Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I17
         (402 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical pr...    28   2.9  
U23451-3|AAC46744.1|  106|Caenorhabditis elegans Insulin related...    27   5.0  
AC024832-3|AAF59615.1|  121|Caenorhabditis elegans Hypothetical ...    27   6.7  

>Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical
           protein C18D11.9 protein.
          Length = 111

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 118 WGWGWRKP 95
           WGWGWR+P
Sbjct: 76  WGWGWRRP 83


>U23451-3|AAC46744.1|  106|Caenorhabditis elegans Insulin related
           protein 4 protein.
          Length = 106

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 2   GRPMITXKENLQVALLTCSTNCSPSLL 82
           G P  T +E++ +A + C+T C+PS +
Sbjct: 73  GEPC-TPQEDMDIATVCCTTQCTPSYI 98


>AC024832-3|AAF59615.1|  121|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.2 protein.
          Length = 121

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 58  YKLFTLIALLVAVAFASPNPK 120
           +K F++ ALL  VAFA+ NP+
Sbjct: 30  FKHFSVFALLAVVAFANRNPE 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,740,609
Number of Sequences: 27780
Number of extensions: 63124
Number of successful extensions: 196
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)