIASLAEGEK 762
           + +  T  PEL   GC + I+      IK    +S  SL E  K
Sbjct: 200 SFMARTKNPELYRNGCTQRIR-----AIKQRSPNSDTSLVENSK 238


>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
          Length = 503

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 493 NKNGATVLGVHLEGPFISPTKKGAHVES 576
           N NG  V G+ +  P +SP   G HVE+
Sbjct: 269 NCNGVRVDGLSISSPALSPNTDGIHVEN 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,635,503
Number of Sequences: 37544
Number of extensions: 383826
Number of successful extensions: 1018
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)