Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_I15
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 31 0.88
05_07_0105 - 27716126-27716218,27716548-27716658,27716764-277168... 31 1.2
04_03_0688 + 18731432-18732466,18733246-18733362 31 1.2
05_04_0337 - 20372378-20373094,20373320-20373379,20373992-203742... 30 2.0
06_03_0696 + 23617687-23617851,23618838-23619536 30 2.7
01_01_0789 + 6133239-6133656,6134128-6134141 30 2.7
01_01_0604 - 4493868-4494028,4494538-4494746,4495860-4496003,449... 30 2.7
05_05_0214 + 23319507-23321540 29 3.6
01_06_1120 - 34645676-34645768,34645880-34645966,34646443-346465... 29 3.6
01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070 29 3.6
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 27 4.1
05_05_0290 - 23879064-23880035 29 4.7
03_02_0761 - 10963045-10963482,10963713-10963889,10964151-109642... 29 4.7
01_05_0490 + 22672241-22674679 29 4.7
01_01_0274 - 2263304-2264211,2264490-2264673 29 4.7
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 25 5.3
12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597 29 6.2
05_03_0637 - 16465433-16466242 29 6.2
05_03_0557 - 15441039-15442730 29 6.2
04_04_1191 + 31599067-31600194 29 6.2
03_02_0251 - 6821612-6823405,6823738-6823878 29 6.2
06_01_0894 + 6853797-6853971,6855078-6855295,6856353-6856385,685... 28 8.2
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 28 8.2
05_05_0174 - 22960732-22960815,22960907-22961419,22961576-229620... 28 8.2
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 673 HTHNISFVYGRDLLPLVFSGELEGELR--HSRTGLLRDQLD 557
HTHNIS V LP++ +G +G +R HS T L + L+
Sbjct: 223 HTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLN 263
>05_07_0105 -
27716126-27716218,27716548-27716658,27716764-27716815,
27716895-27717034,27717298-27717422,27717514-27717638,
27717853-27717898,27718374-27718947
Length = 421
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 446 EGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEA-STRVAEFAFQFARE 622
E ++ L + D+V N +G+ IE EI+DGVV +++ + ST V + A +
Sbjct: 255 EALQKLNKHYDIVV---NIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTALKPEDASD 311
Query: 623 NKRKKVTAVHKANIMRMSXGL 685
R K ++ + S GL
Sbjct: 312 TNRVKCVLDNQGYAIYFSRGL 332
>04_03_0688 + 18731432-18732466,18733246-18733362
Length = 383
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 5 RPMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
RP+ PPPP A+ R Q ++ AA++ R A AA G R
Sbjct: 228 RPIRPPPPSAAAQRPQRQPRRVAAAAAQLARAADAAAVTTAAAAPHGAR 276
>05_04_0337 -
20372378-20373094,20373320-20373379,20373992-20374266,
20374358-20374619
Length = 437
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 8 PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVRKV-TLIPGHGIG 184
P PP PP A+Y S++ A E AA + + A A ST + ++ TL+ GH G
Sbjct: 313 PPPPRPPCAAAYTSAA--AAPTESAAVLAAASTYSLLAAAGSSSTHIDELSTLLAGHSHG 370
>06_03_0696 + 23617687-23617851,23618838-23619536
Length = 287
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 2 GRPMPPPPPFTASYRSSSQFAKILEMAARIIRKI 103
G+P PPPP A + K+L M AR++R++
Sbjct: 96 GQP-PPPPSLAAPPPAQHDMGKLLRMYARLLRRL 128
>01_01_0789 + 6133239-6133656,6134128-6134141
Length = 143
Score = 29.9 bits (64), Expect = 2.7
