Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I22
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical pr...   232   3e-61
AJ745072-1|CAG32978.1|  400|Caenorhabditis elegans alpha1,3-fuco...    31   1.3  
AF003386-15|AAB54261.2|  400|Caenorhabditis elegans Fucosyl tran...    31   1.3  
U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical p...    30   2.3  
Z47070-4|CAA87342.1|  363|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z49125-1|CAA88934.1|  424|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical
           protein F59B2.3 protein.
          Length = 418

 Score =  232 bits (567), Expect = 3e-61
 Identities = 112/229 (48%), Positives = 152/229 (66%), Gaps = 5/229 (2%)
 Frame = +1

Query: 136 LTRFHNCYILRDRKIIKEDLWIRDGKIENPERVFYVEQLEADITVDCEDLLIAPGFIDIQ 315
           L +F NC +LR   + KE +W+R+G+I +   VF+ E+  AD+ +DCE L+++PGFID+Q
Sbjct: 20  LVQFLNCLVLRSGGLKKEHIWVRNGRILDERTVFFEEKTMADVQIDCEGLILSPGFIDLQ 79

Query: 316 INGGWGVDFSR---DSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRIKKT 486
           +NGG+G+DFS    D    +EG+A VAK LLAHGVT+F PT+ITS  E Y +ILP +K +
Sbjct: 80  LNGGFGIDFSTYNSDDKEYQEGLALVAKQLLAHGVTSFSPTVITSSPETYHKILPLLKPS 139

Query: 487 QGNKNGATVLGVHLEGPFISPTKKGAHVESYI--KNPHRGIDTIREVYGSLDNVVIITLA 660
             +  GA  LG HLEGPFIS  K+G H E  +        ++ I  VYGS +N+ I+T+A
Sbjct: 140 NASSEGAGNLGAHLEGPFISADKRGCHPEQLVITSLSPNPVEIIEHVYGSTENIAIVTMA 199

Query: 661 PELPGCFEAIKDLTNLGIKVALGHSIASLAEGEKAVECGANLITHLFNA 807
           PEL G  EAI+   + G  V++GHS A L  GE AV  GA +ITHLFNA
Sbjct: 200 PELEGAQEAIEYFVSTGTTVSVGHSSAKLGPGEMAVLSGAKMITHLFNA 248


>AJ745072-1|CAG32978.1|  400|Caenorhabditis elegans
           alpha1,3-fucosyltransferase homologueprotein.
          Length = 400

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 520 VHLEGPFISPTK----KGAHVESYIKNPHRGIDTIREVYGSLDN 639
           +H  G F+ PT+    +G  V+SY   P R + T++ ++G + N
Sbjct: 164 IHKYGTFLIPTQIAESRGFKVQSYYVQPKRLVKTMKGIFGLISN 207


>AF003386-15|AAB54261.2|  400|Caenorhabditis elegans Fucosyl
           transferase protein 3 protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 520 VHLEGPFISPTK----KGAHVESYIKNPHRGIDTIREVYGSLDN 639
           +H  G F+ PT+    +G  V+SY   P R + T++ ++G + N
Sbjct: 164 IHKYGTFLIPTQIAESRGFKVQSYYVQPKRLVKTMKGIFGLISN 207


>U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical
           protein C45G9.11 protein.
          Length = 354

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 402 SWSNSILSYDDYIRS-RNL*ANITKN*ENPRKQKWCYSTWSTFRRPIYKPDQ 554
           SWS  IL +++ + S R L  NI  N EN   +   Y     FRRP +KPDQ
Sbjct: 14  SWSIFILDHEESLASPRKL--NIP-NPENVYSENRRYFADQDFRRPRHKPDQ 62


>Z47070-4|CAA87342.1|  363|Caenorhabditis elegans Hypothetical
           protein T09B9.5 protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 776 PHSTAFSPSAKLAMECPRATLIPRFVRSLIASKQPGSSGASVII 645
           P   + S SA  A++ PRA L P     + + K+P S    V+I
Sbjct: 313 PQVPSASTSATFAIQSPRADLTPNDTLHMESKKKPLSQSPRVVI 356


>Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical
           protein F23B12.6 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 112 FKMKSKSGLTRFHNCYILRDRKIIKEDLWIRDGKI 216
           FK K    +  +H CY+L    + ++    RDGKI
Sbjct: 335 FKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGKI 369


>Z49125-1|CAA88934.1|  424|Caenorhabditis elegans Hypothetical
           protein C47G2.1 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 751 EGEKAVECGANLITHLFNAXLP 816
           EGE  VECG N IT  FN   P
Sbjct: 26  EGEPEVECGPNSITVNFNTRNP 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,646,390
Number of Sequences: 27780
Number of extensions: 363671
Number of successful extensions: 895
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)