Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I22
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   3.4  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   4.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.9  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +1

Query: 649 ITLAPELPGCFEAIKDLTNLGIKVALGHSIASLAEGEKAVECGANLITHL 798
           + LA  +  C E+   +    + + L   I SLA   K +E     +TH+
Sbjct: 69  VVLAKTIAECPESENTVQKAALVLRLREGIGSLARILKTIENFKGTVTHV 118


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 247 QLEADITVDCEDLLIAPGFIDIQINGGWGVDFSRDSDNIEEGVAKVAKNLLAHG 408
           ++  + T+ C+D  +AP   D+     + V    D D++E       KN++A G
Sbjct: 161 EMFCETTIGCKDKNMAPILKDLMETSYFKVVVVEDVDSVE--CCGALKNIVACG 212


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 516 KYCSTIFVSLGFL 478
           KYC  ++VSLG L
Sbjct: 20  KYCEKVYVSLGAL 32


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 472 RIKKTQGNKNGATVLGVHLEGPFISPTK 555
           RI+ T+  KNG  VLG  +E   +SP +
Sbjct: 333 RIQLTE--KNGIDVLGNIMEASILSPNQ 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,182
Number of Sequences: 438
Number of extensions: 4297
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)