Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I10
         (805 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprot...   165   6e-41
AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p pro...   165   6e-41
AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA...   165   6e-41
BT023632-1|AAY85032.1|   95|Drosophila melanogaster IP05684p pro...    51   2e-06
AE014296-355|AAF47567.1|   95|Drosophila melanogaster CG2021-PA ...    51   2e-06
BT022486-1|AAY54902.1|  121|Drosophila melanogaster IP06106p pro...    45   1e-04
AE014134-505|AAN10396.1|  121|Drosophila melanogaster CG31950-PA...    45   1e-04
BT001552-1|AAN71307.1|  103|Drosophila melanogaster RE11655p pro...    42   7e-04
AE014297-3433|AAN13967.1|  103|Drosophila melanogaster CG31184-P...    42   7e-04
AY113521-1|AAM29526.1|   91|Drosophila melanogaster RE60135p pro...    37   0.028
AE014296-1060|AAF50703.1|   91|Drosophila melanogaster CG6610-PA...    37   0.028
BT025925-1|ABG02169.1|  287|Drosophila melanogaster IP12320p pro...    37   0.037
AY113637-1|AAM29642.1|  110|Drosophila melanogaster RH73529p pro...    37   0.037
AE014134-2763|AAF53562.1|  110|Drosophila melanogaster CG13277-P...    37   0.037
AY070698-1|AAL48169.1|   76|Drosophila melanogaster RH35475p pro...    33   0.35 
AE014298-2437|AAF48634.1|   76|Drosophila melanogaster CG9742-PA...    33   0.35 
BT003597-1|AAO39600.1|   94|Drosophila melanogaster GM19936p pro...    33   0.46 
AY069315-1|AAL39460.1|  119|Drosophila melanogaster LD03002p pro...    33   0.46 
AE014297-442|AAF54135.1|  119|Drosophila melanogaster CG1249-PA ...    33   0.46 
AE014134-1360|AAF52576.1|   94|Drosophila melanogaster CG18591-P...    33   0.46 
AE013599-3518|AAN16119.1|  281|Drosophila melanogaster CG32834-P...    31   1.4  
AY119189-1|AAM51049.1|  256|Drosophila melanogaster SD11312p pro...    25   5.5  
AE013599-936|AAF58894.1|  256|Drosophila melanogaster CG12924-PA...    25   5.5  

>L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 199

 Score =  165 bits (401), Expect = 6e-41
 Identities = 86/146 (58%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = +3

Query: 99  MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 278
           MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK  +
Sbjct: 1   MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60

Query: 279 REEKRTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 452
           REEKR LGFVLLRGENIVSLT+                                      
Sbjct: 61  REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120

Query: 453 XXXXXXXXXRGVGGPSQQHMAPGNRG 530
                    RGVGGP+QQHMAP  RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146


>AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p
           protein.
          Length = 199

 Score =  165 bits (401), Expect = 6e-41
 Identities = 86/146 (58%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = +3

Query: 99  MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 278
           MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK  +
Sbjct: 1   MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60

Query: 279 REEKRTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 452
           REEKR LGFVLLRGENIVSLT+                                      
Sbjct: 61  REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120

Query: 453 XXXXXXXXXRGVGGPSQQHMAPGNRG 530
                    RGVGGP+QQHMAP  RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146


>AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA
           protein.
          Length = 199

 Score =  165 bits (401), Expect = 6e-41
 Identities = 86/146 (58%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = +3

Query: 99  MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 278
           MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK  +
Sbjct: 1   MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60

Query: 279 REEKRTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 452
           REEKR LGFVLLRGENIVSLT+                                      
Sbjct: 61  REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120

Query: 453 XXXXXXXXXRGVGGPSQQHMAPGNRG 530
                    RGVGGP+QQHMAP  RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146


>BT023632-1|AAY85032.1|   95|Drosophila melanogaster IP05684p
           protein.
          Length = 95

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = +3

Query: 123 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 302
           ++ +IN+ V +I  D R FIGT K FD+ +N+I+ +C E      +   T    E+  LG
Sbjct: 4   LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE------RVFSTTSGIEQIVLG 57

Query: 303 FVLLRGENI 329
             ++RG+NI
Sbjct: 58  LHIIRGDNI 66


>AE014296-355|AAF47567.1|   95|Drosophila melanogaster CG2021-PA
           protein.
          Length = 95

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = +3

Query: 123 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 302
           ++ +IN+ V +I  D R FIGT K FD+ +N+I+ +C E      +   T    E+  LG
Sbjct: 4   LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE------RVFSTTSGIEQIVLG 57

Query: 303 FVLLRGENI 329
             ++RG+NI
Sbjct: 58  LHIIRGDNI 66


>BT022486-1|AAY54902.1|  121|Drosophila melanogaster IP06106p
           protein.
          Length = 121

