Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_I13
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0178 + 17594062-17595576 75 5e-14
07_01_0692 + 5240429-5240548,5241354-5241512 33 0.22
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 31 0.88
09_03_0042 + 11842263-11842698,11842799-11842896,11843082-118432... 31 1.2
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 31 1.5
03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066... 30 2.0
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 30 2.0
04_04_0350 + 24591002-24591123,24592020-24592091,24592343-245924... 30 2.7
05_01_0164 + 1134815-1134911,1135078-1135278,1135875-1136156,113... 29 3.6
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 29 4.7
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 29 4.7
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 29 4.7
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 29 6.2
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 28 8.2
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 28 8.2
05_05_0270 - 23728986-23729267,23729575-23730120,23730207-237305... 28 8.2
>06_03_0178 + 17594062-17595576
Length = 504
Score = 75.4 bits (177), Expect = 5e-14
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Frame = +2
Query: 311 LEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTE-- 484
L+ED YV + +II+RDFFPDL +L + ++L+A ++D LR+ K R +
Sbjct: 58 LDEDTYVAAVERIIERDFFPDLPRLRDRLDWLQALRSRDPLVLRDAQLKILERRRRAQRQ 117
Query: 485 ----PYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFLAKHTS 652
P TP + + P AT + AP + D D+ SLD F + TS
Sbjct: 118 RQGGPVPTPTPATSTALRSPSFLATPSV-APSVAGDEGADVDDDVEAALSLDDFFRRFTS 176
Query: 653 EDNESYDRVISLEQKKRANKIASQLQ-AEITSATLADEA 766
EDNES+ R++ +R + A L+ E+ A ++A
Sbjct: 177 EDNESFSRILEKVNHRRRERYAHLLEPGEVAKAPQLEDA 215
>07_01_0692 + 5240429-5240548,5241354-5241512
Length = 92
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 624 KLWLSVISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVG 475
K+ L +I +SL F CL + +L V GR+M + + GV+YG G
Sbjct: 36 KILLMIIVTGVSLGVFVTCLVLAFVLDLTVEGRAMVVFTALVGVVYGVAG 85
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 31.5 bits (68), Expect = 0.88
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 560 APRQTKNATKDKTADITDNHSLDSFLAKHTSEDNESYDRVISLEQKKRANKIASQLQAEI 739
APR NA + SLD+ H ED E RA+K+ L+ ++
Sbjct: 430 APRPFGNAVSYVNSAFLARSSLDAASGSHLIEDVRLAFGAFGSEHAIRASKVEEFLKGKL 489
Query: 740 TSATLADEAL-ALPSIEQQADQTERP 814
SA++ EA+ L + A+ T P
Sbjct: 490 VSASVILEAVRLLKGVVSPAEGTTHP 515
>09_03_0042 +
11842263-11842698,11842799-11842896,11843082-11843217,
11843349-11843509,11843603-11843753,11843855-11843952,
11844142-11844277,11844404-11844532,11844622-11844720,
11844814-11844909,11845002-11845100,11845201-11845296,
11846394-11846628,11846752-11846873,11846993-11847114,
11847275-11847345,11847940-11848027,11848374-11848439,
11848676-11848795
Length = 852
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 446 LTQKYSGNRPPTEPYNT---PATFDTPNIDRPCTPATNNEDAPRQTKNATKD 592
L + SG+ PT + T P TFD+ +D TP ++ +A Q++ +T++
Sbjct: 639 LQSELSGSAHPTYDHQTVMRPTTFDSLELDMVDTPTSDVSNAKEQSQGSTRN 690
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 470 RPPTEPYNTPATFDTPNI-DRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFLAKH 646
+ P+ + TP+T TP I R T ++++DAP QTK + +H F A+
Sbjct: 321 KQPSSTFFTPST--TPKIPQRTDTDISSSKDAPYQTKPSETTSKEAHDKSHLSGFFKARS 378
Query: 647 TSEDNESYDRVISLEQKKRANKI 715
+++ + + E K + KI
Sbjct: 379 HTDETATPTKHSPQEDSKTSTKI 401
>03_03_0107 +
14504065-14504448,14504545-14504922,14506011-14506619,
14507110-14507237,14507829-14507832
Length = 500
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 554 EDAPRQTKNATKDKTADITDNHSLDSF---LAKHTSEDNESYDRVISLEQKKRANKIASQ 724
E P++ +N K+K A T+ S +SF K T E+ ++ + E+K+ A K +
Sbjct: 415 EYLPQRKRNGEKEKKAKPTETPSAESFKKGAQKETKEEKKARKAAVK-EEKREARKAKKE 473
Query: 725 LQ 730
L+
Sbjct: 474 LK 475
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Frame = +2
Query: 533 CTPATNNEDAPRQTKNATKDK-TADITDNHSLDSFLAKHTSEDNESYDRVISLEQKKRAN 709
C+P + D QT N+T K T+ +D S + AK D V +E K
Sbjct: 334 CSPVSKTVDRAEQTSNSTVSKPTSPASDGSSGKHYPAKRLKVDVPHLVHVNEMEASKEQQ 393
