Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H22
(769 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whol... 245 1e-63
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 238 1e-61
UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: C... 233 4e-60
UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:... 227 2e-58
UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis thalia... 226 5e-58
UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genom... 225 9e-58
UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4; Ostre... 149 2e-51
UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella ve... 165 1e-39
UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whol... 153 5e-36
UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|R... 144 3e-33
UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-... 140 3e-32
UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4; Pezizomy... 110 4e-23
UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1; ... 109 7e-23
UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella ve... 99 6e-20
UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family... 86 1e-15
UniRef50_Q41CV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 81 2e-14
UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular organ... 81 3e-14
UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 80 7e-14
UniRef50_Q8EBW1 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 79 1e-13
UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 79 1e-13
UniRef50_Q84KJ5 Cluster: Cryptochrome DASH, chloroplast/mitochon... 79 2e-13
UniRef50_A3Y1I2 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 78 2e-13
UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family... 77 6e-13
UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 75 1e-12
UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 75 1e-12
UniRef50_Q6FCZ9 Cluster: Deoxyribodipyrimidine photolyase (Photo... 75 3e-12
UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 75 3e-12
UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 74 3e-12
UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolya... 73 8e-12
UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA photoly... 73 1e-11
UniRef50_A3D723 Cluster: Deoxyribodipyrimidine photo-lyase; n=8;... 73 1e-11
UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 72 2e-11
UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 71 2e-11
UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;... 71 2e-11
UniRef50_A6VUF2 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 71 3e-11
UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genom... 71 3e-11
UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 71 4e-11
UniRef50_Q04449 Cluster: Deoxyribodipyrimidine photo-lyase; n=13... 71 4e-11
UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 70 6e-11
UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 70 6e-11
UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 70 6e-11
UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 70 6e-11
UniRef50_Q5IFN2 Cluster: Cryptochrome DASH, chloroplast/mitochon... 70 6e-11
UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whol... 69 1e-10
UniRef50_A3QCZ8 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 69 1e-10
UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolya... 69 2e-10
UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 68 2e-10
UniRef50_Q7UJB1 Cluster: Cryptochrome DASH; n=7; cellular organi... 68 2e-10
UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_Q9KNA8 Cluster: Deoxyribodipyrimidine photo-lyase; n=25... 68 3e-10
UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15... 66 7e-10
UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 66 9e-10
UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family... 66 1e-09
UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;... 65 2e-09
UniRef50_Q6BZK7 Cluster: Similar to tr|O93963 Trichoderma harzia... 65 2e-09
UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;... 65 2e-09
UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 64 4e-09
UniRef50_A6DFN1 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 64 4e-09
UniRef50_A4CAK2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 64 4e-09
UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43... 64 4e-09
UniRef50_Q89AJ9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 64 5e-09
UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class ... 63 6e-09
UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 63 6e-09
UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1; Aphroc... 63 6e-09
UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain prot... 63 8e-09
UniRef50_Q9HVD2 Cluster: Deoxyribodipyrimidine photolyase; n=22;... 62 1e-08
UniRef50_A7HMU7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 62 1e-08
UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 62 1e-08
UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas mobilis|... 62 1e-08
UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 62 1e-08
UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;... 62 1e-08
UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 62 1e-08
UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11... 62 1e-08
UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 62 1e-08
UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4; Gammaproteobact... 62 2e-08
UniRef50_Q1VN24 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 61 3e-08
UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 61 3e-08
UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus Pr... 61 3e-08
UniRef50_A4TUK0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 61 3e-08
UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 - Ch... 61 3e-08
UniRef50_Q97VY1 Cluster: Deoxyribodipyrimidine photolyase (DNA p... 61 3e-08
UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia gloss... 60 4e-08
UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia brevis|... 60 4e-08
UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 60 4e-08
UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 60 6e-08
UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase, putat... 60 6e-08
UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 60 8e-08
UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 60 8e-08
UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 60 8e-08
UniRef50_Q5QV18 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 59 1e-07
UniRef50_Q5DZH3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 59 1e-07
UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 59 1e-07
UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 59 1e-07
UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax borkum... 59 1e-07
UniRef50_A7D4K1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 59 1e-07
UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;... 59 1e-07
UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16... 59 1e-07
UniRef50_Q2G0A6 Cluster: Deoxyribodipyrimidine photolyase, putat... 58 2e-07
UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 58 2e-07
UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class ... 58 2e-07
UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family... 58 2e-07
UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 58 2e-07
UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family... 58 3e-07
UniRef50_Q21MT8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 58 3e-07
UniRef50_A6WVR6 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 58 3e-07
UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 58 3e-07
UniRef50_Q0I8L2 Cluster: Deoxyribodipyrimidine photolyase family... 57 4e-07
UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica r... 57 4e-07
UniRef50_Q9KK82 Cluster: Hypothetical DNA photolyase; n=3; Actin... 57 6e-07
UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family... 56 7e-07
UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6; ... 56 7e-07
UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 56 1e-06
UniRef50_Q5V0Z1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 56 1e-06
UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:... 56 1e-06
UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 56 1e-06
UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 56 1e-06
UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 56 1e-06
UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 55 2e-06
UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 55 2e-06
UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22; Gammaproteobac... 55 2e-06
UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolya... 54 3e-06
UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3; Halobacte... 54 3e-06
UniRef50_Q4T4M6 Cluster: Chromosome undetermined SCAF9582, whole... 54 4e-06
UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 54 4e-06
UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase fa... 54 4e-06
UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 54 5e-06
UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase... 53 7e-06
UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class ... 53 9e-06
UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4; rosids... 53 9e-06
UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 52 1e-05
UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q14N08 Cluster: Putative deoxyribodipyrimidine photolya... 52 2e-05
UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 52 2e-05
UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 52 2e-05
UniRef50_A4S782 Cluster: Predicted protein; n=3; Ostreococcus|Re... 52 2e-05
UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 52 2e-05
UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 52 2e-05
UniRef50_P61496 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 52 2e-05
UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24... 51 3e-05
UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep: ... 51 4e-05
UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 50 5e-05
