Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_I02
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 61 8e-10
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 57 1e-08
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 51 9e-07
U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z66497-3|CAE48503.1| 363|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 30 2.3
U80030-10|AAG24167.2| 378|Caenorhabditis elegans Serpentine rec... 28 9.4
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = +3
Query: 3 KNHQISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKD 182
K Q+ P E+E ++ HP + D V + D + ELP A VV D + +TEQE+KD VK
Sbjct: 447 KGLQVPPAELEDLLLSHPKIRDCAVIGIPDAKAGELPKAFVVRAD-NTLTEQEVKDFVKP 505
Query: 183 SLSDPKQLRGGVIFLKEMPTTPQLKIDRRKVKE 281
+S KQL GGV F++E+P + KI RR +++
Sbjct: 506 KVSPYKQLEGGVEFIEEIPKSAAGKILRRFLRD 538
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/91 (40%), Positives = 51/91 (56%)
Frame = +3
Query: 12 QISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKDSLS 191
Q+ P+EIE V+ HP V D V + D Q+ E P A +V KD H +TE E+ D V LS
Sbjct: 451 QVPPVEIEDVLLLHPKVKDCAVIGIPDEQKGESPRAYIVKKD-HTLTEAELSDFVHKMLS 509
Query: 192 DPKQLRGGVIFLKEMPTTPQLKIDRRKVKEL 284
K + F+ +P P KI R+K+KE+
Sbjct: 510 SYKWI-DTYEFIDAIPKLPSGKIQRKKLKEM 539
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 61.3 bits (142), Expect = 8e-10
Identities = 35/91 (38%), Positives = 51/91 (56%)
Frame = +3
Query: 12 QISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKDSLS 191
Q+ P+EIE V+ HP V D V V D + E P A +V KD H +TE E+ + V+ LS
Sbjct: 451 QVPPVEIEDVLLLHPKVKDCAVIGVPDEHKGESPKAYIVKKD-HTLTEAELTEFVRQKLS 509
Query: 192 DPKQLRGGVIFLKEMPTTPQLKIDRRKVKEL 284
K + F+ +P P KI R+K+K++
Sbjct: 510 SYKWI-DTYEFIDSIPKLPSGKIQRKKLKKM 539
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +3
Query: 9 HQISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDG--HRVTEQEIKDLVKD 182
+Q+SP EIE VI P V +V V + D +LP A +VL+ + + ++ +K+
Sbjct: 404 YQVSPTEIENVILTLPKVAEVAVVGIEDELCGQLPKAYIVLEKNADELLFLKHLEHTMKE 463
Query: 183 SLSDPKQLRGGVIFLKEMPTTPQLKIDRRKV 275
LS KQLRGGV +KEMP + KI + ++
Sbjct: 464 KLSAVKQLRGGVSIIKEMPKSSSGKIQKNRL 494
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 KNHQISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRV-TEQEIKDLVK 179
K I P E+E V+R H G+ D V D E+P A VV H + E++ V
Sbjct: 492 KGTMICPSEVELVLRAHAGIDDCAVVGRQDHVTGEVPAAFVVKNAQHPLLASAEVRQYVS 551
Query: 180 DSLSDPKQLRGGVIFLKEMPTTPQLKIDRRKVKE 281
++ K+LRGGV F+ E+P + KI RR +++
Sbjct: 552 GKIATFKELRGGVFFISEIPRSVCGKILRRNLRQ 585
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 51.2 bits (117), Expect = 9e-07
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +3
Query: 12 QISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRV-TEQEIKDLVKDSL 188
Q++P E+E VI +H V DV V V D E P ACVV K G + T + I + L
Sbjct: 441 QVAPAELESVILEHDDVADVCVFGVDDASSGERPVACVVSKRGRDMETSKAIMKHINQKL 500
Query: 189 SDPKQLRGGVIFLKEMPTTPQLKIDRRKVKELVIN 293
+ K ++ + F+ E+ T K+ RR +K+ ++
Sbjct: 501 ARYKHIK-EIEFVSEIMRTGTGKLLRRAMKKAFLD 534
>U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical
protein C32E8.6a protein.
Length = 461
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +3
Query: 12 QISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKDSLS 191
Q++P E+E VIR+ GVLD V Q +E A ++ G+ ++ +I +VKD+L+
Sbjct: 382 QVNPNEVEDVIRKVEGVLDCAV-----YQNQEKLTAKII---GNPDSKADIFKIVKDNLA 433
Query: 192 DPKQLRGGVIFLKEMPTTPQLKIDR 266
KQL VIF++E+P P K+ R
Sbjct: 434 SYKQL-DDVIFVEELPRNPSGKLVR 457
>Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical
protein F25C8.4 protein.
Length = 550
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 9 HQISPLEIEKVIRQHPGVLDVIVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKDSL 188
+Q+ P EIE ++ H V + V ++ + E P A VVLK G TE ++KD V +
Sbjct: 431 YQVIPKEIETLLLTHQAVEEAAVVAINNELSGERPVAFVVLKKGFVATEDDLKDYVNKRV 490
Query: 189 SDPKQL 206
K L
Sbjct: 491 IRYKHL 496
>Z66497-3|CAE48503.1| 363|Caenorhabditis elegans Hypothetical
protein K08F8.1c protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 72 IVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKDSLSDPKQLRGGVIFLKEMPTTPQ 251
I T++ +E C V DG V E+E D V + L PK +R FL++ P+
Sbjct: 258 ITTAIAIPGADESECGGGVFDDGFIVEEEETPDTVAEILPVPKSVR----FLRDGVKAPR 313
Query: 252 L 254
L
Sbjct: 314 L 314
>Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical
protein K08F8.1a protein.
Length = 521
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 72 IVTSVTDVQREELPCACVVLKDGHRVTEQEIKDLVKDSLSDPKQLRGGVIFLKEMPTTPQ 251
I T++ +E C V DG V E+E D V + L PK +R FL++ P+
Sbjct: 416 ITTAIAIPGADESECGGGVFDDGFIVEEEETPDTVAEILPVPKSVR----FLRDGVKAPR 471
Query: 252 L 254
L
Sbjct: 472 L 472
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = -1
Query: 193 SESESLTKSLISCSVTRCPSLSTTQAHGS---SSRWTSVTLVTITSNTP 56
SESES ++S +S S T S+++A+GS S + +S + TI+ TP
Sbjct: 241 SESESKSESQVSSSKTSTSKASSSKAYGSDFESEKSSSSSASTISKVTP 289
>U80030-10|AAG24167.2| 378|Caenorhabditis elegans Serpentine
receptor, class w protein136 protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 480 VSVITDGFRSLVIFKFYYPIRMFLDV*PGFKSEKTR 587
V++I D S +I F +PI FL V FK+EK+R
Sbjct: 218 VAIIMDALISNIIPCFLFPIVTFLLVKELFKTEKSR 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,562,132
Number of Sequences: 27780
Number of extensions: 315872
Number of successful extensions: 741
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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