Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_I01
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   0.72 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    25   3.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   6.7  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -3

Query: 599 QNGSRLSPEKQEMTFISQLRTP----LIDTGHLCLPCSRLLK 486
           Q+   L+P K EMT IS L+ P     ID     +P SR +K
Sbjct: 710 QHHLELAPAKTEMTIISSLKHPPSHISIDVRGTAVPYSRSIK 751


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 304 SCLLFMFWK--CMFVSIYTLLIILLALRFCVIYIFKFS 411
           +C +F+F +  C+++S   L+ + L   F VIY  + S
Sbjct: 149 ACKVFLFMRAFCLYLSSNVLVCVSLDRCFAVIYPLRVS 186


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 599 QNGSRLSPEKQEMTFISQLRTP 534
           Q+G  L+P K E   IS  +TP
Sbjct: 751 QHGLELAPAKTEAVLISSKKTP 772


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,492
Number of Sequences: 2352
Number of extensions: 14966
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)