UniRef50_A0UAX4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 50 5e-05
UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyas... 50 6e-05
UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 50 6e-05
UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 50 8e-05
UniRef50_A5GT79 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 50 8e-05
UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 49 1e-04
UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase, mito... 49 1e-04
UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 49 1e-04
UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 49 1e-04
UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 49 1e-04
UniRef50_Q2S3L9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 48 3e-04
UniRef50_A6GPG1 Cluster: Deoxyribodipyrimidine photolyase family... 48 3e-04
UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 48 3e-04
UniRef50_Q31DQ9 Cluster: Deoxyribodipyrimidine photolyase family... 48 3e-04
UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 48 3e-04
UniRef50_A3JBH1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 47 4e-04
UniRef50_A3JA18 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 47 4e-04
UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 47 4e-04
UniRef50_Q7M8M8 Cluster: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA PH... 46 8e-04
UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;... 46 0.001
UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6; Xanthomon... 46 0.001
UniRef50_Q4E3Z7 Cluster: DNA photolyase, putative; n=4; Trypanos... 46 0.001
UniRef50_A0YDZ0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 46 0.001
UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12... 45 0.002
UniRef50_A0HIH4 Cluster: DNA photolyase, FAD-binding; n=1; Comam... 45 0.002
UniRef50_Q4P1U6 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase... 44 0.004
UniRef50_A3Z202 Cluster: Deoxyribodipyrimidine photolyase-relate... 44 0.004
UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.004
UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 44 0.006
UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 44 0.006
UniRef50_Q4Q4G2 Cluster: Deoxyribodipyrimidine photolyase, putat... 44 0.006
UniRef50_Q4FNW5 Cluster: Deoxyribodipyrimidine photolyase-relate... 43 0.007
UniRef50_Q9RIY2 Cluster: Deoxiribopirymidine photolyase; n=1; St... 42 0.013
UniRef50_Q389M9 Cluster: Deoxyribodipyrimidine photolyase, putat... 42 0.013
UniRef50_Q9KS67 Cluster: Cryptochrome-like protein cry2; n=15; G... 42 0.022
UniRef50_Q2S050 Cluster: Deoxyribodipyrimidine photolyase, putat... 41 0.029
UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase, putat... 40 0.051
UniRef50_Q4QHY9 Cluster: DNA photolyase, putative; n=3; Leishman... 40 0.068
UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 40 0.090
UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 40 0.090
UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protei... 39 0.16
UniRef50_Q1J4U4 Cluster: NlpC/P60 family protein; n=1; Streptoco... 39 0.16
UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2; Ara... 38 0.27
UniRef50_A3I0F4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_Q9KR11 Cluster: Protein tolB precursor; n=59; Proteobac... 36 0.84
UniRef50_UPI00006CBB71 Cluster: hypothetical protein TTHERM_0056... 36 1.1
UniRef50_A5GIC8 Cluster: FAD binding domain of DNA photolyase; n... 36 1.5
UniRef50_Q8FRW1 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 35 1.9
UniRef50_A7B5Z5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q4P1N8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_UPI00015C60C8 Cluster: hypothetical protein CKO_03947; ... 34 3.4
UniRef50_Q5ZW53 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_Q5BW19 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A6GV05 Cluster: Probable deoxyribodipyrimidine photolya... 34 4.5
UniRef50_A1IU21 Cluster: Deoxyribodopyrimidine photolyase; n=3; ... 34 4.5
UniRef50_Q4VPF3 Cluster: Phantastica transcription factor b; n=1... 34 4.5
UniRef50_A0CC18 Cluster: Chromosome undetermined scaffold_166, w... 34 4.5
UniRef50_Q7SI68 Cluster: Putative cryptochrome DASH, mitochondri... 34 4.5
UniRef50_Q132Y4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q7RF74 Cluster: Streptococcus pyogenes AMV156, putative... 33 5.9
UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;... 33 5.9
UniRef50_A5UV21 Cluster: Hydantoinase B/oxoprolinase; n=2; Rosei... 33 7.8
UniRef50_Q4U9S5 Cluster: Phosphatidylinositol 4-kinase, putative... 33 7.8
UniRef50_A7RQH2 Cluster: Predicted protein; n=3; Nematostella ve... 33 7.8
UniRef50_A2GIK0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_A2DFS8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_A7TPZ6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14682,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 606
Score = 245 bits (599), Expect = 1e-63
Identities = 117/256 (45%), Positives = 169/256 (66%), Gaps = 5/256 (1%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D +P ++D I+ +A++ GV + ++ HT+YD+ K++ N G PLTY++F +L+ +
Sbjct: 68 DSEPFGKERDAAIKKLAKEAGVEVIVKISHTLYDLDKIIELNGGQPPLTYKRFQTLISRM 127
Query: 193 NVKE-PIE-ISNVLSSHC-KPI-DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKR 360
+ E P+E +S L C PI + E + +P+L+EL D E L + GGETEAL R
Sbjct: 128 DPPEMPVEMLSGNLMGRCVTPISEDHGEKFGVPSLEELGFDIEGLPSAVWPGGETEALTR 187
Query: 361 LNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGRQHT 537
+ ++ +K WV FE+P + NS+ S T LSPY+ GCLS +LFY KL ++ +++T
Sbjct: 188 IERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNT 247
Query: 538 LPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFV 717
PP+SL GQL+WREF+YTA T FDKM GN IC++IPW +N L WAE KTG+P++
Sbjct: 248 SPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVRIPWDRNMEALAKWAEAKTGFPWI 307
Query: 718 DAIMRQLKQEGWIHHL 765
DAIM QL+QEGWIHHL
Sbjct: 308 DAIMTQLRQEGWIHHL 323
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 238 bits (582), Expect = 1e-61
Identities = 111/256 (43%), Positives = 166/256 (64%), Gaps = 5/256 (1%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D +P ++D I +A++ GV + HT+YD+ +++ N PLTY++F +++ +
Sbjct: 120 DSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRM 179
Query: 193 NV-KEPIEISNVLSSHCKPIDIQS---ENYSIPNLKELQIDEETLAPVKYHGGETEALKR 360
+ K+P+ + +IQ E Y +P+L+EL E L P + GGETEAL R
Sbjct: 180 ELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALAR 239
Query: 361 LNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGRQHT 537
L+ ++ +K WV +E+P + NS+ S T LSPY+ GCLS +LFY++L ++ + ++++
Sbjct: 240 LDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNS 299
Query: 538 LPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFV 717
PP+SL GQL+WREF+YTA T FD+M GN ICIQIPW +N L WAEGKTG+P++
Sbjct: 300 TPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWI 359
Query: 718 DAIMRQLKQEGWIHHL 765
DAIM QL+QEGWIHHL
Sbjct: 360 DAIMTQLRQEGWIHHL 375
>UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: Cry4
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 579
Score = 233 bits (570), Expect = 4e-60
Identities = 108/255 (42%), Positives = 166/255 (65%), Gaps = 4/255 (1%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
+++P + + D+ I+ +A++ G+ + HT+YDV ++++ N G+ PLTY+KFL ++ +
Sbjct: 123 EVEPYYTRMDKDIQTVAQENGLQTYTCISHTLYDVKRIVKANGGSPPLTYKKFLHVLSVL 182
Query: 193 NVKE-PI-EISNVLSSHC-KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRL 363
E P ++S C P+D+ Y++P+L +L + E A V + GGE+ AL+RL
Sbjct: 183 GEPEKPARDVSIEDFQRCVTPVDVDRV-YAVPSLADLGLQVE--AEVLWPGGESHALQRL 239
Query: 364 NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGRQHTL 540
+ + WV F KP + PNS+ PSTT LSPY+S GCLS + FYH+L + + H+L
Sbjct: 240 EKHFQSQGWVANFSKPRTIPNSLLPSTTGLSPYLSLGCLSVRTFYHRLNSIYAQSKNHSL 299
Query: 541 PPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVD 720
PPVSL GQ++WREF+YT + +F KM GN+IC+QI W + L+ W +TG+P++D
Sbjct: 300 PPVSLQGQVLWREFFYTVASATPNFTKMEGNSICLQIDWYHDPERLEKWRTAQTGFPWID 359
Query: 721 AIMRQLKQEGWIHHL 765
AIM QL+QEGWIHHL
Sbjct: 360 AIMTQLRQEGWIHHL 374
>UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:
6-4 photolyase - Dunaliella salina
Length = 600
Score = 227 bits (556), Expect = 2e-58
Identities = 112/258 (43%), Positives = 156/258 (60%), Gaps = 7/258 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D +P +D ++D+A + GV + K HT+YD ++REN G PLT Q F LV +
Sbjct: 149 DTEPYAKARDARVDDMAREAGVEVKKHWSHTLYDTDMLVRENKGKAPLTMQAFEKLVDRV 208
Query: 193 NVKEPIEISNVLSSHCKPID-----IQSENYSIPNLKELQIDEETLAPVKYHGGETEALK 357
P+ ++ P+D I+ +P +E+ E A K GGETEALK
Sbjct: 209 G--HPLTALPAPTARLPPVDVSLPGIKDAEVGVPTWQEMGFKEAPTAIFK--GGETEALK 264
Query: 358 RLNLYMSKKEWVCKFEKPNSSPNSI-EPSTTVLSPYISHGCLSAKLFYHKLKEVENGR-Q 531
RL YM +W FEKP++ P++ EPSTT LSPY+ GCLSA+ F+ +L +V +
Sbjct: 265 RLEHYMKDTKWXASFEKPSTDPSAFTEPSTTALSPYLKFGCLSARFFHQRLLDVYRLHPK 324
Query: 532 HTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYP 711
H+ PP+SL GQL+WREF+YT G+ +FD++ GN IC QI W N A LKAW +G TGYP
Sbjct: 325 HSQPPMSLRGQLLWREFFYTLGSHTPNFDRIAGNPICRQITWDTNPALLKAWRDGATGYP 384
Query: 712 FVDAIMRQLKQEGWIHHL 765
++DA M QL++ GW+HHL
Sbjct: 385 WIDAAMTQLREWGWMHHL 402
>UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis
thaliana|Rep: 6-4 photolyase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 537
Score = 226 bits (552), Expect = 5e-58
Identities = 113/256 (44%), Positives = 163/256 (63%), Gaps = 5/256 (1%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D DP + D ++D A GV + V HT+++ ++ +N G PL+YQ FL +
Sbjct: 112 DTDPYYQALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEP 171
Query: 193 NVKEPIEISNVLSSHCKPI-DIQSENYS-IPNLKELQI-DEETLAPVKYHGGETEALKRL 363
+ + + + S PI DI + S +P+L+EL D+E + GGE+EALKRL
Sbjct: 172 SCAKSELVMSY--SSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRL 229
Query: 364 NLYMSKKEWVCKFEKPNSSPNS-IEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGRQHT 537
+S K WV FEKP P++ ++P+TTV+SPY+ GCLS++ FY L+ + ++ ++HT
Sbjct: 230 TKSISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHT 289
Query: 538 LPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFV 717