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 25/82 (30%), Positives = 46/82 (56%)
 Frame = +3

Query: 99  MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 278
           +T G+  K+Q+ +   +R+++ D R  +G F   D+  N++L  C E+           +
Sbjct: 38  LTPGRR-KLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY---------LVE 87

Query: 279 REEKRTLGFVLLRGENIVSLTI 344
            +E R LG V++ G++IVSL+I
Sbjct: 88  GQEPRLLGNVMVPGQHIVSLSI 109


>AE014134-505|AAN10396.1|  121|Drosophila melanogaster CG31950-PA
           protein.
          Length = 121

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 25/82 (30%), Positives = 46/82 (56%)
 Frame = +3

Query: 99  MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 278
           +T G+  K+Q+ +   +R+++ D R  +G F   D+  N++L  C E+           +
Sbjct: 38  LTPGRR-KLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY---------LVE 87

Query: 279 REEKRTLGFVLLRGENIVSLTI 344
            +E R LG V++ G++IVSL+I
Sbjct: 88  GQEPRLLGNVMVPGQHIVSLSI 109


>BT001552-1|AAN71307.1|  103|Drosophila melanogaster RE11655p
           protein.
          Length = 103

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +3

Query: 135 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGF 305
           ++ +V V +++ R   G   AFD+H+N++LGD EE     +I  +  +   +  KRT+  
Sbjct: 26  LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPM 85

Query: 306 VLLRGENIV 332
           + +RG+ ++
Sbjct: 86  LFVRGDGVI 94


>AE014297-3433|AAN13967.1|  103|Drosophila melanogaster CG31184-PA
           protein.
          Length = 103

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +3

Query: 135 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGF 305
           ++ +V V +++ R   G   AFD+H+N++LGD EE     +I  +  +   +  KRT+  
Sbjct: 26  LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPM 85

Query: 306 VLLRGENIV 332
           + +RG+ ++
Sbjct: 86  LFVRGDGVI 94


>AY113521-1|AAM29526.1|   91|Drosophila melanogaster RE60135p
           protein.
          Length = 91

 Score = 37.1 bits (82), Expect = 0.028
 Identities = 23/87 (26%), Positives = 40/87 (45%)
 Frame = +3

Query: 78  LPNHSDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKS 257
           +P  S+  T+     + + I  R+ +I+++ +  +GT   FD  +N++L D  E+     
Sbjct: 4   VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEY----- 58

Query: 258 KNSKTADREEKRTLGFVLLRGENIVSL 338
               T D      L  +LL G NI  L
Sbjct: 59  --ENTPDGRRITKLDQILLNGNNITML 83


>AE014296-1060|AAF50703.1|   91|Drosophila melanogaster CG6610-PA
           protein.
          Length = 91

 Score = 37.1 bits (82), Expect = 0.028
 Identities = 23/87 (26%), Positives = 40/87 (45%)
 Frame = +3

Query: 78  LPNHSDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKS 257
           +P  S+  T+     + + I  R+ +I+++ +  +GT   FD  +N++L D  E+     
Sbjct: 4   VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEY----- 58

Query: 258 KNSKTADREEKRTLGFVLLRGENIVSL 338
               T D      L  +LL G NI  L
Sbjct: 59  --ENTPDGRRITKLDQILLNGNNITML 83


>BT025925-1|ABG02169.1|  287|Drosophila melanogaster IP12320p
           protein.
          Length = 287

 Score = 36.7 bits (81), Expect = 0.037
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = +3

Query: 123 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 302
           + +++  ++RV     R   G  K +D  +NL+L +  E+ +   +  K  + E+ R+LG
Sbjct: 201 LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTE-EQTRSLG 259

Query: 303 FVLLRGENIV 332
            V+ RG  +V
Sbjct: 260 LVVCRGTALV 269


>AY113637-1|AAM29642.1|  110|Drosophila melanogaster RH73529p
           protein.
          Length = 110

 Score = 36.7 bits (81), Expect = 0.037
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = +3

Query: 123 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 302
           + +++  ++RV     R   G  K +D  +NL+L +  E+ +   +  K  + E+ R+LG
Sbjct: 24  LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTE-EQTRSLG 82

Query: 303 FVLLRGENIV 332
            V+ RG  +V
Sbjct: 83  LVVCRGTALV 92


>AE014134-2763|AAF53562.1|  110|Drosophila melanogaster CG13277-PA
           protein.
          Length = 110

 Score = 36.7 bits (81), Expect = 0.037
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = +3

Query: 123 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 302
           + +++  ++RV     R   G  K +D  +NL+L +  E+ +   +  K  + E+ R+LG
Sbjct: 24  LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTE-EQTRSLG 82

Query: 303 FVLLRGENIV 332
            V+ RG  +V
Sbjct: 83  LVVCRGTALV 92


>AY070698-1|AAL48169.1|   76|Drosophila melanogaster RH35475p
           protein.
          Length = 76

