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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I15
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...   386   e-107
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...   213   1e-55
Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...   212   2e-55
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...   202   3e-52
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr...    30   1.8  
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.      30   1.8  
U39650-4|AAK39186.1|  944|Caenorhabditis elegans Apical junction...    29   5.5  
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction...    29   5.5  
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction...    29   5.5  
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction...    29   5.5  
AF067946-3|AAC17682.1|  288|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AF031843-1|AAC13679.1|  579|Caenorhabditis elegans GLY9 protein.       28   9.7  
AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical...    28   9.7  

>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score =  386 bits (950), Expect = e-107
 Identities = 187/260 (71%), Positives = 216/260 (83%), Gaps = 1/260 (0%)
 Frame = +2

Query: 77  MAARIIRKIVPATRAGAAQYSTG-VRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEV 253
           M  + I+K   +T   + +YS+G VR+VTLIPG GIGPEI+ +VQKIFEAA  PI W+ V
Sbjct: 1   MLGKCIKK-ASSTVGQSIRYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPV 59

Query: 254 DVTAVRGPDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRP 433
           DVT V+G DG F IP + I+ ++ANK+GLKGPL TP+GKG+RSLNLA+RKEF LYANVRP
Sbjct: 60  DVTPVKGRDGVFRIPSRCIELMHANKVGLKGPLETPIGKGHRSLNLAVRKEFSLYANVRP 119

Query: 434 CKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQF 613
           C+SLEG KTLYDNVDVVTIRENTEGEYSGIEHEIV GVVQSIKLITE AS  VA FAF++
Sbjct: 120 CRSLEGHKTLYDNVDVVTIRENTEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEY 179

Query: 614 ARENKRKKVTAVHKANIMRMSXGLFLRCCRELATKYPDIKFEXRYLXTVCLNMVQDPSKF 793
           AR+N RK VTAVHKANIMR S GLFL  CRE A  YPDIKF+  YL TVCLNMVQDPS++
Sbjct: 180 ARQNGRKVVTAVHKANIMRQSDGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQY 239

Query: 794 DVLVMPNLYGDIMSDMCSGL 853
           DVLVMPNLYGDI+SD+C+GL
Sbjct: 240 DVLVMPNLYGDILSDLCAGL 259


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score =  213 bits (520), Expect = 1e-55
 Identities = 107/251 (42%), Positives = 156/251 (62%), Gaps = 1/251 (0%)
 Frame = +2

Query: 104 VPATRAGAAQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDG 283
           +P  R   A+Y  G   V  +PG GIGPE+   ++ IF     P+ +EEV V++    DG
Sbjct: 22  IPGHRLPLAKYG-GRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVSSSL-LDG 79

Query: 284 KFGIPQKAIDSVNANKIGLKGPLMTPVGKG-YRSLNLALRKEFDLYANVRPCKSLEGIKT 460
                  AI+    N + +KG + T      + S N+ LR + DLYAN+  C ++  + T
Sbjct: 80  DMDAAMLAIER---NGVAIKGNIETKHDDPQFNSRNVELRTKLDLYANILHCVTIPTVPT 136

Query: 461 LYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFARENKRKKV 640
            +  +D+V IRENTEGEYSG+EHE V G+V+SIK++T E   R++  AF++A+ N RKKV
Sbjct: 137 RHSGIDIVLIRENTEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANGRKKV 196

Query: 641 TAVHKANIMRMSXGLFLRCCRELATKYPDIKFEXRYLXTVCLNMVQDPSKFDVLVMPNLY 820
           TAVHKANI ++  GLFL+  R+++  Y DIKFE   +    + +V  P +FDV+VMPNLY
Sbjct: 197 TAVHKANIQKLGDGLFLKVVRDMSEDYKDIKFEAMIVDNASMQLVSKPQQFDVMVMPNLY 256

Query: 821 GDIMSDMCSGL 853
           G+I+S++  GL
Sbjct: 257 GNIISNIACGL 267


>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score =  212 bits (518), Expect = 2e-55
 Identities = 106/240 (44%), Positives = 158/240 (65%), Gaps = 6/240 (2%)
 Frame = +2