PPVSL+GQL+WREF+YT G +FDKM GN IC QIPW ++ A L AW +GKTGYP++
Sbjct: 290 SPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWI 349
Query: 718 DAIMRQLKQEGWIHHL 765
DAIM QL + GW+HHL
Sbjct: 350 DAIMVQLLKWGWMHHL 365
>UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 547
Score = 225 bits (550), Expect = 9e-58
Identities = 113/258 (43%), Positives = 166/258 (64%), Gaps = 7/258 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D DP + D +++ A G+ + V HT++D +++++N G PL+YQ FL L
Sbjct: 112 DTDPYYQALDIKVKNYASAAGIEVFSPVSHTLFDSAEIIQKNGGRPPLSYQSFLKLAGQP 171
Query: 193 NVKEPIEISNVLSSHCKPI-DIQS-ENYSIPNLKEL---QIDEETLAPVKYHGGETEALK 357
+ ++ + S P+ D+ + E ++P +KEL +I ++ P K GGE+EALK
Sbjct: 172 SWASSPLLTTL--SWLPPVGDVGTCEISNVPTVKELGYEEIGQDESTPFK--GGESEALK 227
Query: 358 RLNLYMSKKEWVCKFEKPNSSPNS-IEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGRQ 531
RL + KEWV FEKP P++ ++P+TTVLSPY+ GCLS++ FY L +V +N +
Sbjct: 228 RLRESIRDKEWVANFEKPKGDPSAFLKPATTVLSPYLKFGCLSSRYFYQCLTDVYKNMKW 287
Query: 532 HTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYP 711
HT PPVSL+GQL+WR+F+YT G G +FD+M GN IC QIPW +D L AW E +TGYP
Sbjct: 288 HTSPPVSLVGQLLWRDFFYTVGFGTPNFDRMKGNRICKQIPWNDDDELLAAWREARTGYP 347
Query: 712 FVDAIMRQLKQEGWIHHL 765
++DAIM QL++ GW+HHL
Sbjct: 348 WIDAIMVQLRKWGWMHHL 365
>UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4;
Ostreococcus|Rep: Cryptochrome-like protein 1 -
Ostreococcus tauri
Length = 1646
Score = 149 bits (362), Expect(2) = 2e-51
Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Frame = +1
Query: 436 PSTTVLSPYISHGCLSAKLFYHKLKEV--ENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 609
PSTT LSPY+ GC+S ++FYH+L V E +H+ PP SLMGQLMWREFYY G
Sbjct: 1385 PSTTALSPYMKFGCVSPRVFYHELTAVYKELEGKHSKPPTSLMGQLMWREFYYLVAAGTK 1444
Query: 610 SFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 765
+FDKM GNAIC QIPW K+ AW +TG+P++DA M QL++EGW+HHL
Sbjct: 1445 NFDKMEGNAICRQIPWKKDRELFAAWENAQTGFPWIDAAMTQLRREGWLHHL 1496
Score = 76.6 bits (180), Expect(2) = 2e-51
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
DI+P +D + E+ GV + HT+YDV ++L + GA P TYQ F +V +
Sbjct: 1197 DIEPYAKIRDAAVRGALERAGVECHAASGHTLYDVDEMLEKCKGAPPTTYQGFFKIVDKM 1256
Query: 193 NVKE-PIEISNVLSSHCKPIDIQS--------ENYSIPNLKELQI----DEETLAPVKYH 333
PI+ + D ++ + Y IP L++L D+E V
Sbjct: 1257 GAPNAPIDAMEKMPGSFASSDEETKALVQGVADAYGIPTLEDLGYEPLGDDEGFPGV--- 1313
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 429
GGETE L+RL L +++KEW+ +FEKP+++P +
Sbjct: 1314 GGETEGLRRLRLMLARKEWIGQFEKPSTNPTT 1345
>UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 513
Score = 165 bits (401), Expect = 1e-39
Identities = 90/257 (35%), Positives = 142/257 (55%), Gaps = 6/257 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D +P Q+D + +A+ GV + +RV HT+YDV VL N+G +P+T+ + + +
Sbjct: 114 DSEPPAKQRDAVVTHLAKNLGVEVIQRVSHTLYDVETVLETNDGKLPMTFDEMAKTAEQL 173
Query: 193 NVKEPI--EISNVLSSHC-KPIDIQ-SENYSIPNLKELQIDE--ETLAPVKYHGGETEAL 354
P + + C P+ ++ Y +P L E + E E A + GGE EAL
Sbjct: 174 GPPCPPCQTVDKTVFGACLTPVGPDHADKYGVPLLSEFGMKELKEATAKKYWTGGEPEAL 233
Query: 355 KRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQH 534
+RL+ + KK FE+ + + + + LSPY+ GCLS +L+Y +L +
Sbjct: 234 RRLSAAL-KKCAENDFEERGWTIDEMFSNDAHLSPYMRFGCLSPRLYYQQLALTYMKEKK 292
Query: 535 TLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPF 714
++PP +L L+ RE + + A DKM+ N + +Q PW +N L+ W EGKTG+P+
Sbjct: 293 SIPPATLFTGLVRRELFLHVASHNADLDKMLDNPLSVQFPWEENKEGLERWKEGKTGFPW 352
Query: 715 VDAIMRQLKQEGWIHHL 765
+DAIMRQL++EGWIHHL
Sbjct: 353 IDAIMRQLREEGWIHHL 369
>UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 642
Score = 153 bits (371), Expect = 5e-36
Identities = 80/211 (37%), Positives = 128/211 (60%), Gaps = 5/211 (2%)
Frame = +1
Query: 34 QQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV-KEPI 210
++D I +A++ GV R HT+Y++ +++ NN + PLT+++F ++V + + + P+
Sbjct: 144 ERDGAIIKMAQQFGVETIVRNSHTLYNLDRIVEMNNNSPPLTFKRFQTIVSRLELPRRPL 203
Query: 211 -EISNVLSSHC-KPI-DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSK 381
++ C P+ D + YSIP+L+EL LAP + GGE+EAL+RL ++ K
Sbjct: 204 PSVTQQQMDKCGTPVADNHDQLYSIPSLEELGFRTGGLAPAVWRGGESEALERLRKHLEK 263
Query: 382 KEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE-VENGRQHTLPPVSLM 558
K WV E ++ S+ S LSPY+ GCLS ++FY+ L+E + PP+SL
Sbjct: 264 KVWVSHLEHSRANTCSLYASPAGLSPYLRFGCLSCRVFYYNLREHYIRLCKGCSPPLSLF 323
Query: 559 GQLMWREFYYTAGTGVASFDKMVGNAICIQI 651
GQL+WREF+YTA T +FD+M GN IC+Q+
Sbjct: 324 GQLLWREFFYTAATNNPNFDRMAGNPICVQV 354
>UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|Rep:
Cofactor: FAD - Aspergillus niger
Length = 567
Score = 144 bits (348), Expect = 3e-33
Identities = 90/267 (33%), Positives = 148/267 (55%), Gaps = 16/267 (5%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D D ++DE I +A + GV + + T++D +V+++N G ++ + ++ I
Sbjct: 108 DTDGYARERDETIRKLANEAGVEVIVKSGRTLFDSDEVVKQNKGEPTMSIHQVEKAIEQI 167
Query: 193 N-------VKEPIEISNVLSSHCKPIDIQSE-NYSIPNLKELQIDEETLAPVKYHGGETE 348
N V P I + L K DI + ++SIP L EL ID A +HGGE+
Sbjct: 168 NNGVPDRPVDAPERIPDPLGEE-KMRDISPKGDFSIPTLDELSIDPSQ-ATSPHHGGESI 225
Query: 349 ALKRLNLYMSKKE-WVCKFEKPNSSPNSIEP-STTVLSPYISHGCLSAKLFYHKLKEVEN 522
AL+ L Y+ + E ++ FEKP +SP + P +TT+LSP++ G LS + F+H +++
Sbjct: 226 ALEMLTTYLQQNEDYIATFEKPKTSPAAFHPQATTLLSPHLHFGSLSVRKFWHDVQDTLQ 285
Query: 523 GRQHTLPPVS-----LMGQLMWREFYYTAGTGVAS-FDKMVGNAICIQIPWTKNDAFLKA 684
R+ P S L GQL++RE ++ A + + + GN I ++ + + + +
Sbjct: 286 QRESAHKPTSDLPTNLPGQLLFREMFFAAQAALGPVYAQTRGNKI-VRF---QAEVWFRR 341
Query: 685 WAEGKTGYPFVDAIMRQLKQEGWIHHL 765
W EG+TG+P++DA+MRQLK EGWIHHL
Sbjct: 342 WKEGRTGFPWIDALMRQLKNEGWIHHL 368
>UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-PA
- Drosophila melanogaster (Fruit fly)
Length = 542
Score = 140 bits (340), Expect = 3e-32
Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 22/272 (8%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D +P + ++DE I + + + ++V HT++D V+ N G PLTYQ FL V+ I
Sbjct: 109 DCEPIWNERDESIRSLCRELNIDFVEKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQII 168
Query: 193 NVKEPIEISNVLSSHCKPIDIQSENY-SIPNLKELQIDEET---------LAPVKYHGGE 342
+ P ++ +++ E S+ ++L E LA + + GGE
Sbjct: 169 GLP-PRPTADARLEDATFVELDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGE 227
Query: 343 TEALKRLN--LYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY---HKL 507
T+AL L+ L + + + F PN + +I S +S ++ GCLS + FY H L
Sbjct: 228 TQALLLLDERLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDL 287
Query: 508 -KEVE-----NGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTK-N 666
K V+ G Q T + GQL+WRE++YT ++D+M GN IC+ IPW K N
Sbjct: 288 FKNVQLRACVRGVQMT-GGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPN 346
Query: 667 DAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ L++W G+TG+P +D MRQL EGW+HH
Sbjct: 347 ENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHH 378
>UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4;
Pezizomycotina|Rep: DNA photolyase, putative -
Aspergillus clavatus
Length = 613
Score = 110 bits (264), Expect = 4e-23
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 31/198 (15%)
Frame = +1
Query: 265 NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEP-S 441
++++P ++E+ ID +LA + GGET AL+ L Y+ E+V FEKP +SP + EP +
Sbjct: 224 DFAVPTMEEIGIDG-SLARSPHRGGETAALRVLAGYIQDGEYVGTFEKPKTSPAAFEPQA 282
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQ-----HTLPPVSLMGQLMWREFYYTAGTGV 606
TT+LSP++ G LS + F+ ++ V R+ + P +L GQL++R+ Y+ A +
Sbjct: 283 TTLLSPHLHFGSLSVRKFWWDVQGVLQQRRKQKKANASIPTNLPGQLLFRDMYFAAQAAI 342
Query: 607 A-SFDKMVGNAICIQIPW------------------------TKNDAFLKAWAEGKTGYP 711
+F + +GN I W ++ + + + W EG+TG+P
Sbjct: 343 GHAFGQTLGNKYVRFIDWHLPTNYITTEEGKYQPDGTYTVDSSEAENWFRRWKEGRTGFP 402
Query: 712 FVDAIMRQLKQEGWIHHL 765
++DA+MRQLK EGWIHHL
Sbjct: 403 WIDALMRQLKLEGWIHHL 420
>UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 684
Score = 109 bits (262), Expect = 7e-23
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 26/195 (13%)
Frame = +1
Query: 259 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP--NSI 432
SE +S P L L +D + GGE AL++L ++V F KP +SP ++
Sbjct: 245 SELFSAPTLASLGMDASKVKDT-IKGGEPIALEKLANICKDAKYVATFAKPKTSPGQSAE 303
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLKEVEN---GRQHTLPPVSLMGQLMWREFYYTAGTG 603
+PSTT+LSPY+ GCLS + + +E +N G T PP +L GQL++R+ Y A
Sbjct: 304 DPSTTLLSPYLKFGCLSVRKLWWDAEEAKNRYKGGSKTGPPENLNGQLLFRDMYACAEYA 363
Query: 604 VA-SFDKMVGNAICIQIPW--------------------TKNDAFLKAWAEGKTGYPFVD 720
+ +F ++ GN +C + W ++A L A+ G+TG+P++D
Sbjct: 364 IGDAFGRVRGNEVCRYMDWYLPTHYDENGEVVLPRPAGDAVSEARLSAYKLGQTGFPWID 423
Query: 721 AIMRQLKQEGWIHHL 765
A+MRQL+ EGW+HHL
Sbjct: 424 ALMRQLRLEGWMHHL 438
>UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 524
Score = 99 bits (238), Expect = 6e-20
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
++ E + ++ + + +K G+ ++ T++ + + VP TY +F K +
Sbjct: 116 EVTYEELNVEKALVEFCKKSGIHMHTIWGSTLFHKDDIPYKAK-TVPDTYTQFR---KGV 171
Query: 193 NVKEPIEISNVLSSHCKPID-IQSENYSIPNLKELQIDEETL-----APVKYHGGETEAL 354
+ + + + KP+ ++ E +IP+LK L D E + + GGE EAL
Sbjct: 172 ENQSTVRNLIDMPKNLKPLPPVKGELGTIPDLKSLLNDSEIKEVDQRSAFPFMGGEQEAL 231
Query: 355 KRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQH 534
RL Y+ + V K+++ + E +T LSP++++G LS ++ YH++K+ E R
Sbjct: 232 SRLGSYLWGTDSVAKYKETRNGLLG-ENYSTKLSPWLANGSLSPRMVYHRIKQYEEERVA 290
Query: 535 TLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPF 714
++ +L+WR+++ + +PW + K W EGKTG PF
Sbjct: 291 NHSTYWVLFELIWRDYFKFVCLKYGDRVFYRSGIMGKSLPWKHDKMTFKLWCEGKTGVPF 350
Query: 715 VDAIMRQLKQEGWI 756
VDA MR+LK+ GW+
Sbjct: 351 VDANMRELKETGWM 364
>UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=8; Bacillus cereus group|Rep:
Deoxyribodipyrimidine photolyase family protein -
Bacillus anthracis
Length = 476
Score = 85.8 bits (203), Expect = 1e-15
Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 5/253 (1%)
Frame = +1
Query: 19 DPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV 198
DP+ +Q ++ ++ + E KG+ + H + + + +++N + + + K +
Sbjct: 98 DPDRLQSNQKMKMMLEHKGMICKEFNSHLLLEPWVIKKKDNTEYKVFTPFYNAFQKQVIH 157
Query: 199 KEPIEISNVLSSHCKPIDIQ-SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYM 375
