Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_I07
(811 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 132 4e-31
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 97 1e-20
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 79 4e-15
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 68 1e-11
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 66 4e-11
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 65 5e-11
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 60 3e-09
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 47 2e-05
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 36 0.038
11_03_0073 - 9621199-9621312,9621401-9621476,9621553-9621619,962... 33 0.27
08_01_0843 - 8276619-8278991 30 1.9
06_01_0966 - 7439901-7440034,7440529-7440610,7440634-7440927,744... 29 3.3
03_01_0510 + 3841630-3844089,3844235-3844358,3844641-3844786,384... 29 3.3
02_05_0447 + 29096853-29097033,29097812-29098146,29098651-290987... 29 4.4
11_01_0429 - 3288081-3288781,3290038-3290293 29 5.8
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 132 bits (318), Expect = 4e-31
Identities = 78/201 (38%), Positives = 103/201 (51%), Gaps = 9/201 (4%)
Frame = +2
Query: 200 LATKIQQLNENVNPVVFEKLTGVDKGIALCGLNSPKDRNALGFTLIDAMREVNQIIREDT 379
L ++ Q+ PV +KL+ D GI L P+ RNA+G ++ +R + ++ D
Sbjct: 28 LFSRALQILAQQEPVRLQKLSAPDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADA 87
Query: 380 KLSVVIFHSMVPGIFCAGANLKERLKMSDEEVAKFVRGLRETFIEIEDLPMPTIXXXXXX 559
VV+ S VP +FCAGA+LKER MS EV +FV LR TF+ E L +PTI
Sbjct: 88 TAKVVLLASSVPKVFCAGADLKERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVEGA 147
Query: 560 XXXXXXXXXXXCDIRIAADTAKLGLVETGRGLIPG---------AGGTQRLPRTIQLPIA 712
CD+RI + A L ETG +IPG +GGTQRLPR + A
Sbjct: 148 AFGGGLELALSCDLRICGENATFSLPETGLAIIPGYVFKMALYFSGGTQRLPRIVGKSRA 207
Query: 713 KELIFTSRIVSGKEAKALGIV 775
KELIFT R EA +G V
Sbjct: 208 KELIFTGRRFDAVEAVTMGKV 228
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 97.5 bits (232), Expect = 1e-20
Identities = 64/191 (33%), Positives = 92/191 (48%)
Frame = +2
Query: 236 NPVVFEKLTGVDKGIALCGLNSPKDRNALGFTLIDAMREVNQIIREDTKLSVVIFHSMVP 415
+PV KL+ D I L P+ +NA+ + + +R V + + D + VV+ S VP
Sbjct: 33 DPVSLHKLSAPDCEIVELRLERPEVKNAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVP 92
Query: 416 GIFCAGANLKERLKMSDEEVAKFVRGLRETFIEIEDLPMPTIXXXXXXXXXXXXXXXXXC 595
G+FCAGA +++ L +PTI C
Sbjct: 93 GVFCAGA-------------------------DLKALSIPTIAVIEGAALGGGLELALSC 127
Query: 596 DIRIAADTAKLGLVETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGIV 775
D+RI + A LGL ETG +IPGAGGTQRLPR + AKE+IFT R + EA +G+
Sbjct: 128 DLRICGENATLGLPETGLAIIPGAGGTQRLPRIVGRSRAKEMIFTGRRCNATEAVMMGLA 187
Query: 776 NHVVAQDTANK 808
N+ V A++
Sbjct: 188 NYCVPAGEAHE 198
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 79.0 bits (186), Expect = 4e-15
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Frame = +2
Query: 275 GIALCGLNSPKDRNALGFTLIDAM-REVNQIIREDTKLSVVIFHSMVPGIFCAGANLK-- 445
G+A+ +++P NAL +I ++ R+ + +R ++V+ + G F G ++
Sbjct: 14 GVAVITVSNPPV-NALSLDVIASLQRDYGEALRRSDVKAIVL--TGAKGRFSGGFDINAF 70
Query: 446 ERLKMSDEEVAKFVRGLR---ETFIEIEDLPMPTIXXXXXXXXXXXXXXXXXCDIRIAAD 616
++ D V FV L F+ + D P P++ C R++
Sbjct: 71 DKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAAIDGVALGGGLELVMVCHARVSTS 130