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = +3

Query: 120 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTL 299
           +++++++ R+ + L   R   G  + FD  MN++L D  E  K  +KN+          +
Sbjct: 8   EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNN----------I 57

Query: 300 GFVLLRGENIV 332
           G V++RG +IV
Sbjct: 58  GMVVIRGNSIV 68


>AE014298-2437|AAF48634.1|   76|Drosophila melanogaster CG9742-PA
           protein.
          Length = 76

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = +3

Query: 120 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTL 299
           +++++++ R+ + L   R   G  + FD  MN++L D  E  K  +KN+          +
Sbjct: 8   EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNN----------I 57

Query: 300 GFVLLRGENIV 332
           G V++RG +IV
Sbjct: 58  GMVVIRGNSIV 68


>BT003597-1|AAO39600.1|   94|Drosophila melanogaster GM19936p
           protein.
          Length = 94

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 144 RVRVILQD--SRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLR 317
           RV+V L +  S    G    FD++MNL+L D EE   +K++        ++R LG ++L+
Sbjct: 29  RVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEV-YVKTR--------QRRNLGRIMLK 79

Query: 318 GENI 329
           G+NI
Sbjct: 80  GDNI 83


>AY069315-1|AAL39460.1|  119|Drosophila melanogaster LD03002p
           protein.
          Length = 119

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
 Frame = +3

Query: 138 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF-----RKIKSKNSKTADREEKRTLG 302
           N +V +  ++++  +G  KAFD+H N++L + +E      R  K K  K     + R + 
Sbjct: 38  NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGK-KKVKPVNKDRFIS 96

Query: 303 FVLLRGENIV 332
            + LRG++++
Sbjct: 97  KMFLRGDSVI 106


>AE014297-442|AAF54135.1|  119|Drosophila melanogaster CG1249-PA
           protein.
          Length = 119

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
 Frame = +3

Query: 138 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF-----RKIKSKNSKTADREEKRTLG 302
           N +V +  ++++  +G  KAFD+H N++L + +E      R  K K  K     + R + 
Sbjct: 38  NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGK-KKVKPVNKDRFIS 96

Query: 303 FVLLRGENIV 332
            + LRG++++
Sbjct: 97  KMFLRGDSVI 106


>AE014134-1360|AAF52576.1|   94|Drosophila melanogaster CG18591-PA
           protein.
          Length = 94

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 144 RVRVILQD--SRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLR 317
           RV+V L +  S    G    FD++MNL+L D EE   +K++        ++R LG ++L+
Sbjct: 29  RVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEV-YVKTR--------QRRNLGRIMLK 79

Query: 318 GENI 329
           G+NI
Sbjct: 80  GDNI 83


>AE013599-3518|AAN16119.1|  281|Drosophila melanogaster CG32834-PA
           protein.
          Length = 281

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 563 PHDG-WPSSRNDGSSSWHGSWWAR 631
           P DG W +    GS+SW GSWW R
Sbjct: 138 PDDGSWCTVSGWGSTSWWGSWWDR 161


>AY119189-1|AAM51049.1|  256|Drosophila melanogaster SD11312p
           protein.
          Length = 256

 Score = 25.0 bits (52), Expect(2) = 5.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 258 KNSKTADREEKRTLGFVLLRGENIVSLTI 344
           KN    + E +R L  +L+RGEN+V +++
Sbjct: 224 KNLNRKNVEIRRELPQILIRGENVVLVSL 252



 Score = 23.0 bits (47), Expect(2) = 5.5
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +3

Query: 144 RVRVILQDSRTFIGTFK----AFDKHMNLILGDCEEFRKIKSKN 263
           RVRV+++   +  G+ +    AFDK  NL+L +  E  K +  N
Sbjct: 151 RVRVVIRKHGSVGGSVEGELLAFDKQWNLLLRNVTETWKRRKYN 194


>AE013599-936|AAF58894.1|  256|Drosophila melanogaster CG12924-PA
           protein.
          Length = 256

 Score = 25.0 bits (52), Expect(2) = 5.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 258 KNSKTADREEKRTLGFVLLRGENIVSLTI 344
           KN    + E +R L  +L+RGEN+V +++
Sbjct: 224 KNLNRKNVEIRRELPQILIRGENVVLVSL 252



 Score = 23.0 bits (47), Expect(2) = 5.5
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +3

Query: 144 RVRVILQDSRTFIGTFK----AFDKHMNLILGDCEEFRKIKSKN 263
           RVRV+++   +  G+ +    AFDK  NL+L +  E  K +  N
Sbjct: 151 RVRVVIRKHGSVGGSVEGELLAFDKQWNLLLRNVTETWKRRKYN 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,308,685
Number of Sequences: 53049
Number of extensions: 493487
Number of successful extensions: 1332
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)