Query: 152 KVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKAIDSVNANK 331
           KVT+IPG G+GPE+   VQ I +   +PIE+EE+ ++ V     +    + A++S+  N 
Sbjct: 44  KVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYT--RSSSIENAVESIGRNN 101

Query: 332 -IGLKGPLMTPV---GKG-YRSLNLALRKEFDLYANVRPCKSLEGIKTLYDN-VDVVTIR 493
            + LKG +        +G  + LN+ LR+  DL+ANV   K+L+GIKT +   +D V +R
Sbjct: 102 NVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQLDFVIVR 161

Query: 494 ENTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFARENKRKKVTAVHKANIMRM 673
           E TEGEYS +EHE+V GV++ +K+ T   + R+A+FAF +A +  RKKVTAVHKANIM++
Sbjct: 162 EQTEGEYSSLEHELVPGVIECLKISTRTKAERIAKFAFDYATKTGRKKVTAVHKANIMKL 221

Query: 674 SXGLFLRCCRELATKYPDIKFEXRYLXTVCLNMVQDPSKFDVLVMPNLYGDIMSDMCSGL 853
             GLFLR C  +A +YP I+FE   +   C+ +V  P +FDV+VMPNLYG+I+ ++ +GL
Sbjct: 222 GDGLFLRTCEGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVMPNLYGNIIDNLAAGL 281


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score =  202 bits (493), Expect = 3e-52
 Identities = 104/248 (41%), Positives = 159/248 (64%), Gaps = 6/248 (2%)
 Frame = +2

Query: 128 AQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKA 307
           A+Y  G   VT++PG GIGPE+   V++I  A + P+++E V++T+            +A
Sbjct: 46  ARYG-GRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDASEDLA---EA 101

Query: 308 IDSVNANKIGLKGPLMTPVGK-GYRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVV 484
           I ++  N + LKG + T      + S NL LR++ +LYANV  C ++  + + +  +D+V
Sbjct: 102 ITAIKRNGVALKGNIETKFDNPSFVSRNLELRRQLNLYANVLHCSTIPTVPSRHTGIDMV 161

Query: 485 TIRENTEGEYSGIEHEIVDG----VVQSIKLITEEASTRVAEFAFQFARENKRKKVTAVH 652
            IRENTEGEYSG EHE V+     VV+S+K++T E S ++  FAFQFA++  RKKVTAVH
Sbjct: 162 IIRENTEGEYSGNEHEAVNAPHPRVVESLKVVTREKSEQITRFAFQFAKKYGRKKVTAVH 221

Query: 653 KANIMRMSXGLFLRCCRELA-TKYPDIKFEXRYLXTVCLNMVQDPSKFDVLVMPNLYGDI 829
           KANI ++  GLFL+   ++A  +YPDI+F    +    + +V  P +FDV++MPNLYG+I
Sbjct: 222 KANIQKLGDGLFLKVATDIAKAEYPDIEFNAMIVDNASMQLVSRPQQFDVMLMPNLYGNI 281

Query: 830 MSDMCSGL 853
           +S++  GL
Sbjct: 282 ISNIACGL 289


>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1229 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1275


>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1251 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1297


>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
            C52A11.4e protein.
          Length = 2184

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1042 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1088


>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1349 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1395


>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1229 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1275


>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1251 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1297


>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
            C52A11.4e protein.
          Length = 2184

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1042 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1088


>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1349 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1395


>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
            C52A11.4c protein.
          Length = 2202

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1060 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1106


>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
          Length = 2166

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 8    PMPPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVR 151
            P+PPPPP   S    S  A + +   R + +++  + A + +Y +G R
Sbjct: 1020 PLPPPPPEVLSSPPKSPVASV-QPTPRDLEEVLTRSTASSLEYHSGQR 1066


>U39650-4|AAK39186.1|  944|Caenorhabditis elegans Apical junction
           molecule protein1, isoform b protein.
          Length = 944

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 17  PPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAG-AAQYSTGVRKVTLIPGHGIGPEI 193
           PPPP     +SSS  A      A  I K + ++R    ++++T    V  IP H   P  
Sbjct: 111 PPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTVREIPVHR-APST 169

