Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I08
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    27   0.27 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   4.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.8  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.8  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   7.7  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   7.7  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   7.7  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 568 LIFAIATIFVGALVGLILVCVIDFL 642
           +   + +I VG ++G ILVCV  FL
Sbjct: 44  IALVLGSIIVGTVIGNILVCVAVFL 68


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +2

Query: 632 LTSSIHLRKSTRSLYRDLNL 691
           +TS+IH RKS+++L   +N+
Sbjct: 18  VTSAIHQRKSSKNLEHSMNV 37


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 290 GELVTSTAAVRRGREFLAA 234
           GE++T+  A +RG+E+ AA
Sbjct: 527 GEVITNEEAEKRGKEYDAA 545


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 580 IATIFVGALVGLILVCVIDFLHP 648
           + T+ VGAL GL+ V    ++ P
Sbjct: 295 VGTLIVGALAGLLSVLGYKYITP 317


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 589 IFVGALVGLILVCVIDFLHPPQKVDKKF 672
           IFV   VG I+ C++ + +P  +    +
Sbjct: 43  IFVTGFVGNIITCIVIWRNPSMQTPTNY 70


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 547 LPSWGSYLIFAIATIFVGALVGLILVCV 630
           +P  G YLIFA+  + +   V ++++ V
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNV 331


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 547 LPSWGSYLIFAIATIFVGALVGLILVCV 630
           +P  G YLIFA+  + +   V ++++ V
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNV 331


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 583 ATIFVGALVGLILVCVI 633
           A IFV  LVG +  CV+
Sbjct: 61  AVIFVTGLVGNVSTCVV 77


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 628 VIDFLHPPQKVDKKFISRSELEK 696
           VIDFLH P  ++   I   E  K
Sbjct: 96  VIDFLHDPGLMEASLIGLVERHK 118


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 628 VIDFLHPPQKVDKKFISRSELEK 696
           VIDFLH P  ++   I   E  K
Sbjct: 96  VIDFLHDPGLMEASLIGLVERHK 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,887
Number of Sequences: 438
Number of extensions: 4697
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)