K ++ ++ + P+ + SE + +P + E P E A K +
Sbjct: 158 KPISKVQSIKGGNSLPVSLSVSELHLLPTIPWTSHMESIWEPT-----EEGAYKTWKEFF 212
Query: 376 SKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTL---PP 546
S K + + + PN + + ++L+PY+S G +S KL YH L Q +L
Sbjct: 213 SSK--LASYSEGRDFPN--QNAHSMLAPYLSFGQISVKLIYHYLINKSTESQCSLFEKQV 268
Query: 547 VSLMGQLMWREF-YYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDA 723
S + QL+WREF YY + K + + PW + L+ W +G TGYPF+DA
Sbjct: 269 NSFIRQLIWREFSYYLLYHYPFTAYKPLNKSF-EHFPWNNEEELLRVWQKGDTGYPFIDA 327
Query: 724 IMRQLKQEGWIHH 762
MR+L Q G++H+
Sbjct: 328 GMRELWQTGFMHN 340
>UniRef50_Q41CV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 451
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/142 (31%), Positives = 77/142 (54%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE A KRL ++ K + +E+ P +++ T+++S Y+ G + + + +++
Sbjct: 197 GEETARKRLRSFL--KNNLSAYEEQRDLP-AVD-GTSLMSRYLRTGEIGIRTIFDAVQQE 252
Query: 517 ENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEG 696
++ + + + +L+WREFYYT ++ N +I W ++ KAWAEG
Sbjct: 253 QDSKGKQ----TYLTELIWREFYYTILMHYPESKRLPVNEQYTKIEWETDEKGFKAWAEG 308
Query: 697 KTGYPFVDAIMRQLKQEGWIHH 762
KTGYP VDA MRQL GW+H+
Sbjct: 309 KTGYPIVDAAMRQLNTTGWMHN 330
>UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular
organisms|Rep: Cryptochrome DASH - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 520
Score = 81.0 bits (191), Expect = 3e-14
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Frame = +1
Query: 10 DDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS 189
+++ E +E +++I + V + T+Y + + G +P Y +F V++
Sbjct: 109 EEVASEEKSVEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEA 168
Query: 190 INVKEPIEISNVLSSHCKPIDIQSENY-SIPNLKELQIDEETLAPVKYHGGETEALKRLN 366
P+ +S P ++ + +L + + ++ + GGETEAL RL
Sbjct: 169 QGRVRPV-LSTPEQVKSPPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEALARLK 227
Query: 367 LYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPP 546
Y V +++ + ++ ST SP+++ GC+S + Y ++K+ E R
Sbjct: 228 HYFWDTNAVATYKETRNGMIGVDFSTK-FSPWLALGCISPRYIYEQIKKYEVERTANQST 286
Query: 547 VSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 726
++ +L+WR+++ + + +PW + AW EG+TG PFVDA
Sbjct: 287 YWVIFELLWRDYFKFVALKYGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDAN 346
Query: 727 MRQLKQEGWI 756
MR+L G++
Sbjct: 347 MRELALTGFM 356
>UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Petrotoga mobilis SJ95|Rep: Deoxyribodipyrimidine
photo-lyase - Petrotoga mobilis SJ95
Length = 462
Score = 79.8 bits (188), Expect = 7e-14
Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D P ++D I+ I E++ V + +++ +VL++N G + + FL K I
Sbjct: 115 DYTPFSKKRDNEIKAICERERVDFKEHFDVLLHEPTEVLKDN-GMPYIKFTDFLKKSKKI 173
Query: 193 NVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDE-ETLAPVKYHGGETEALKRLNL 369
+V+EP + N ++ +I S SI LQ+D+ + GG E L +
Sbjct: 174 DVREPQK--NKFKNYFTE-EISS---SIA----LQVDKFPQNENLILKGGRKEGLSYIER 223
Query: 370 YMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPV 549
+ K + + ++P SI+ TT LSP++ G +S + Y K+ E G +H
Sbjct: 224 IVKLKN----YSETRNTP-SID-GTTKLSPHLKFGTVSVREVYGKVNE-NFGNEH----- 271
Query: 550 SLMGQLMWREFYYTAGTGVASFDKMVGNAI---CIQIPWTKNDAFLKAWAEGKTGYPFVD 720
++ QL WR+F+ + F ++GN+ QI W + KAW G+TGYP VD
Sbjct: 272 EIITQLHWRDFFTHI---LYHFPHVLGNSFKEKYNQIQWENDVDKFKAWCTGRTGYPIVD 328
Query: 721 AIMRQLKQEGWIHH 762
A MRQL GW+H+
Sbjct: 329 AGMRQLNLTGWMHN 342
>UniRef50_Q8EBW1 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Shewanella|Rep: Deoxyribodipyrimidine photolyase -
Shewanella oneidensis
Length = 512
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Frame = +1
Query: 325 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHK 504
++ GE +A + LN ++ +K V +++ P +I+ T+V+SPY++ G LS +
Sbjct: 232 QWAAGEGQAKRLLNQFIQQK--VQDYKQDRDFP-AID-GTSVISPYLAIGVLSPRQCVAA 287
Query: 505 LKE--VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVG-NAICIQIPWTKNDAF 675
L + E T P + + +L+WREFY K N + W N +
Sbjct: 288 LLQRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSKGNNFNRQADHVLWRNNQSE 347
Query: 676 LKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
AW EGKTGYP VDA MRQL Q GW+H+
Sbjct: 348 FLAWCEGKTGYPIVDAAMRQLNQTGWMHN 376
>UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Prochlorococcus marinus|Rep: Deoxyribodipyrimidine
photolyase - Prochlorococcus marinus (strain NATL2A)
Length = 493
Score = 79.0 bits (186), Expect = 1e-13
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 190 INVKEPIEISNVLSSHCKPIDIQSENYSIPNLKEL-QIDEETLAPVKYHGGETEALKRLN 366
+N +E I N ++C I +++ SI L L + ++ L P K GE+E++K+LN
Sbjct: 185 LNERELSSIKNSDLNYC----ITNKSKSIYELLSLNRFNKTNLCPCK--PGESESIKQLN 238
Query: 367 LYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPP 546
++ + + K P S+E +T+ LS +S G +S ++ ++ + +N
Sbjct: 239 SFIHSGV-INSYNKARDIP-SLE-NTSHLSAALSLGTISCRVVWNGAQVSKNATDDEYKI 295
Query: 547 VSL---MGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFV 717
S+ + +L WREFY A +K + PW + +AW +G TG P +
Sbjct: 296 NSIDTWIKELAWREFYQNALINFPELEKGPYREKWLDFPWQNRPDWFEAWGDGLTGIPII 355
Query: 718 DAIMRQLKQEGWIHH 762
DA MRQLK GW+H+
Sbjct: 356 DAAMRQLKCSGWMHN 370
>UniRef50_Q84KJ5 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=8;
Magnoliophyta|Rep: Cryptochrome DASH,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 569
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/192 (22%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Frame = +1
Query: 184 KSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQID-EETLAPVKYHGGETEALKR 360
KS+ K I S + P + +P L++L ++ +E +++ GGE+ + R
Sbjct: 243 KSVEAKCSIRSSTRIPLSLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGR 302
Query: 361 LNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTL 540
+ Y KK+ + +++ + + ST SP+++ GC+S + Y +++ E R
Sbjct: 303 VFEYFWKKDLLKVYKETRNGMLGPDYSTK-FSPWLAFGCISPRFIYEEVQRYEKERVANN 361
Query: 541 PPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVD 720
++ +L+WR+++ + +G +Q W+++ ++W + KTGYP +D
Sbjct: 362 STYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLID 421
Query: 721 AIMRQLKQEGWI 756
A M++L G++
Sbjct: 422 ANMKELSTTGFM 433
>UniRef50_A3Y1I2 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrionales|Rep: Deoxyribodipyrimidine photolyase -
Vibrio sp. MED222
Length = 466
Score = 78.2 bits (184), Expect = 2e-13
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Frame = +1
Query: 103 TVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPN 282
T++D H++ E + VP ++ KF LV+ ++V + + L + + + S + S
Sbjct: 141 TLFDQHELSFELS-KVPSSFTKFRKLVEHLDVNRNETVISALPPAVR-LALTSTSTSTST 198
Query: 283 LKELQIDEETLAPVK-YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 459
+ + A + Y GGE L L Y S ++ +++ ++ + IE ST SP
Sbjct: 199 ISLFSSPNDESAVISDYWGGEDAGLAHLENYFSH-DYAFNYKQTRNAFDGIENSTK-FSP 256
Query: 460 YISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYY--TAGTGVASFDKMVGN 633
+++ GC+S K Y LK+ E + +L+WRE++Y G + F + +
Sbjct: 257 WLALGCVSPKTIYCHLKQFEADHGSNDSTYWIYFELLWREYFYWKCLSLGSSLFGETSNH 316
Query: 634 AICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ + L W G T YP VDA MRQL G++
Sbjct: 317 KLDSSNSSATLNLNLAKWKSGNTNYPIVDACMRQLNTTGYM 357
>UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family
protein; n=6; Flavobacteriales|Rep: Cryptochrome-like
DNA photolyase family protein - Gramella forsetii
(strain KT0803)
Length = 438
Score = 76.6 bits (180), Expect = 6e-13
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Frame = +1
Query: 25 EFVQQDEYIEDIAEK--KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL-SLVKSIN 195
E+ Q++ +E + + N Q ++ + + +P Y +F S K
Sbjct: 115 EWTQEEHDVEKEVRRLVNDIEFNSYYQQFLFHPEDIPFSSFNDIPKVYTEFRKSCEKYSK 174
Query: 196 VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDE---ETLAPVKYHGGETEALKRLN 366
V+E + + + L + P E IP+ K+L D+ + + + GGE +A KR+
Sbjct: 175 VRELVNLPSPLPARNLP-----EKAKIPSFKDLGHDDYEKDKRSAFPFKGGEDQAKKRIQ 229
Query: 367 LYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPP 546
Y + + + ++++ + S+ LS ++++G +SA+ YH++K+ E L
Sbjct: 230 EYFWESKNLTRYKETRNEMIGANYSSK-LSAWLANGSISARQVYHEVKKFEKEITSNLST 288
Query: 547 VSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 726
L+ +L+WR+F+ A+ +G + W + LK W G T Y FV+A
Sbjct: 289 YWLIFELIWRDFFKYISLKHANKIFKLGGIQNRSLEWNYDKQSLKDWIHGNTKYDFVNAN 348
Query: 727 MRQLKQEGWI 756
MR++ G++
Sbjct: 349 MREISNTGFM 358
>UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 483
Score = 75.4 bits (177), Expect = 1e-12
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Frame = +1
Query: 40 DEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV-KSINVKEPIEI 216
++ + D G F K T+Y + V + +P Y F V K V+ ++
Sbjct: 119 EDALRDTGATPGFFWGK----TLYHIDDVPFDGPDDIPKVYTNFRKAVEKKSTVRPTLDA 174
Query: 217 SNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK----YHGGETEALKRLNLYMSKK 384
+ L P+ SIP L EL D++ + + GGE+ R++ Y+ +
Sbjct: 175 PDSLL----PLPEDLNPGSIPTLDELGFDDDGTVDERGVLPFRGGESRGHDRIDEYIWRG 230
Query: 385 EWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQ 564
+++ K++ + S S +++HGC++ + + +++ E+ R + +
Sbjct: 231 DFLKKYKATRNGLLGANYSAK-FSAWLAHGCITPRQIHEEVERYEDQRVDNKSTYWMKFE 289
Query: 565 LMWREF--YYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQL 738
L+WR+F Y T G F G I W D + WA G TG PFVDA MR+L
Sbjct: 290 LIWRDFFSYVTWKAGERLFRP--GGINGNDIDWRYYDKSFERWAAGTTGIPFVDANMREL 347
Query: 739 KQEGWI 756
+ G++
Sbjct: 348 NRTGYM 353
>UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 478
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ G E AL L+ + K+ + +++ P S++ T+ LSPY++ G LS + +
Sbjct: 200 WQGSEQVALDALDEFC--KDRIKAYKRDRDIP-SLD-GTSTLSPYLAIGSLSVRQCWQMS 255
Query: 508 KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQ----IPWTKNDAF 675
++V + +L+WR+FY + F + Q +PW K+ A
Sbjct: 256 QQVSPSGSKPEGIATWQSELIWRDFYRHL---IYFFPHVCQYKAFKQETDHLPWKKDQAL 312
Query: 676 LKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+AW +G+TGYP VDA MRQL Q GW+H+
Sbjct: 313 FQAWCDGRTGYPLVDAAMRQLNQTGWMHN 341
>UniRef50_Q6FCZ9 Cluster: Deoxyribodipyrimidine photolyase
(Photoreactivation), FAD-binding; n=2;
Acinetobacter|Rep: Deoxyribodipyrimidine photolyase
(Photoreactivation), FAD-binding - Acinetobacter sp.
