Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H24
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z68003-1|CAA91975.1|  664|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U76403-1|AAB39735.1|  664|Caenorhabditis elegans degenerin protein.    30   1.5  
Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical ...    29   2.6  
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U80448-10|AAB37823.1|  482|Caenorhabditis elegans Hypothetical p...    28   8.0  

>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
            K10D2.3 protein.
          Length = 1425

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
 Frame = +1

Query: 295  DVDCYAQLPEGEIP----SSRTVIQARNRLRQFPHIFTELFAITTAKVPVLKC-YHIPTG 459
            D+D   +  +G++P    +++ VIQ    + +  H+   + AI TAKVP++K    +  G
Sbjct: 1067 DIDICLRFGDGDVPPKDLTAKEVIQKTESVLRKCHLVKRVQAIVTAKVPIVKFQVKLSNG 1126

Query: 460  YHCDINFTSLSGLLIMN 510
               D++ +  + L I N
Sbjct: 1127 AIIDVDISYYNILAIYN 1143



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 501  NNESLYKLLGGFFSYYGTFDFEENII 578
            N ES  +LL G+F YY  FDF   ++
Sbjct: 1242 NKESCAQLLIGYFDYYSRFDFRNFVV 1267


>Z68003-1|CAA91975.1|  664|Caenorhabditis elegans Hypothetical
           protein E02H4.1 protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +3

Query: 339 KQDSHTGTQQTETIPTYFH*IICYNHSKSASTEMLPHTNWLPL*YQ--FYEFVRITNNES 512
           +QD +T T      P+      C NHSK  ++ +  H   + + Y+   YE +R + + S
Sbjct: 538 QQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSYLREHAAMIEIYYEQMSYEILRESESYS 597

Query: 513 LYKLLGGFFSYYGTF 557
            + L+       G F
Sbjct: 598 WFNLMADMGGQAGLF 612


>U76403-1|AAB39735.1|  664|Caenorhabditis elegans degenerin protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +3

Query: 339 KQDSHTGTQQTETIPTYFH*IICYNHSKSASTEMLPHTNWLPL*YQ--FYEFVRITNNES 512
           +QD +T T      P+      C NHSK  ++ +  H   + + Y+   YE +R + + S
Sbjct: 538 QQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSYLREHAAMIEIYYEQMSYEILRESESYS 597

Query: 513 LYKLLGGFFSYYGTF 557
            + L+       G F
Sbjct: 598 WFNLMADMGGQAGLF 612


>Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical
           protein F09B12.2 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 693 CPVAMVCILQRQHYVDIRKNLLRISQSFFFLSEILNMDIL 574
           CPV  VCIL+R H+       +      +F++ ++N+ I+
Sbjct: 119 CPVCDVCILRRDHHCSFGAVCVGHFNQRYFVAAVINLFIM 158


>AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical
           protein Y26D4A.14 protein.
          Length = 952

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 675 CILQRQHYVDIRKNLLRISQSFF--FLSEILNMDILY 571
           C    Q+Y+ + KN +R + +FF  F  + LN+D +Y
Sbjct: 866 CFYISQNYIKLPKNTIRENANFFIVFTQDKLNLDYIY 902


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 675 CILQRQHYVDIRKNLLRISQSFF--FLSEILNMDILY 571
           C    Q+Y+ + KN +R + +FF  F  + LN+D +Y
Sbjct: 830 CFYISQNYIKLPKNTIRENANFFIVFTQDKLNLDYIY 866


>Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 501 NNESLYKLLGGFFSYYGTFDF 563
           N  SL +LL GFF YY  FDF
Sbjct: 707 NTWSLGELLIGFFQYYNEFDF 727


>Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 501 NNESLYKLLGGFFSYYGTFDF 563
           N  SL +LL GFF YY  FDF
Sbjct: 704 NTWSLGELLIGFFQYYNEFDF 724


>Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 501 NNESLYKLLGGFFSYYGTFDF 563
           N  SL +LL GFF YY  FDF
Sbjct: 707 NTWSLGELLIGFFQYYNEFDF 727


>Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 501 NNESLYKLLGGFFSYYGTFDF 563
           N  SL +LL GFF YY  FDF
Sbjct: 704 NTWSLGELLIGFFQYYNEFDF 724


>U80448-10|AAB37823.1|  482|Caenorhabditis elegans Hypothetical
           protein F59A3.9 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 501 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKK 611
           N  SL  L  GF  YY  F+F+ N I    G  ++KK
Sbjct: 285 NTSSLAVLFIGFMKYYSEFNFKWNWISIKHGNVLKKK 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,453,938
Number of Sequences: 27780
Number of extensions: 366465
Number of successful extensions: 919
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)