Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H24
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 35 0.35
AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domai... 35 0.35
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 35 0.35
AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domai... 35 0.35
AK055948-1|BAB71052.1| 671|Homo sapiens protein ( Homo sapiens ... 35 0.35
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein. 35 0.35
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 33 1.1
AL353678-1|CAH71514.1| 395|Homo sapiens zinc finger, CCHC domai... 33 1.1
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 33 1.1
AL137849-1|CAI14918.1| 395|Homo sapiens zinc finger, CCHC domai... 33 1.1
AK023471-1|BAB14584.1| 395|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain c... 30 7.6
AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein pr... 30 7.6
AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein. 30 7.6
AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein. 30 7.6
AK022188-1|BAB13981.1| 582|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens ... 30 7.6
AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA pol... 30 7.6
>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 205 DIEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVD-CYA----QLPEGEIPSSRTVIQARNR 369
++E ++ +PG + F D+D C + EG + RT+ +
Sbjct: 1028 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG-LDCVRTIEELARV 1086
Query: 370 LRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 1087 LRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 1121
>AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 205 DIEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVD-CYA----QLPEGEIPSSRTVIQARNR 369
++E ++ +PG + F D+D C + EG + RT+ +
Sbjct: 317 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG-LDCVRTIEELARV 375
Query: 370 LRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 376 LRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 410
>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 205 DIEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVD-CYA----QLPEGEIPSSRTVIQARNR 369
++E ++ +PG + F D+D C + EG + RT+ +
Sbjct: 1028 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG-LDCVRTIEELARV 1086
Query: 370 LRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 1087 LRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 1121
>AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 205 DIEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVD-CYA----QLPEGEIPSSRTVIQARNR 369
++E ++ +PG + F D+D C + EG + RT+ +
Sbjct: 317 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG-LDCVRTIEELARV 375
Query: 370 LRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 376 LRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 410
>AK055948-1|BAB71052.1| 671|Homo sapiens protein ( Homo sapiens
cDNA FLJ31386 fis, clone NT2NE1000014, weakly similar to
Schizosaccharomyces pombe caffeine-induced death protein
1 ).
Length = 671
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 205 DIEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVD-CYA----QLPEGEIPSSRTVIQARNR 369
++E ++ +PG + F D+D C + EG + RT+ +
Sbjct: 317 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG-LDCVRTIEELARV 375
Query: 370 LRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 376 LRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 410
>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
Length = 1090
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 205 DIEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVD-CYA----QLPEGEIPSSRTVIQARNR 369
++E ++ +PG + F D+D C + EG + RT+ +
Sbjct: 623 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG-LDCVRTIEELARV 681
Query: 370 LRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 682 LRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 716
>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 343 RTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
RT+ + LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 842 RTIEELARVLRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 885
>AL353678-1|CAH71514.1| 395|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 395
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 343 RTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
RT+ + LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 16 RTIEELARVLRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 59
>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 343 RTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
RT+ + LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 842 RTIEELARVLRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 885
>AL137849-1|CAI14918.1| 395|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 395
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 343 RTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
RT+ + LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 16 RTIEELARVLRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 59
>AK023471-1|BAB14584.1| 395|Homo sapiens protein ( Homo sapiens
cDNA FLJ13409 fis, clone PLACE1001716. ).
Length = 395
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 343 RTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDIN 477
RT+ + LR+ + + ITTAKVP++K +H+ +G DI+
Sbjct: 16 RTIEELARVLRKHSGL-RNILPITTAKVPIVKFFHLRSGLEVDIS 59
>BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain
containing 1 protein.
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein
protein.
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AK022188-1|BAB13981.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ12126 fis, clone MAMMA1000163. ).
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ10486 fis, clone NT2RP2000205. ).
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
>AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA
polymerase protein.
Length = 582
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 501 NNESLYKLLGGFFSYYGTFDFEENII 578
N E+L LL FF Y+G F F++N I
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI 458
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,681,647
Number of Sequences: 237096
Number of extensions: 2301278
Number of successful extensions: 4534
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4534
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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