(strain ADP1)
Length = 477
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Frame = +1
Query: 250 DIQSENYSIPNLKEL---QIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 420
+I + +IP+LK+L QID+ ++ GET AL L + K + ++ +
Sbjct: 180 EIAKKEAAIPSLKQLGYSQIDQHIQN--EWPIGETFALNLLEDFTQDK--INRYHESRDY 235
Query: 421 PNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGR--QHTLPPVSLMGQLMWREFYYTA 594
P + T+ +S Y++ G LS + + + ++G+ + + +L+WREFY
Sbjct: 236 P--AQDGTSHISAYLTIGILSIRQCIQAIFQKQHGQFFLNNKGQEIWLNELLWREFYQQL 293
Query: 595 GTGVASFDK-MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ IPW +ND +AW +GKTG P VDA MRQLK GW+H+
Sbjct: 294 LFDFPKLSRHQPFQDHTKNIPWNENDEHFEAWIQGKTGIPIVDAGMRQLKATGWMHN 350
>UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Acyrthosiphon pisum)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Acyrthosiphon pisum (Acyrthosiphon pisumsymbiotic
bacterium)
Length = 483
Score = 74.5 bits (175), Expect = 3e-12
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Frame = +1
Query: 337 GETEALKRLNLYMSKK--EWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLK 510
GE EA+ RL + K ++ K + P +T++LSPY+S G +S++ L
Sbjct: 206 GEKEAINRLKNFCIYKFNDYFLKRDYP------FLDATSMLSPYLSAGIISSRYCLKVLL 259
Query: 511 EVENGRQ-HTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICI-QIPWTKNDAFLKA 684
+ +N + L Q++WREFYY G + +I W N A
Sbjct: 260 KTKNSLPLNVLLTSPWFDQILWREFYYHLLIGFPKISRSESLVTWEKEIHWINNIKHFNA 319
Query: 685 WAEGKTGYPFVDAIMRQLKQEGWIHH 762
W EG TG+P +DA MRQL + GW+H+
Sbjct: 320 WKEGNTGFPIIDAGMRQLNELGWMHN 345
>UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Aeromonas|Rep: Deoxyribodipyrimidine photolyase -
Aeromonas salmonicida (strain A449)
Length = 473
Score = 74.1 bits (174), Expect = 3e-12
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE EA +RL+ ++ V +E+ P + T++LSPY++ G +S + L++
Sbjct: 206 GEAEAQRRLHAFLEPA--VLDYEETRDFP--AQAGTSILSPYLAAGIISPRQCVGVLQQR 261
Query: 517 ENGRQHTL--PPVSLMGQLMWREFYYTAGTGVASFD-KMVGNAICIQIPWTKNDAFLKAW 687
R + P + +L+WREFY V + + +PW+ + AW
Sbjct: 262 LGHRPQSKAQPGFVWLNELVWREFYRHLLVLVPTLSMNLPFKPETATLPWSWDPVAFAAW 321
Query: 688 AEGKTGYPFVDAIMRQLKQEGWIHH 762
EG+TGYP VDA MR L GW+H+
Sbjct: 322 CEGRTGYPIVDAAMRCLHATGWMHN 346
>UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolyase;
n=3; Prochlorococcus marinus|Rep: Putative
deoxyribodipyrimidine photolyase - Prochlorococcus
marinus (strain MIT 9515)
Length = 503
Score = 72.9 bits (171), Expect = 8e-12
Identities = 47/142 (33%), Positives = 65/142 (45%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GG LKR+ + S K + + K SSP S + LSPYIS GC+S K HK
Sbjct: 190 GGREIGLKRMEYFFSNK--LSYYSKDISSPEKSFDSCSRLSPYISWGCISIKEIIHKANS 247
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAE 693
+ N L +L W + + + +I K+ LK W+E
Sbjct: 248 ITNPNSKMLK-----SRLTWHCHFIQKLESEPELEFKEFHPYFQKIR-KKDSHLLKLWSE 301
Query: 694 GKTGYPFVDAIMRQLKQEGWIH 759
GKTG+PF+DA MR L GW++
Sbjct: 302 GKTGFPFLDACMRSLNFHGWLN 323
>UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA
photolyase, N-terminal; n=4; Chloroflexi (class)|Rep:
DNA photolyase, FAD-binding:DNA photolyase, N-terminal -
Chloroflexus aurantiacus J-10-fl
Length = 534
Score = 72.5 bits (170), Expect = 1e-11
Identities = 60/250 (24%), Positives = 105/250 (42%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D P V++D I+ + G + ++++ +V + G Y + +S
Sbjct: 154 DYTPYAVRRDTAIKQALREAGYEAHSFKDTVIFEMKEVATAD-GRPYTVYTPYAKRWRSR 212
Query: 193 NVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLY 372
EP+ + ++ P+ + +P+L +L D P ++ GE AL+ L +
Sbjct: 213 LAAEPVTVQDMPRLATIPLPVSEP---LPHLTDLLPDAPATLP-RFPAGEAVALEALERF 268
Query: 373 MSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVS 552
+ + + + T+ LSPY+ G LS + G P S
Sbjct: 269 VRGP--LASYAQGRDL--MAVAGTSRLSPYLRLGVLSPRQCVAAALAAPPGPG----PES 320
Query: 553 LMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 732
+G+L+WR+FY + +I W + AW +G TGYP VDA MR
Sbjct: 321 WIGELIWRDFYVQVLYHFPHALRGSFKPAYNRIDWPNDPVLFAAWQQGLTGYPIVDAAMR 380
Query: 733 QLKQEGWIHH 762
QL++EGW+H+
Sbjct: 381 QLQREGWMHN 390
>UniRef50_A3D723 Cluster: Deoxyribodipyrimidine photo-lyase; n=8;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella baltica OS155
Length = 505
Score = 72.5 bits (170), Expect = 1e-11
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAK----LFYHK 504
GE +A + L+ ++ +K V +++ P +I+ T+ +SPY++ G +S + H
Sbjct: 226 GEGQAKRILSAFIQQK--VQDYKQDRDFP-AID-GTSSISPYLAIGVISPRQCVAALLHD 281
Query: 505 LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVG-NAICIQIPWTKNDAFLK 681
EV T P + + +L WREFY K N + W N
Sbjct: 282 FPEVIV--DDTSPARTWLNELTWREFYRHLLVAFPDLSKNHNFNRQADHVQWRNNPQEFA 339
Query: 682 AWAEGKTGYPFVDAIMRQLKQEGWIHH 762
AW EG+TGYP VDA MRQL Q GW+H+
Sbjct: 340 AWCEGRTGYPIVDAAMRQLNQTGWMHN 366
>UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Gluconobacter oxydans|Rep: Deoxyribodipyrimidine
photolyase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 479
Score = 71.7 bits (168), Expect = 2e-11
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Frame = +1
Query: 169 FLSLVKSINVKEPIEISNVLSSHCKPIDIQSE-NYSIPNLKELQIDEETLAPVKYHGGET 345
F +++ V EP+E + LS H P + S+ + +L D + GE
Sbjct: 156 FWKALQTHAVPEPLEAPSRLSFHAIPASVLSDARLNEDSLCPQAPDWAAGFRKTWEPGEA 215
Query: 346 EALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENG 525
E + L ++ K V + P E T+ LSPY++ G +S + + L++ +G
Sbjct: 216 EGQEHLEDFL--KNSVAGY--PRGRDRVAEEGTSRLSPYLASGAVSPRQVWAALQK--HG 269
Query: 526 RQHTLPPVSLMGQLMWREF--YYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGK 699
HT P + +L WREF Y F+ + + W ++ A LKAW G+
Sbjct: 270 A-HTDGPRIFLSELGWREFARYTLYHLPKLPFENLSPKFSGMH--WRRSAADLKAWQRGQ 326
Query: 700 TGYPFVDAIMRQLKQEGWIHH 762
TG P VDA MRQL Q GW+H+
Sbjct: 327 TGVPIVDAGMRQLWQTGWMHN 347
>UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacilli|Rep: Deoxyribodipyrimidine photolyase -
Enterococcus faecalis (Streptococcus faecalis)
Length = 477
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/145 (29%), Positives = 69/145 (47%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
Y GE A +RLN ++ +K + +E P + T+ LS ++ G LS + + +L
Sbjct: 196 YSVGEETARRRLNTFIDQK--LQSYENKRDFP--YQDQTSHLSTFLRTGELSIRTIWQEL 251
Query: 508 KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAW 687
V + +L + +L WR+FY + + I WT + W
Sbjct: 252 ASVPS----SLSKETFKKELAWRDFYNMIYSAFPQQKEEAIQEKFRYIQWTNDPEMFVKW 307
Query: 688 AEGKTGYPFVDAIMRQLKQEGWIHH 762
+G+TGYP +DA MRQL Q GW+H+
Sbjct: 308 QKGETGYPIIDAAMRQLNQTGWMHN 332
>UniRef50_Q39EN4 Cluster: Deoxyribodipyrimidine photolyase; n=42;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 518
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +1
Query: 436 PSTTVLSPYISHGCLSAKLFYHKLKEVEN--GRQHTLPPVSLMGQLMWREFYYTAGTGVA 609
P+T+ LSP++ G LS + +H ++ N G + +L WREF YT
Sbjct: 272 PATSRLSPFLRFGNLSPRQVWHAVQGAANAGGAAVAADADKFLSELGWREFSYTLLYHFP 331
Query: 610 SFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ A +PW + A L+AW G+TGYP VDA +R+L GW+H+
Sbjct: 332 ALASDNFRAQFDAMPWRDDPAALRAWQRGRTGYPLVDAGLRELWTTGWMHN 382
>UniRef50_A6VUF2 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinomonas sp. MWYL1|Rep: Deoxyribodipyrimidine
photo-lyase - Marinomonas sp. MWYL1
Length = 470
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 430 IEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 609
IEP+T+ LSPY++ G L + + N + + +L WR+FY +
Sbjct: 233 IEPATSTLSPYLALGALGPRQCLEAIFYTCNQEERRWQDSIWLKELAWRDFYRQLMSHFP 292
Query: 610 SFDKMVG-NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
K + W +N+ +AW EG+TG+P VDA MRQL Q GW+H+
Sbjct: 293 FLCKSRPFKPETSALIWRQNEEEFQAWCEGRTGFPIVDAAMRQLNQTGWMHN 344
>UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 564
Score = 70.9 bits (166), Expect = 3e-11
Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Frame = +1
Query: 103 TVYDVHKVLRENNGAVPLTYQKFLSLVKS-INVKEPIEISNVLSSHCKPIDIQSENYSIP 279
T+Y + L + ++P Y +F V+S ++ I +L P +I+ S+P
Sbjct: 226 TMYHIED-LPFSTSSLPDVYTQFRKSVESKCTIRICIRTPTLLGP---PPNIEDWG-SVP 280
Query: 280 NLKELQIDEETLAPVKYHGGETEALKR--LNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL 453
++ +L + EE A +++ GGE AL R L +Y + + + + +T
Sbjct: 281 SIDQLGLHEEK-AGMRFIGGEAAALSRDLLKVYKATRNGMLGADY-----------STKF 328
Query: 454 SPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGN 633
SP+++ G LS + Y ++K E RQ ++ +L+WR+++ + +G
Sbjct: 329 SPWLASGSLSPRFIYQEVKRYEKERQANDSTYWVLFELIWRDYFRFLSVKYRNSLFHLGG 388
Query: 634 AICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
++ W+++ +AW +G TGYP +DA M++L G++
Sbjct: 389 PRKVEARWSQDQTMFEAWRDGCTGYPLIDANMKELSATGFM 429
>UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 483
Score = 70.5 bits (165), Expect = 4e-11
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Frame = +1
Query: 271 SIPNLKELQIDE---ETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS 441
S+P L +L + +T A + + GGET L+R+ Y+ ++ + ++ + + S
Sbjct: 198 SLPKLTDLGLTHTTPDTRAVLHFKGGETAGLQRIEDYIWQRSLLQHYKDTRNGLLGADYS 257
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT--GVASF 615