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = -2
Query: 696 QRRKRPXDIRIILALCTAVTFFLLFSLANWKANSATLVLASSVISLMDCTTPSTISCSIP 517
+RR P + ++L L A + L S + + SAT +L++ V +++ TT ++ S S P
Sbjct: 4 RRRSFPL-VPLLLFLLAAAAYGRLISDGSPASASATSLLSNPVSAVIRLTTSNSASASSP 62
Query: 516 ------EYSPSVFSLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*P-LPTG 358
E + + T+T+ ++ + L G L YK+ +FL A L + G
Sbjct: 63 PAAAPEEKCEQSYGFLPCTTTVLGNLFL--VLAYGF-LMYKAATFLSAGSELLLEIMGPG 119
Query: 357 VIRGPFKPILLAFTESI 307
++ G PIL A +++
Sbjct: 120 LVGGLLLPILGALPDAL 136
>01_01_0604 -
4493868-4494028,4494538-4494746,4495860-4496003,
4496298-4496539
Length = 251
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 680 GLFLRCCRELATKYPDIKFEXRYLXTVCLNMVQDPSKFDVLVMPN 814
GL C ELAT+YP KF + + T C+ D + +LV N
Sbjct: 134 GLLQTCLDELATRYPATKF-VKIISTDCIPNYPDRNVPTILVYNN 177
>05_05_0214 + 23319507-23321540
Length = 677
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 14 PPPPPFTASYRSSSQFAKILEMAARIIRKIVPA 112
PPPP ++SY SS+ +IL R+ R + A
Sbjct: 12 PPPPSSSSSYSSSASDGEILRSLHRLARDLAAA 44
>01_06_1120 -
34645676-34645768,34645880-34645966,34646443-34646508,
34647126-34647215,34647317-34647397,34647598-34647675,
34647788-34647878,34647969-34648110,34648479-34648590
Length = 279
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -1
Query: 316 RVNRFLGNTEFAIWTPNSCYIHFLPFDRYFSCFEDFLNGDRDLGPNTMSRDERNLAHASA 137
+++ + +FA+ TP S + LP ++ SC G+ + P T + + +L H
Sbjct: 55 QISHNVARFKFALPTPTS--VLGLPIGQHISCRGQDATGEEVIKPYTPTTLDSDLGHFEL 112
Query: 136 VLSSAGSGRW-HNFPDYSCSHFKNFR 62
V+ GR H+F + + + +
Sbjct: 113 VIKMYPQGRMSHHFREMKVGDYMSVK 138
>01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070
Length = 622
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 2 GRPMPPPPPFTASYRSSSQFAKILEMAARIIRKIVP 109
GRP PP P F RS+ ++A RI+RK+ P
Sbjct: 196 GRPSPPAPVFD---RSAIVHPMAADVARRILRKVTP 228
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 2 GRPMPPPPPFTASYRSSSQFAKILEMAARIIRKIVP 109
GRP PP P F RS+ +MA RI+RK P
Sbjct: 352 GRPSPPAPAFD---RSAIVHPMAADMARRILRKKAP 384
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 27.1 bits (57), Expect(2) = 4.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 14 PPPPPFTASYRSSSQFAKILEMAARIIRKIV 106
PPP A+ RSSS + AAR +RK+V
Sbjct: 94 PPPAVDDAAARSSSSSSPASAAAARKVRKVV 124
Score = 20.6 bits (41), Expect(2) = 4.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 8 PMPPPPPFTA 37
P PPPPP A
Sbjct: 56 PPPPPPPTPA 65
>05_05_0290 - 23879064-23880035
Length = 323
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 613 ELEGELR-HSRTGLLRDQLDGLHDSV-DDLVLDTGIL 509
E EG +R H R LR LD +HD + DD D+ IL
Sbjct: 81 EFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSIL 117
>03_02_0761 -
10963045-10963482,10963713-10963889,10964151-10964261,
10964982-10965227,10965571-10965630,10965729-10966034,
10966626-10966769,10966994-10967392
Length = 626
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 8 PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAA 130
P+PPPPP S + + + ++ R+ R V A+ A AA
Sbjct: 11 PLPPPPPLLPSPSAKAPPSAPFSLSLRLRRARVAASAAAAA 51
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 14 PPPPPFTASYR-SSSQFAKILEMAARIIRKIVP 109
PPPPP T S R +S + +L+ AR+ +P
