Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_I16
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 5.3
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 5.3
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.0
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 7.0
>Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical
protein ZK637.3 protein.
Length = 599
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +3
Query: 303 GIIAAFGDFNSDELTDAFVIKNSS-TVN-----VFLAYDKEPFLRPSEFACN----FSDI 452
G + AFGDFN+D TD V N + T+N + + F + FA + +D
Sbjct: 29 GKVCAFGDFNADRNTDILVFANGTLTINYQETKLLDVLEASKFTPGTSFAISKPSLNADF 88
Query: 453 VITSIVPGDYDGDAYMDILLTTQN 524
V S+ GD++GD+ +D+L++ ++
Sbjct: 89 VECSV--GDFNGDSRLDVLVSIRD 110
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2185 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2221
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2278 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2091 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2127
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2278 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2185 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2221
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2278 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2091 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2127
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2278 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 772 SXYNFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 659
S +F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2277 SDASFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2313
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 678 INVEGKRVFWIFDQSRNKPKEEPMGDEKLYXEINNLTRILF 800
++ EGK ++ ++ ++ KEEP+GD KL +I+ I+F
Sbjct: 474 VSPEGK---FVILENTHRDKEEPLGDWKLKRKIDGKREIVF 511
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 678 INVEGKRVFWIFDQSRNKPKEEPMGDEKLYXEINNLTRILF 800
++ EGK ++ ++ ++ KEEP+GD KL +I+ I+F
Sbjct: 474 VSPEGK---FVILENTHRDKEEPLGDWKLKRKIDGKREIVF 511
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 678 INVEGKRVFWIFDQSRNKPKEEPMGDEKLYXEINNLTRILF 800
++ EGK ++ ++ ++ KEEP+GD KL +I+ I+F
Sbjct: 474 VSPEGK---FVILENTHRDKEEPLGDWKLKRKIDGKREIVF 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,650,716
Number of Sequences: 27780
Number of extensions: 401526
Number of successful extensions: 1057
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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