Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I19
         (381 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q80TK0 Cluster: MKIAA1107 protein; n=13; Murinae|Rep: M...    34   0.78 
UniRef50_Q23AH6 Cluster: Putative uncharacterized protein; n=2; ...    33   1.4  
UniRef50_A3BSN3 Cluster: Putative uncharacterized protein; n=4; ...    31   5.5  
UniRef50_A4QP83 Cluster: LOC100005466 protein; n=2; Danio rerio|...    31   7.3  
UniRef50_Q1ZL86 Cluster: Putative uncharacterized protein; n=1; ...    31   7.3  
UniRef50_UPI00004982FA Cluster: Der1 family protein; n=1; Entamo...    31   9.6  

>UniRef50_Q80TK0 Cluster: MKIAA1107 protein; n=13; Murinae|Rep:
           MKIAA1107 protein - Mus musculus (Mouse)
          Length = 1236

 Score = 34.3 bits (75), Expect = 0.78
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +1

Query: 64  KMTVCSMNGCHSTSEKHKKDSNITFHGFPSYHRSDNCSENTFRCYKATEINNYTC 228
           K  +C   G  ST    + D  +TFHG       DNC+    +C   T   +  C
Sbjct: 593 KAFLCVPEGTSSTLNPTQSDRRLTFHGAAQSQLPDNCATEDSKCATVTSAVSSKC 647


>UniRef50_Q23AH6 Cluster: Putative uncharacterized protein; n=2;
           Alveolata|Rep: Putative uncharacterized protein -
           Tetrahymena thermophila SB210
          Length = 988

 Score = 33.5 bits (73), Expect = 1.4
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = +1

Query: 46  LPKILL--KMTVCSMNGCHSTSEKHKKDSNITFHGFPSYHRSDN--CSENTFRCYKATEI 213
           LPK +   K  VC   G  +  EK  K S  T+ G       +N  C+  T  C K T +
Sbjct: 436 LPKNIFCDKNNVCQEKGNDTQQEKGCKKSEYTYDGQCLSKMPENAYCNSKTNECQKCTNL 495

Query: 214 NNYTC 228
             YTC
Sbjct: 496 ACYTC 500


>UniRef50_A3BSN3 Cluster: Putative uncharacterized protein; n=4;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 723

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 85  NGCHSTSEKHKKDSNITFHGFPSYHRSDNCSENTFRCY 198
           NG   T   +  DSN+   GF +Y  S N + +TF  Y
Sbjct: 216 NGLRETFTTYGNDSNVIASGFTNYGESGNGATDTFTAY 253


>UniRef50_A4QP83 Cluster: LOC100005466 protein; n=2; Danio
           rerio|Rep: LOC100005466 protein - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 619

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 61  LKMT-VCSMNGCHSTSEKHKKDSNITFHGFP 150
           LKM   C+  GC +   K  KD  ITFH FP
Sbjct: 10  LKMPDFCAAYGCSNERTKKLKDKGITFHRFP 40


>UniRef50_Q1ZL86 Cluster: Putative uncharacterized protein; n=1;
           Vibrio angustum S14|Rep: Putative uncharacterized
           protein - Vibrio angustum S14
          Length = 56

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 98  VHRKNTRKIVTLHFTGFLPIIEATIVQKTLSVVTRLLK 211
           +H  +TR  +  HF  + P   ATI+  TLSV   LL+
Sbjct: 9   IHSNSTRPELAFHFAYYHPDNNATILVSTLSVTYHLLR 46


>UniRef50_UPI00004982FA Cluster: Der1 family protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: Der1 family protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 254

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 127 YYLSCVFPMYYDIRSLNKPSFL 62
           Y+L  VFPMYY+ + L  P FL
Sbjct: 186 YWLETVFPMYYNWKPLELPKFL 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,555,692
Number of Sequences: 1657284
Number of extensions: 3596492
Number of successful extensions: 8825
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8825
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)