Query: 617 TAKLGLVETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGIVNHVVAQD 796
+A+LGL E G+IPG GGTQRLPR + LP A E++ S+ + G EA G+V+ VV+ D
Sbjct: 131 SAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLVDAVVSAD 190
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 593 CDIRIAADTAKLGLVETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGI 772
C RI+ TA+LGL E G+IPG GGTQRLPR + L A E++ S+ + G EA LG+
Sbjct: 126 CHARISTPTAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGL 185
Query: 773 VNHVV-AQDTANKA 811
V+ +V A D N A
Sbjct: 186 VDSLVSADDLVNTA 199
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 65.7 bits (153), Expect = 4e-11
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
Frame = +2
Query: 242 VVFEKLTGVDKGIALCGLNSPKDRNALGFTLIDAMREVNQIIREDTKLSVVIFHSMVPGI 421
++++K G +GIA +N P RNA + + + R+D+ + V+I
Sbjct: 71 ILYDKAVG--EGIAKITINRPDRRNAFRPLTVKELMRAFEDARDDSSIGVIILTGKGTQS 128
Query: 422 FCAGANLKERLKMSDEEVAKFVR-GLRETFIEIEDLPMPTIXXXXXXXXXXXXXXXXXCD 598
FC+G + R + F R + + ++I LP P I CD
Sbjct: 129 FCSGGDQALRDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCD 188
Query: 599 IRIAADTAKLGLVETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGIVN 778
+ IAAD A G G GT + R + A+E+ F SR + EA +G+VN
Sbjct: 189 LTIAADNAIFGQTGPKVGSFDAGYGTSIMSRLVGPKKAREMWFLSRFYTADEADRMGLVN 248
Query: 779 HVV 787
VV
Sbjct: 249 VVV 251
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 65.3 bits (152), Expect = 5e-11
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Frame = +2
Query: 263 GVDKGIALCGLNSPKDRNALGFTLIDAMRE--VNQIIREDTKLSVVIFHSMVPGIFCAGA 436
G D G+A+ + +P NAL +I ++E + R+D K V+ + G FC G
Sbjct: 12 GAD-GVAVVTICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVL---TGAGGKFCGGF 66
Query: 437 NLKERLKMSDEEVAKFVRGLRETFIE--IEDLPMPTIXXXXXXXXXXXXXXXXXCDIRIA 610
++ ++ + + + +E P++ C RI+
Sbjct: 67 DINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHARIS 126
Query: 611 ADTAKLGLVETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGIVNHVVA 790
A+LGL E G+IPG GGTQRLPR + LP A E++ S+ ++ KE K G+V+ + +
Sbjct: 127 TPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDALCS 186
Query: 791 QD 796
D
Sbjct: 187 PD 188
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +2
Query: 593 CDIRIAADTAKLGLVETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGI 772
C RI+ TA+LGL E G+IP GGTQRLPR + L A E++ S+ + +EA L +
Sbjct: 122 CQARISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLAL 181
Query: 773 VNHVVA-QDTANKA 811
++ +V+ D N A
Sbjct: 182 IDAIVSPNDLLNTA 195
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 47.2 bits (107), Expect = 2e-05
Identities = 38/170 (22%), Positives = 73/170 (42%)
Frame = +2
Query: 278 IALCGLNSPKDRNALGFTLIDAMREVNQIIREDTKLSVVIFHSMVPGIFCAGANLKERLK 457
+A+ +N PK NAL ++ ++ + + D ++ V+ FC+G +L +
Sbjct: 23 VAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRGRA-FCSGVDLTAAEE 81
Query: 458 MSDEEVAKFVRGLRETFIEIEDLPMPTIXXXXXXXXXXXXXXXXXCDIRIAADTAKLGLV 637
+ +V + +++E P + CDI +A +AK
Sbjct: 82 VFKGDVKD---PAADPVVQMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAKFIDT 138
Query: 638 ETGRGLIPGAGGTQRLPRTIQLPIAKELIFTSRIVSGKEAKALGIVNHVV 787
G+ P G +Q+L R I A+E+ T ++ + A+ G+VNH+V
Sbjct: 139 HAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIV 188