T SP++++G +SA+ YH++K+ E L+ +L+WRE++ G F
Sbjct: 258 TK-FSPWLANGAISARTVYHEIKKYEQQVVKNKSTYHLVFELLWREYFRLVARKYGHRIF 316
Query: 616 DKMVGNAICIQIPWTKN-DAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
K G ++ + N K W G+TG PF+DA MR+L G++
Sbjct: 317 VK-GGIKAKGEVEMSSNRKRTFKRWKNGETGIPFIDANMRELNATGFM 363
>UniRef50_Q04449 Cluster: Deoxyribodipyrimidine photo-lyase; n=13;
Bacilli|Rep: Deoxyribodipyrimidine photo-lyase -
Bacillus pseudofirmus
Length = 339
Score = 70.5 bits (165), Expect = 4e-11
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAK-LFYHKLKE 513
GE A+KRL ++ K+ K N SI T+ LSPYI G +S++ ++YH L
Sbjct: 70 GEEHAIKRLQMFTKKR---LSGYKANRDFPSIT-GTSRLSPYIKTGAVSSRSIYYHIL-- 123
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASF-DKMVGNAICIQIPWTKNDAFLKAWA 690
N + + + +L WR+FY D+ + ++ W+ + L +W
Sbjct: 124 --NAEADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYR-ELNWSHDQDDLTSWK 180
Query: 691 EGKTGYPFVDAIMRQLKQEGWIHH 762
G+TG+P VDA MRQL EGW+H+
Sbjct: 181 RGETGFPIVDAGMRQLLNEGWMHN 204
>UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Pelagibacter ubique
Length = 473
Score = 70.1 bits (164), Expect = 6e-11
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T+ LSP++ G + + + K ++++ + + + +L WREF ++ + F +
Sbjct: 235 TSKLSPFLKFGQIHVETIWKKCQDIKVKK---IGYRKYINELGWREFSHSL---INYFPQ 288
Query: 622 MV-GNAI--CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
M+ GN PW KND FLKAW G TGYP VDA MR+L + GW+H+
Sbjct: 289 MLKGNLRKDFDNFPWVKNDKFLKAWKAGMTGYPIVDAGMRELYETGWMHN 338
>UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteroidetes|Rep: Deoxyribodipyrimidine photolyase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 434
Score = 70.1 bits (164), Expect = 6e-11
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Frame = +1
Query: 193 NVKEPIEI-SNVLSSHCKPIDIQSE---NYSIPNLKELQID---EETLAPVKYHGGETEA 351
N ++ +E S++ S KP I+S +P +K L + ++ A +K+ GGE+E
Sbjct: 155 NFRKKVEKESSIRSVFQKPAHIKSPAMPQLRLPTVKGLGLQPVIQDPRAVMKFTGGESEG 214
Query: 352 LKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQ 531
KRL Y+ + + + ++ + ST SP+++ GCLS + Y +LK+ E+
Sbjct: 215 CKRLTSYLFETQLISHYKNTRDGMIGSDYSTK-FSPWLALGCLSPREIYTELKKYESRFS 273
Query: 532 HTLPPVSLMGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGY 708
L+ +L+WR+++ + F G ++ A L W GKTG
Sbjct: 274 ANESTYWLIFELLWRDYFRFMMKKHKHQFFLYSGIKDSANASGLQDTAILSQWINGKTGN 333
Query: 709 PFVDAIMRQLKQEGWI 756
F+DA M +L G++
Sbjct: 334 DFIDANMLELTHTGFM 349
>UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rhodobacterales|Rep: Deoxyribodipyrimidine photo-lyase -
Maricaulis maris (strain MCS10)
Length = 499
Score = 70.1 bits (164), Expect = 6e-11
Identities = 43/142 (30%), Positives = 64/142 (45%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE AL RL +++ + + P S E T+ LSP+++ G +S + +H +++
Sbjct: 211 GEDGALNRLEAFLANE----LADYPQSRDRPDEDGTSRLSPHLAWGEISPRTIWHTVRDH 266
Query: 517 ENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEG 696
+ +L WR+F S N PW N A L AW G
Sbjct: 267 AERGGSFQGGEKFLSELGWRDFAIYLAHHFGSLRDENFNRQFDHFPWRSNPAGLDAWKRG 326
Query: 697 KTGYPFVDAIMRQLKQEGWIHH 762
+TG P VDA MRQL GW+H+
Sbjct: 327 QTGIPIVDAGMRQLWTTGWMHN 348
>UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Roseiflexus sp. RS-1|Rep: Deoxyribodipyrimidine
photo-lyase - Roseiflexus sp. RS-1
Length = 491
Score = 70.1 bits (164), Expect = 6e-11
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Frame = +1
Query: 241 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 420
+P+ + IP+ +L + P GGET RL ++ + +
Sbjct: 176 QPVPDGVADLPIPDNPDLDVSVIQRIPA---GGETTGAARLAAFLDPRATHGIAGYADGR 232
Query: 421 PNSIEPSTTVLSPYISHGCLSAKLFYHKL----------KEVENGRQHTLPPVSLMGQLM 570
EP+T+ LSPY+ GC++ + ++ E T + +G+L
Sbjct: 233 NLLAEPATSRLSPYLRFGCVAPRAALRAALNLLDRAGEEQDAECAATLTRSIETWIGELA 292
Query: 571 WREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 750
WR+FYY + + W + A AW EG+TGYP VDA MRQL +E
Sbjct: 293 WRDFYYQILWHHPHVLRSAFKPQYDALEWENDPALFDAWKEGRTGYPVVDAAMRQLNREA 352
Query: 751 WIHH 762
W+H+
Sbjct: 353 WMHN 356
>UniRef50_Q5IFN2 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=5; Eukaryota|Rep:
Cryptochrome DASH, chloroplast/mitochondrial precursor -
Ostreococcus tauri
Length = 546
Score = 70.1 bits (164), Expect = 6e-11
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Frame = +1
Query: 298 IDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGC 477
+DE ++ K GGE+ AL R+ Y+ + + + + + + + ST L+P+++ GC
Sbjct: 235 LDERSVLDFK--GGESNALARVKYYLWESDRLATYFETRNGMLGGDYSTK-LAPWLALGC 291
Query: 478 LSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY----YTAGTGVASFDKMVGNAICI 645
+S + +++ E+ R ++ +L+WR+F+ G + D G
Sbjct: 292 VSPRHVVSEIRRYESERVENKSTYWVIFELIWRDFFKFFALKHGNKIFHLDGTAGR---- 347
Query: 646 QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ W +++ LKAW G TGYP +DA MR+L G++
Sbjct: 348 RASWKRDEKILKAWKTGTTGYPLIDANMRELAATGFM 384
>UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10345,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 662
Score = 69.3 bits (162), Expect = 1e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 643 IQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+QIPW +N L WAEG+TG+P++DAIM QL+QEGWIHH
Sbjct: 451 LQIPWDQNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHH 490
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D +P ++D I +A++ GV R HT+Y++ +++ NN + PLT+++F ++V +
Sbjct: 137 DPEPYGKERDGAIIKMAQQFGVETIVRNSHTLYNLDRIVEMNNNSPPLTFKRFQTIVSRL 196
Query: 193 NV-KEPI-EISNVLSSHC-KPI-DIQSENYSIPNLKEL 294
+ + P+ ++ C P+ D + YSIP+L+EL
Sbjct: 197 ELPRRPLPSVTQQQMDKCGTPVADNHDQLYSIPSLEEL 234
>UniRef50_A3QCZ8 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Shewanella loihica (strain BAA-1088 /
PV-4)
Length = 478
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKL----KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 609
T+ LSPY++ G +S++ +L EV QH + + +L+WR+FY +
Sbjct: 243 TSGLSPYLAIGAISSRWLALQLVQRHPEVIYDTQHGA--FTWLNELIWRDFYKHL---LF 297
Query: 610 SFDKMV-GNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ +++ G + + +PW N+A +AW EG+TGYP VDA M+QL++ GW+H+
Sbjct: 298 HYPELIKGGSFQPKYESLPWPNNEAHFQAWCEGRTGYPIVDAAMKQLRRTGWMHN 352
>UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Reinekea sp. MED297|Rep: Putative
deoxyribodipyrimidine photolyase - Reinekea sp. MED297
Length = 465
Score = 68.5 bits (160), Expect = 2e-10
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Frame = +1
Query: 319 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 498
P++ E +AL RL+ + E V + P + T+ LS ++ GC S++
Sbjct: 198 PLQLPVTEDQALTRLDAFC---EEVRDYADRRDFP--ADNGTSQLSAALALGCTSSRQVA 252
Query: 499 HKLKEVENGRQH-TLPPVSLMGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKNDA 672
H L R H +L + +++WR+FY Y N PW KN+
Sbjct: 253 HTLH-----RHHISLASDTFFSEIIWRDFYKYLLFHTPRLCLGEPYNEKWDAFPWQKNET 307
Query: 673 FLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+L+ W EGKTG P VDA MRQL++ GW+H+
Sbjct: 308 WLERWREGKTGVPIVDAAMRQLRETGWMHN 337
>UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Trichodesmium erythraeum IMS101|Rep:
Deoxyribodipyrimidine photolyase - Trichodesmium
erythraeum (strain IMS101)
Length = 474
Score = 68.1 bits (159), Expect = 2e-10
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE- 513
GET AL++L + + + +++ + P S++ T+ LS + G + + + K +E
Sbjct: 208 GETAALEKLEKFSNGA--ISSYQEQRNFP-SLD-GTSQLSVALKFGTIGIRTVWAKTQEL 263
Query: 514 VENGRQHTLPP--VSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAW 687
+EN + + ++ WREFY + PW N A +AW
Sbjct: 264 IENCYSSEVFENIETWQKEIAWREFYQYVMYHYPELETGPYREHWKNFPWKNNKAHFQAW 323
Query: 688 AEGKTGYPFVDAIMRQLKQEGWIHH 762
EG TGYP VDA MRQL + GW+H+
Sbjct: 324 CEGNTGYPIVDAAMRQLNETGWMHN 348
>UniRef50_Q7UJB1 Cluster: Cryptochrome DASH; n=7; cellular
organisms|Rep: Cryptochrome DASH - Rhodopirellula
baltica
Length = 488
Score = 68.1 bits (159), Expect = 2e-10
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Frame = +1
Query: 196 VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYM 375
++EPI I L DI + S+ L +D+ L ++ GG+ A +R+ Y+
Sbjct: 169 LEEPIRIHGTLPEEVNAGDIPTLE-SL-GLSTPPLDDRCLN--QFTGGQNAAQQRMEEYI 224
Query: 376 SKKEWVCKFEKPNSSPNSIEPS-TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVS 552
++ + +++ + + P+ ++ SP+++ GCLS ++ ++ E R
Sbjct: 225 WNEDRLRVYKETRNG--MLHPNDSSKFSPWLAQGCLSPRMIADHVRRYEEERVKNKSTYW 282
Query: 553 LMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 732
++ +L+WR+++ + G + + W + + W +G TGYP VDA MR
Sbjct: 283 MIFELLWRDYFRWISRKHGATLFRAGGLRGVNVDWKSDRELFRRWQDGTTGYPLVDANMR 342
Query: 733 QLKQEGWI 756
+L+ G++
Sbjct: 343 ELRTTGYM 350
>UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 614
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 26/103 (25%)
Frame = +1
Query: 535 TLPPVSLMGQLMWREFYYTAGTGVAS-FDKMVGNAICIQIPW------------------ 657
+LPP SL GQL++R+ Y+ A + F + GNA C IPW
Sbjct: 271 SLPPESLTGQLLFRDMYFAAQAAIGPCFSQTAGNAHCRFIPWHLPSHVEDNAVSGQVLRK 330
Query: 658 -------TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 765