Query: 710 KIASQ--LQAEITSATLADEALALPSIEQQADQ---TERPHELDTWR 835
A++ AE + + + P D T+ H +D R
Sbjct: 394 PAANETYASAETVQSEVTNSPTKSPCCTSLGDNIACTDNVHGMDMVR 440
>04_04_0350 + 24591002-24591123,24592020-24592091,24592343-24592448,
24593138-24593242,24593693-24593815,24594163-24594630,
24595226-24595351,24595430-24595516,24595615-24595701,
24595807-24595903,24596519-24596636,24596923-24596995,
24597504-24597566,24597666-24597832,24598444-24598631,
24598909-24599057,24599193-24599442,24599597-24599855,
24599977-24600073,24606696-24606776,24606914-24606970,
24607264-24607395,24607476-24607562,24607941-24608049,
24608134-24608270,24608841-24608945,24609566-24609654,
24609757-24609859,24609960-24610064,24610282-24610293,
24611013-24611078
Length = 1279
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 557 DAPRQTKNATKDKTADITDNHSLDSFLAKHTSEDNESYDRVIS--LEQKKRANKIASQLQ 730
D P + D + D D T ED YDRVIS ++++ K QL+
Sbjct: 778 DRPSAVELLQNDLPPRMEDEWLTDVLRMIQTPEDTYVYDRVISTIFDEERLIAKTQCQLE 837
Query: 731 AEITSATLADEALALPSIEQQADQTERPH 817
S +D + L SI + + + + H
Sbjct: 838 GSKKSTCKSDNSELLDSIIEVSKEVFKRH 866
>05_01_0164 +
1134815-1134911,1135078-1135278,1135875-1136156,
1136237-1136271,1136356-1136445,1137228-1137357,
1137400-1138004,1138128-1138562
Length = 624
Score = 29.5 bits (63), Expect = 3.6
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Frame = +2
Query: 509 DTPNIDRPCTPATNNEDAPRQTKNATKDKT-ADITDNHSLDSFLAKHTSE---DNESYDR 676
D+P + R P E+AP Q+++ + K A + SL A TSE D E
Sbjct: 50 DSPEMRRVVDPDGATEEAPEQSESPKRRKAKAGVNLRKSLAWDSAFFTSEGVLDTEELAV 109
Query: 677 VISLEQKKRANK---IASQLQ--AEITSATLADEALALPSIEQQ 793
V S +K + ++ IA +++ E T++TL E+ + ++E +
Sbjct: 110 VNSTFRKAQGSRLPGIAEEMRRSGESTTSTLESESWVMENLETE 153
>10_02_0113 +
5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 821 IHVAFPFDQLVVLWRVKLVLHLRVLQT*S--RLEAAMLFCLH 702
+HV P QLV+ W L+LHL +T S +E AML+ H
Sbjct: 87 LHVDDPRHQLVLFWTPLLLLHLGSQETISAFSIEDAMLWKRH 128
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +2
Query: 497 PATFDTPNIDRPCTPATNNEDAP---RQTKNATKDKTA 601
PA TP RP TP P RQT N+T D A
Sbjct: 134 PARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAA 171
>04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/168 (17%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Frame = +2
Query: 317 EDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNT 496
E + E +++++D + +++N++ + +E+ R R + P+ P ++
Sbjct: 788 EPSSEETTVRLVKKDQTRLVSSADSENDFAKKSESSQ-DRTRSSDKVQLKGFVPSAPKSS 846
Query: 497 PA--TFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFLA-KHTSEDNES 667
T+ + +R P + + ++ HS + + ++
Sbjct: 847 QGSRTYVSSAKNRFIVPKEQLQKTSTEGNAPPGSLQGEVAPLHSRNKAMPLSFYQRKDKI 906
Query: 668 YDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTER 811
+ R I + Q + +++LQ+ T+A+L+DE LAL + QQ + + R
Sbjct: 907 HHRSIHITQDTSNSSASAELQSTETTASLSDEQLAL-LLHQQLNSSPR 953
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 467 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDN 616
N PP P TP T P TP N AP T T N
Sbjct: 292 NLPPLYPEPTPVTMPDPTTTTTPTPFMNPVTAPTMPSPVTNPATTPAVTN 341
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 548 NNEDAPRQTKNATKDKTADITDNHSLDSFLAKHTSEDNESYD 673
N++D + ++ +D + ++ + DS+ +H EDNE D
Sbjct: 336 NDQDEEEEDEDEDEDSYENPFEDENEDSYKGEHEDEDNEDED 377
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 571 LSGSILIVGSRSARPVNVWRVKSGWGVIW 485
L +ILIVG S + W VK+ WG W
Sbjct: 284 LDHAILIVGYGSEGGKDYWIVKNSWGESW 312
>05_05_0270 -
23728986-23729267,23729575-23730120,23730207-23730561,
23731147-23731442,23731665-23731714,23731802-23731904,
23732059-23732148,23732328-23732384,23732571-23732618,
23732725-23732753,23732940-23733087
Length = 667
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -2
Query: 618 WLSVISAVLSLVAFFVCLGASSLLVAGVHGR--SMFGVSKVA-GVLYGSVGG 472
W SV +A +L F+ +G ++ G+H R SM+ + A V GS GG
Sbjct: 16 WRSVAAAAAALALLFLSVGVPLAVLLGLHQRFPSMYLADESAVSVFGGSEGG 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,130,535
Number of Sequences: 37544
Number of extensions: 393765
Number of successful extensions: 1184
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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