Query: 194 TVAVQKIFEAAKVP 235
             +   +FE   +P
Sbjct: 170 APSHSSVFEYHMMP 183


>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
           molecule protein1, isoform c protein.
          Length = 1148

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 17  PPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAG-AAQYSTGVRKVTLIPGHGIGPEI 193
           PPPP     +SSS  A      A  I K + ++R    ++++T    V  IP H   P  
Sbjct: 111 PPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTVREIPVHR-APST 169

Query: 194 TVAVQKIFEAAKVP 235
             +   +FE   +P
Sbjct: 170 APSHSSVFEYHMMP 183


>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
           molecule protein1, isoform d protein.
          Length = 1439

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 17  PPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAG-AAQYSTGVRKVTLIPGHGIGPEI 193
           PPPP     +SSS  A      A  I K + ++R    ++++T    V  IP H   P  
Sbjct: 111 PPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTVREIPVHR-APST 169

Query: 194 TVAVQKIFEAAKVP 235
             +   +FE   +P
Sbjct: 170 APSHSSVFEYHMMP 183


>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
           molecule protein1, isoform a protein.
          Length = 1480

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 17  PPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAG-AAQYSTGVRKVTLIPGHGIGPEI 193
           PPPP     +SSS  A      A  I K + ++R    ++++T    V  IP H   P  
Sbjct: 111 PPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTVREIPVHR-APST 169

Query: 194 TVAVQKIFEAAKVP 235
             +   +FE   +P
Sbjct: 170 APSHSSVFEYHMMP 183


>AF067946-3|AAC17682.1|  288|Caenorhabditis elegans Hypothetical
           protein W02G9.4 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
 Frame = +2

Query: 464 YDNV-DVVTIRENTEGEYSGIEHEIVDGVVQ-SIKLITEEASTRVAEFAFQFARENKRKK 637
           YDN  DVV       G Y  I    +D + + S  ++T E ST V+     FA + +  +
Sbjct: 36  YDNNGDVVYTITIPVGNY--IHLTFLDFLTEDSYDVLTIENSTTVSGDKTGFALDIQASQ 93

Query: 638 VTAVHKANIMRMSXGLFLRCCRELATKYPDIKFEXRYLXTVCLNMVQDPSKFDVLVMPN 814
           VT V  +++     G  +R        Y  +     Y+ T   + +   S+FD++  PN
Sbjct: 94  VTLVFTSDLTNTFRGFLIR--------YDSVPVGSVYMPTNLCSSILHNSEFDIITSPN 144


>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 612 NWKANSATL---VLASSVISLMDCTTPSTISCSI 520
           NW AN   L   +++ +++  ++CTT  +I+C +
Sbjct: 75  NWNANVTVLGSQLVSGAILEALNCTTDGSITCPL 108


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 612 NWKANSATL---VLASSVISLMDCTTPSTISCSI 520
           NW AN   L   +++ +++  ++CTT  +I+C +
Sbjct: 75  NWNANVTVLGSQLVSGAILEALNCTTDGSITCPL 108


>AF031843-1|AAC13679.1|  579|Caenorhabditis elegans GLY9 protein.
          Length = 579

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 622 FSGELEGELRHSRTGLLRDQLDGLHDSVDDLVL 524
           F G++    +H R GL+R +L G  ++V D+++
Sbjct: 192 FGGKVRLIRKHDRHGLIRAKLAGAREAVGDIIV 224


>AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.19 protein.
          Length = 609

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/75 (26%), Positives = 38/75 (50%)
 Frame = -2

Query: 660 LALCTAVTFFLLFSLANWKANSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVT 481
           L  C +   FL+FSLA        +++ ++++   +    +T   SIP    + +  IVT
Sbjct: 318 LKSCASELGFLVFSLA------MAIIIFATIMYYAEKKVDATRFTSIPS---AFWYTIVT 368

Query: 480 TSTLSYSVLIPSKLL 436
            +TL Y  ++PS ++
Sbjct: 369 LTTLGYGDMVPSTIM 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,149,640
Number of Sequences: 27780
Number of extensions: 411138
Number of successful extensions: 1793
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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