+ +++ + W G+TG+P++DA+MRQL+ EGWIHHL
Sbjct: 331 FEYEVDSEQAESWFRRWEAGQTGFPWIDALMRQLRVEGWIHHL 373
>UniRef50_Q9KNA8 Cluster: Deoxyribodipyrimidine photo-lyase; n=25;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Vibrio cholerae
Length = 469
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T+ LSPY++ G LSA+ +L + + + + +L+WREFY + K
Sbjct: 236 TSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSK 295
Query: 622 MVGNAIC-IQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++ W ++ + W EGKTGYP VDA MRQL Q GW+H+
Sbjct: 296 SRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHN 343
>UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15;
Cyanobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Synechocystis sp. (strain PCC 6803)
Length = 488
Score = 66.5 bits (155), Expect = 7e-10
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 6/256 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT---YQKFLSLV 183
D +P ++D + ++G+ I ++ +VL + + ++ + L
Sbjct: 115 DTEPYAQKRDLAVAQALRERGLAIATEWDQLMHHPGEVLTQAGSPYTVYTPFWKNWSQLP 174
Query: 184 KSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRL 363
K+ V P ++ + + + + E +IP L +L + P+ GE A +RL
Sbjct: 175 KTSPVPTPKDLQGLTPAEKEKL-APLEPLAIPQLADLGFIWDQ--PLPLTPGEEAAEQRL 231
Query: 364 NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGR-QHT 537
+ +++ + ++++ + P +++ T+ LS + G +S + + E E R +
Sbjct: 232 DWFVA--HGLEEYQQNRNFP-ALD-GTSQLSAALKFGVISPRTLWQTTLEAWEQSRSEEA 287
Query: 538 LPPVSLMGQ-LMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPF 714
+ Q L WREFY + + + + PW +N +AW EG+TGYP
Sbjct: 288 RASIETWQQELAWREFYQHCLYSFPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPI 347
Query: 715 VDAIMRQLKQEGWIHH 762
+DA M QL Q GW+H+
Sbjct: 348 IDAAMAQLNQTGWMHN 363
>UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 441
Score = 66.1 bits (154), Expect = 9e-10
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 280 NLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 459
N E +E P + GGE L RL +++ + +++ ++ + S++ SP
Sbjct: 185 NRGECPAIQEPTQPQAFRGGEQAGLARLQDFLAGTHAIDTYKETRNALDDWN-SSSKFSP 243
Query: 460 YISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYY----TAGTGVASFDKMV 627
+++HGCLSA+ + E L +++WRE++Y G+ + D +
Sbjct: 244 WLAHGCLSAREVADSISLYEQQHTSNESTYWLWFEVLWREYFYWYALRHGSELFRRDGVQ 303
Query: 628 GNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
G + + KAW EG T YP V+A M QL++ G+I
Sbjct: 304 GKRQSVTFYGHR----FKAWCEGNTSYPLVNAAMNQLRETGYI 342
>UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Alphaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase family protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 485
Score = 65.7 bits (153), Expect = 1e-09
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE A KRL+ ++ V + + P + T+ LSP++ G + + ++
Sbjct: 207 GEVGAQKRLDAFLDGP--VSDYVGTRNLPG-VSTGTSRLSPHLRFGEIGPAQIWRAVRAR 263
Query: 517 ENGRQHTLPPVSL-MGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAE 693
+Q + + ++ WREF YT + N+ Q+ W K+D+ AW+
Sbjct: 264 LEAQQADEDSARVFLSEIAWREFSYTLLYYNPALATENYNSNFNQMAWRKDDSGFAAWSR 323
Query: 694 GKTGYPFVDAIMRQLKQEGWIHH 762
G+TGYP VDA MR+L GW+H+
Sbjct: 324 GQTGYPIVDAGMRELWHTGWMHN 346
>UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain CC9311)
Length = 492
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Frame = +1
Query: 436 PSTTVLSPYISHGCLSAKLFY---HKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV 606
P T+ LS +S G +S + + +KE+ + +L WREFY A +
Sbjct: 257 PGTSYLSAGLSVGTVSPRQAWCAAQGVKEIARSDEQQQAITVWEQELCWREFYQQA---L 313
Query: 607 ASFDKMVGNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
F ++ Q PW N + +AW EG+TG P +DA MRQL Q GW+H+
Sbjct: 314 FHFPELADGPYREQWRRFPWENNSDWFEAWREGQTGMPIIDAAMRQLNQSGWMHN 368
>UniRef50_Q6BZK7 Cluster: Similar to tr|O93963 Trichoderma harzianum
DNA photolyase; n=2; Saccharomycetaceae|Rep: Similar to
tr|O93963 Trichoderma harzianum DNA photolyase -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 555
Score = 64.9 bits (151), Expect = 2e-09
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Frame = +1
Query: 259 SENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI-E 435
SE +P K L D++ + GE EA L++++ KF+K + S N I E
Sbjct: 258 SEIPQVPESKRLTHDQQKEFDTCWKCGEHEAWLALSVFLESD----KFKKYDESRNEISE 313
Query: 436 PSTTVLSPYISHGCLSAK-----LFYHK-LKEVENGRQHTLPPVSLMGQLMWREFYYTAG 597
S + +S IS G +S + + +K +K++++G Q T + Q+ WR+FY
Sbjct: 314 ESVSRMSCPISSGIISTRSIIRYILENKFVKKIDSGEQGT----GWIRQIAWRDFYRHIL 369
Query: 598 TG---VASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
V F + + W N W +GKTG+P VDA MRQL Q G++H+
Sbjct: 370 CNWPYVCMFKPFLLEYD--DLNWEYNSDHFYKWCQGKTGFPIVDAAMRQLNQTGYLHN 425
>UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photo-lyase
- Halobacterium salinarium (Halobacterium halobium)
Length = 481
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Frame = +1
Query: 274 IPNLKELQIDE-ETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTV 450
+P+++EL E E P G A L+ + + + ++E P+ EP T+
Sbjct: 189 LPSVQELGFAEPEAAVP---DAGTAAARSLLDAFRESGD-IYRYEDRRDYPHE-EP-TSR 242
Query: 451 LSPYISHGCLSAKLFYHKLKEVENGRQ---HTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
LSP++ G + + Y + ++ + +GQL WREFY +
Sbjct: 243 LSPHLKFGTIGIRTVYEAARAAKSDADTDDERENVAAFIGQLAWREFYAQVLYFNQNVVS 302
Query: 622 MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
A I W + A L+AW +G+TGYP VDA MRQL+ E ++H+
Sbjct: 303 ENFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHN 349
>UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 479
Score = 64.1 bits (149), Expect = 4e-09
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +1
Query: 400 FEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMG---QLM 570
FE + E T++LSP++ G + + + EVE + SL +L
Sbjct: 218 FEYGRARDFPAEQGTSLLSPHLCWGTIGIRRVWQATCEVEAEARSEEAESSLKTWRQELC 277
Query: 571 WREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 750
WREFY + + W + +AW G+TGYP VDA MRQL + G
Sbjct: 278 WREFYKHVLVHWPHVESGAYRRAFDALEWDNRQDWFQAWCAGQTGYPIVDAAMRQLNETG 337
Query: 751 WIHH 762
W+H+
Sbjct: 338 WMHN 341
>UniRef50_A6DFN1 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Lentisphaera araneosa HTCC2155
Length = 481
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Frame = +1
Query: 415 SSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 594
S P+ S LSPY++ G +S++ Y +K + + L+ +L WR +
Sbjct: 217 SKPSESRKSCGRLSPYLAWGNVSSRQVYQLVKASPKYKDNKRAYSGLLTRLKWRSHFIQK 276
Query: 595 GTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
S++ + N + N F++AW +GKTGYP VDA MR L GWI+
Sbjct: 277 FEVECSYEYLCLNKGYELMSLDFNAEFIEAWKDGKTGYPLVDACMRCLHATGWIN 331
>UniRef50_A4CAK2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas tunicata D2|Rep: Deoxyribodipyrimidine
photolyase - Pseudoalteromonas tunicata D2
Length = 437
Score = 64.1 bits (149), Expect = 4e-09
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Frame = +1
Query: 244 PIDIQSENYSIPNLKELQIDEETLAPVK----YHGGETEALKRLNLYMSKKEWVCKFEKP 411
P +++ Y P L + + L P Y+GGE A L+ Y S K E
Sbjct: 165 PAPLEALTYLPPPLLSTEHKKHDLKPSAFNRYYNGGEITAHAYLHHYFSSKAPSIYKETR 224
Query: 412 NSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYT 591
N+ + +T LS +++HG LS + LK E+ + + +L+WRE++Y
Sbjct: 225 NALMG--DDFSTKLSGFLAHGALSPRQIMAALKRYESTQGANESTYWIYFELLWREYFYW 282
Query: 592 AGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
G + + + K W EG T YP V+A+MR+L + GW+
Sbjct: 283 YARKHQQRLFSAGGVRQKSLATSFYPSRFKQWCEGSTPYPLVNALMRELNETGWM 337
>UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Salmonella typhimurium
Length = 473
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T+ LS ++ G LS + H+L + P + +L+WREFY T + K
Sbjct: 236 TSRLSASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCK 295
Query: 622 MVGNAICIQ-IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ + W +N + +AW +G+TGYP VDA MRQL GW+H+
Sbjct: 296 HQPFIRWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHN 343
>UniRef50_Q89AJ9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 478
Score = 63.7 bits (148), Expect = 5e-09
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Frame = +1
Query: 400 FEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWR 576
F K N E ST++LS ++S G +S + L + H L + +L+WR
Sbjct: 224 FNKYNFDQEIFELNSTSMLSAHLSIGVISPRQCVTLLFKEYPDIIHKLEECKWINELLWR 283
Query: 577 EFYYTAGTGVASFDKMVGNAICI-----QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 741
EFY + F +G + +I W N +L W +G TGYP +DA MRQLK
Sbjct: 284 EFYQH----LLYFYPNIGQNQSLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLK 339
Query: 742 QEGWI 756
Q GWI
Sbjct: 340 QLGWI 344
>UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=13; Bacteroidetes|Rep: Deoxyribodipyrimidine
photolyase-class I - Psychroflexus torquis ATCC 700755
Length = 457
Score = 63.3 bits (147), Expect = 6e-09
Identities = 40/131 (30%), Positives = 61/131 (46%)
Frame = +1
Query: 370 YMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPV 549
Y K+ + +E + P SIE T+ LSPY+ G + + V+N
Sbjct: 227 YNITKDLLEHYEDTRNIP-SIE-GTSRLSPYLRFGLIGYRKLIQAALSVKNE-------- 276