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 35.9 bits (79), Expect = 0.038
Identities = 44/221 (19%), Positives = 76/221 (34%), Gaps = 4/221 (1%)
Frame = +2
Query: 146 LSKLKLRSFIVRVVNSRNLATKIQQLNENVNPVVFEKLTGVDKGIALCGLNSPKDRNALG 325
L + L VR+ ++ + + + V + GV + + L N PK NAL
Sbjct: 108 LEGVTLTERTVRITGNKKQIEAAKDIIKQAMSQVLVEANGVTRTLVL---NRPKQLNALS 164
Query: 326 FTLIDAMREVNQIIREDTKLSVVIFHSMVPGIFCAGANLKERLKMSDEEVAKF-VRGLRE 502
+I ED + ++I FCAG ++ ++ + + K+ R
Sbjct: 165 SAMITCFLRCFTAYEEDDGVKLLIVKGK-GRAFCAGGDVAAVVRSINNDSWKYGAHFFRN 223
Query: 503 TFI---EIEDLPMPTIXXXXXXXXXXXXXXXXXCDIRIAADTAKLGLVETGRGLIPGAGG 673
F+ I P + R+ D+ + ET GL P G
Sbjct: 224 EFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPDIGA 283
Query: 674 TQRLPRTIQLPIAKELIFTSRIVSGKEAKALGIVNHVVAQD 796
+ L R + + + T + E A G+ H V D
Sbjct: 284 SYFLSRLLGF-YGEYVGLTGVRLDAAEMLACGLATHFVPSD 323
>11_03_0073 -
9621199-9621312,9621401-9621476,9621553-9621619,
9621655-9621751,9621898-9621996,9622348-9622358,
9622716-9622784,9622871-9623195,9623287-9623457,
9623538-9623713,9624173-9624414,9624481-9624542,
9625305-9625340,9626103-9626262,9626372-9626606,
9626694-9626949,9627062-9627176,9628388-9628450,
9628592-9629325
Length = 1035
Score = 33.1 bits (72), Expect = 0.27
Identities = 28/97 (28%), Positives = 41/97 (42%)
Frame = +2
Query: 248 FEKLTGVDKGIALCGLNSPKDRNALGFTLIDAMREVNQIIREDTKLSVVIFHSMVPGIFC 427
F K+ D GI + L S + L I +++ + IR +V + G FC
Sbjct: 4 FCKVRKRDDGIYVLTLASSDGHHYLTTEAITQLKQALERIRSTKARGLVT--TTTSGSFC 61
Query: 428 AGANLKERLKMSDEEVAKFVRGLRETFIEIEDLPMPT 538
G N DE ++ RG+ E + DLPMPT
Sbjct: 62 DGINAVSD-DDDDEPLSSLERGMAEVVRLLLDLPMPT 97
>08_01_0843 - 8276619-8278991
Length = 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 687 GSL-WVPPAPGIRPLPVSTRPSLAVSAAIL 601
GSL W+PP G + +S P+ A SAAIL
Sbjct: 98 GSLQWIPPNQGFQGKVISAAPTSATSAAIL 127
>06_01_0966 -
7439901-7440034,7440529-7440610,7440634-7440927,
7441081-7441308,7442803-7442963,7444518-7444608
Length = 329
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 574 PSTNSHSFHSSYG--WHGQVFDFNKSFSKPSNEFGYLFI 464
P + H FHSSY W ++F+ K+ +P NE G ++I
Sbjct: 66 PKNSVHLFHSSYALHWRSKMFEM-KNIKEPLNE-GNIYI 102
>03_01_0510 +
3841630-3844089,3844235-3844358,3844641-3844786,
3844861-3844958,3845313-3845502
Length = 1005
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 544 CCGRSGCWWRVGISLGM*HQDSSRYC*TRSCRDW*RSYSRCWRYPETTKNYSA 702
C G+ C W + + L M H D + Y + R+ Y W ET + Y A
Sbjct: 757 CLGK--CHWAIYVILHMPHLDDAPYIHEKLIREILSQYCESWSKDETQRVYIA 807
>02_05_0447 +
29096853-29097033,29097812-29098146,29098651-29098782,
29098870-29099142,29099295-29099477
Length = 367
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 705 GS*IVLGSLWVPPAPGIRPLPVSTRPSLAVSA 610
G+ +VL S PPAPG RP P R S+A +A
Sbjct: 7 GASLVLSS---PPAPGARPQPRPARVSVAAAA 35
>11_01_0429 - 3288081-3288781,3290038-3290293
Length = 318
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 678 WVPPAPGIRPLPVSTRPSLAVSAAIL 601
W PPA G PLP ST P+ AA +
Sbjct: 66 WWPPAYGAAPLPPSTSPASHEHAAAM 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,644,091
Number of Sequences: 37544
Number of extensions: 350203
Number of successful extensions: 893
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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