Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I19
         (381 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   1.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   1.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   4.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.5  

>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 85  NGCHSTSEKHKKDSNITFH 141
           NGC   +EKHK+      H
Sbjct: 70  NGCAKCNEKHKEGVRKVIH 88


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 85  NGCHSTSEKHKKDSNITFH 141
           NGC   +EKHK+      H
Sbjct: 70  NGCAKCNEKHKEGVRKVIH 88


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -1

Query: 222 IIIYFSSLVTTESVF*TIVASMIGRKPVK--CNVTIFLVF 109
           +++ F + +   SV   +    IGR      CN TIFL+F
Sbjct: 126 LLLLFDAYLWISSVGVRMFQYYIGRSFTYYVCNTTIFLIF 165


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 172 NCRFDDRKETREM*CYYLSCV 110
           NC  D R+  R   C Y  C+
Sbjct: 127 NCIIDKRQRNRCQYCRYQKCL 147


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 40  KVLPKILLKMTVCSMNGCHSTSEKHKKDSNITF 138
           K   K+   +T    NGC    +K K+D +  F
Sbjct: 53  KEAEKLKKGITETMKNGCVKCEQKQKEDVHKVF 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,860
Number of Sequences: 336
Number of extensions: 1142
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)