Sbjct: 339 PPPPPLTRSRRWNSERLDAVLDQVARVDETAMP 371
>01_01_0274 - 2263304-2264211,2264490-2264673
Length = 363
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 583 TGLLRDQLDGLHDSVDDLVLDTGILTLGV 497
TGLL ++GL D VDDLV L +GV
Sbjct: 214 TGLLCAGMEGLDDGVDDLVAGIDDLEVGV 242
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 20 PPPFTASYRSSSQFAKILEMA 82
PPP T+SY SSS A L ++
Sbjct: 48 PPPSTSSYPSSSAAAAALPLS 68
Score = 22.6 bits (46), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 8 PMPPPPPFTASY 43
P PPPPP SY
Sbjct: 35 PPPPPPPDLISY 46
>12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597
Length = 389
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 5 RPMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQ 133
+P PPPPP +S AK+ AA +++ R G Q
Sbjct: 9 KPTPPPPPRPVLLAGASGDAKLCRAAALSREEVIRRRRRGLLQ 51
>05_03_0637 - 16465433-16466242
Length = 269
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 8 PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVP 109
P+PPPPP +A+ ++S + +A +R ++P
Sbjct: 110 PLPPPPPSSAAAAAASSSSAASSTSAPPLRPLLP 143
>05_03_0557 - 15441039-15442730
Length = 563
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/100 (25%), Positives = 44/100 (44%)
Frame = -2
Query: 480 TSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*PLPTGVIRGPFKPILLAFTESIAF 301
+ TL Y + + L+GL + S LR+KL+ P P + + LAF
Sbjct: 155 SGTLPYRTALAAVFLEGLIFLFISLVGLRSKLAKFIPKPVRISSSAGIGLFLAFI----- 209
Query: 300 WGIPNLPSGPLTAVTSTSSHSIGTLAASKIF*TATVISGP 181
G+ + L +S++ ++G AS+ A V++ P
Sbjct: 210 -GLQSSEGVGLVGFSSSTLVTLGACPASQRASVAPVVTFP 248
>04_04_1191 + 31599067-31600194
Length = 375
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 330 LLAFTESIAFWGIPNLPSGPLTAVTSTS 247
LL E + FWG+PNL S P + TS
Sbjct: 290 LLTSLERLNFWGLPNLLSLPANLASLTS 317
>03_02_0251 - 6821612-6823405,6823738-6823878
Length = 644
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 8 PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQ 133
P PPPPP T S++ SS ++++ A ++ + AG AQ
Sbjct: 13 PAPPPPPLT-SFKHSSHLLRLVDDDADDGHALLLSKVAGEAQ 53
>06_01_0894 +
6853797-6853971,6855078-6855295,6856353-6856385,
6856776-6856856,6856857-6857069,6857184-6857381,
6857456-6857593,6858528-6858644,6858970-6859104
Length = 435
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 14 PPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRA 121
PPPPPFTA R + + A RI R +PA A
Sbjct: 8 PPPPPFTAG-RLPTTSRRPCFSAGRIFRCSLPAAAA 42
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 789 LEGSCTMLRQTVXRYRXSNLMSGYLVASSRQQRRKRPXDIRIILALCTAVTF 634
L G+C+ V + + + +L+ S ++Q IRII +C+A+ F
Sbjct: 534 LLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIF 585
>05_05_0174 -
22960732-22960815,22960907-22961419,22961576-22962058,
22964191-22964673
Length = 520
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 NANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGIKTL 463
+A +GL + P+G+G+ +L+ ++ F L + P SL G+ +L
Sbjct: 337 SALNVGLGVGAILPLGRGFMNLSSSVPDRFYLGGHSSPVCSLSGLSSL 384
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,861,269
Number of Sequences: 37544
Number of extensions: 536769
Number of successful extensions: 3042
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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