Query: 550 SLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIM 729
+ + +L+WREFY +I W ++ + W +GKTGYP VDA M
Sbjct: 277 TFLNELIWREFYKAILYNHPKTQNSAFKPKYDRIEWRNDENEFEKWKKGKTGYPIVDAGM 336
Query: 730 RQLKQEGWIHH 762
RQL + GW+H+
Sbjct: 337 RQLNETGWMHN 347
>UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Alteromonadales bacterium TW-7|Rep:
Deoxyribodipyrimidine photolyase - Alteromonadales
bacterium TW-7
Length = 436
Score = 63.3 bits (147), Expect = 6e-09
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Frame = +1
Query: 94 VQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC-KPIDIQSENY 270
+Q T+Y ++ L N +P ++ F V++ N+ PI +S++ + KPI + ++N
Sbjct: 131 LQDTLYQQNE-LPFNLTDLPKSFTPFKKKVEAANI--PITLSHITTELLPKPITLCAKN- 186
Query: 271 SIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTV 450
I+ HGG T A K Y + E ++ ++ + + +TT
Sbjct: 187 --------PIELPKAINNSMHGGLTSAQKHCEQYFAG-ELPSTYKITRNALDGFD-NTTK 236
Query: 451 LSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV-ASFDKMV 627
SP+++ GC+SAK Y+ +++ E + +L+WRE++ V +S
Sbjct: 237 FSPWLAFGCISAKQIYNAVEQYEQTYTANDSTYWIKFELLWREYFKWHALNVQSSLFSFK 296
Query: 628 GNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
G + + F AW +G T YP V+AIM++L G+I
Sbjct: 297 GQKQTKPLTTFMPNRFA-AWCQGTTPYPLVNAIMKELNATGFI 338
>UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1;
Aphrocallistes vastus|Rep: Photolyase related protein -
Aphrocallistes vastus
Length = 563
Score = 63.3 bits (147), Expect = 6e-09
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = +1
Query: 274 IPNLKELQIDEETLAPVKY--HGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTT 447
IP L L +EE +A + + GGE LN Y +E + + + I
Sbjct: 241 IPKLNALFTEEE-IAKLNFIFQGGERRTEDYLNEY---REARLRDVSGDEDASPIAAKAM 296
Query: 448 VLSPYISHGCLSAK-LFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKM 624
+SP++ GC++ + LF +K +++ + ++ +M R+F +++
Sbjct: 297 GISPHLRFGCITPRHLFNFLVKTIKDANYSRIKINKVLAGIMARDFALQVSQLQTIPERI 356
Query: 625 VG-NAICIQIPWTKND-AFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ N IC+ IPW KN+ ++ + +TG+PF DA + QLK EG++
Sbjct: 357 ISLNKICLPIPWDKNNNEIVEKLTDAQTGFPFFDAAITQLKTEGYV 402
>UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain
protein; n=1; Psychromonas ingrahamii 37|Rep: DNA
photolyase, FAD-binding-domain protein - Psychromonas
ingrahamii (strain 37)
Length = 448
Score = 62.9 bits (146), Expect = 8e-09
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Frame = +1
Query: 148 VPLTYQKFLSLVKSINVKEPIEISNVLSS--HCKPIDIQSENYSIPNLKELQIDEETLAP 321
+P++Y KF + + + EP+ L S P + + +P + ++ +
Sbjct: 146 LPISYSKFRKKMAEVIIPEPVSTVQSLPSMFDTLPAPTRFKPEWLPTVSAIKAKQG---- 201
Query: 322 VKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYH 501
++ GGE + LK L Y S ++++ ++ + + S+ LSP+++ GC+S + +
Sbjct: 202 FEFEGGEQQGLKHLRQYFSSNS-PAEYKQVRNNLDGWKNSSK-LSPWLNSGCISVRQVMN 259
Query: 502 KLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV-ASFDKMVGNAICIQIPWTKNDAFL 678
L E E L +L+WRE+Y V A + G A + + F
Sbjct: 260 NLAEFEQQHGKNSSTECLYLELLWREYYQWVHYKVGAKTYQFKGLAKHRPLTTFYPERFN 319
Query: 679 KAWAEGKTGYPFVDAIMRQLKQEGWI 756
K W G T Y V+A M +L+Q G++
Sbjct: 320 K-WCLGNTPYSLVNAFMHELRQTGYL 344
>UniRef50_Q9HVD2 Cluster: Deoxyribodipyrimidine photolyase; n=22;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Pseudomonas aeruginosa
Length = 481
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 436 PSTTVLSPYISHG------CLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAG 597
P T+ LSPY++ G CL A L ++ E G+Q + + +L+WREFY
Sbjct: 239 PGTSQLSPYLAAGVLSPRQCLDAALVANR-GEFSGGQQGA---ATWINELLWREFYKHIL 294
Query: 598 TGVASFDK-MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
G + + W + A L+AW +G+TG P +DA MRQL GW+H+
Sbjct: 295 VGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHN 350
>UniRef50_A7HMU7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Deoxyribodipyrimidine photo-lyase - Fervidobacterium
nodosum Rt17-B1
Length = 436
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/104 (33%), Positives = 53/104 (50%)
Frame = +1
Query: 451 LSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVG 630
LSPYI G LS ++++ N P + QL WREF+Y + F+K+
Sbjct: 221 LSPYIRFGVLS-------IRKIHNIASKVSP--EFVRQLAWREFWYHIKYNFSEFNKLEF 271
Query: 631 NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W ++ + + +TGYP VDA +RQLKQE W+H+
Sbjct: 272 LEKRRNVRWRYDEKLFEKFVNAQTGYPIVDAGIRQLKQENWMHN 315
>UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 595
Score = 62.5 bits (145), Expect = 1e-08
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 14/215 (6%)
Frame = +1
Query: 160 YQKFLSLVKSINVKEP----IEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK 327
Y+K++S +++ N K+ IE S SS+ + ++ + Y +P+ ++ E+TL K
Sbjct: 277 YKKWVSFLEA-NQKDKHTICIEASIPQSSNREKVNPEEIKYQLPDKFMSEMPEQTLNIPK 335
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYHK 504
E ALK+L ++SK+ K N+ + ++ T++LS Y++ G +SA+ ++
Sbjct: 336 --ADEETALKKLTEFISKRA-----SKYNNDKDLLDLTGTSLLSCYVTSGVISARTILNQ 388
Query: 505 LKEVENGR------QHTLPPVSLMGQLMWREFYYTAGT--GVASFDKMVGNAICIQIPWT 660
+ N R + + + ++ WR+FY A + S D + + I W
Sbjct: 389 SYQANNSRLMNKDIKKNNSLETFIKEVAWRDFYKHAISYWPFLSMD-LPFKFETLNIKW- 446
Query: 661 KNDAFL-KAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ND FL + W G+TG P VDAIM ++ + G+I++
Sbjct: 447 ENDVFLFEKWCYGETGIPIVDAIMLKMLKTGYINN 481
>UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 655
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Frame = +1
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPP--VSLMG-QLMWREFYYTAGTG 603
E T+ +SPY++ G +SA+ + K++ G+ H V++ ++ +R+FY
Sbjct: 412 ENGTSRISPYLAAGVVSARECLRRTKQLTKGKLHVGRDSGVAMWNTEISFRDFYAHV--- 468
Query: 604 VASFDKM-VGNAICIQ---IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+A++ K+ +G+A + + W + + L AW +G+TGYP VDA RQ Q+G+IH+
Sbjct: 469 LAAWPKVCMGHAFITKYEDVVWETDSSTLDAWKQGRTGYPIVDAAQRQCIQQGYIHN 525
>UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas
mobilis|Rep: DNA photolyase - Zymomonas mobilis
Length = 469
Score = 62.1 bits (144), Expect = 1e-08
Identities = 40/140 (28%), Positives = 71/140 (50%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE EA K+L ++ + + K P + T++LS ++ G +S+K +H++ +
Sbjct: 210 GENEAHKQLKSFIEND--LAHYAKERDFP--AKDGTSLLSAFLRSGQISSKQIWHEVTKN 265
Query: 517 ENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEG 696
+G + + +L WREF ++ ++ ++PW K L+ W EG
Sbjct: 266 GSGEGTS----KFLEELGWREFAWSVLWEHPDLNQHNLRPEFDKMPWKKASDNLQRWKEG 321
Query: 697 KTGYPFVDAIMRQLKQEGWI 756
+TGYPF+DA MR L Q G++
Sbjct: 322 QTGYPFIDAGMRALWQTGFM 341
>UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Prosthecochloris aestuarii DSM 271
Length = 477
Score = 62.1 bits (144), Expect = 1e-08
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 1/249 (0%)
Frame = +1
Query: 19 DPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL-SLVKSIN 195
+P +++D+ I+ + +G+ ++ +++ H+VL++NN + F + ++
Sbjct: 100 EPWRMKRDQGIKATLQAEGIEVSSFNGSLLWEPHEVLKQNNTPYRVFTPFFRRGCLNALP 159
Query: 196 VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYM 375
+ P+ + ID + L + D + ++ + GE A + L ++
Sbjct: 160 PRTPLPAPQRMLM-ADTIDNSISVQDLNLLPSIPWDSQLIS--HWSVGENSARQSLLRFL 216
Query: 376 SKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSL 555
+ + +++ P S LSP + G LS +++ K +G+
Sbjct: 217 D--QGLNGYKEGRDFPGQNHVSR--LSPALHFGELSPNTVWYEAKRCGSGQDLD----HF 268
Query: 556 MGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQ 735
+ +L WREF YT + + PW ND L W +G TGYP VDA MR+
Sbjct: 269 LSELGWREFAYTLLYHNHDMPEKNLQSAFDAFPWVHNDETLIRWQQGMTGYPLVDAGMRE 328
Query: 736 LKQEGWIHH 762
L Q G++H+
Sbjct: 329 LWQTGYMHN 337
>UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;
n=1; Flavobacterium psychrophilum JIP02/86|Rep:
Deoxyribodipyrimidine photolyase PhrB2 - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 502
Score = 62.1 bits (144), Expect = 1e-08
Identities = 40/142 (28%), Positives = 68/142 (47%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GGE A + L+ ++ KK +V + K S P + LSPY+++G +S + Y +
Sbjct: 197 GGENFAWRYLDSFV-KKRYV-NYSKHISKPLLSRKGCSRLSPYLTYGNISMRAIYQYTNQ 254
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAE 693
++ ++ + +L W + + + N + KN+ ++KAW E
Sbjct: 255 HYETSKNKRAILNFVSRLHWHCHFMQKFEDECTMEFENANRAYDVLIKPKNETYIKAWQE 314
Query: 694 GKTGYPFVDAIMRQLKQEGWIH 759
GKTG P VDA MR L G+I+
Sbjct: 315 GKTGVPIVDACMRCLVTTGYIN 336
>UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Alphaproteobacteria|Rep: Deoxyribodipyrimidine
photolyase - Roseobacter sp. MED193
Length = 502
Score = 62.1 bits (144), Expect = 1e-08
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Frame = +1
Query: 244 PIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSP 423
P+DI SIP ++L + + ++P + GG L+RL +++++ +++ SSP
Sbjct: 159 PVDIVPG--SIPTARDLGLGSD-VSPGRQSGGRGAGLERLESFLNQRGE--HYQRAMSSP 213
Query: 424 NSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPV---------SLMGQLMWR 576
+ + LSPY++ G +S + ++ + RQ L P S G+L W
Sbjct: 214 LEGTSACSRLSPYLAWGAVSMR----EVAQANAARQRALLPAEKSWRKSLRSFSGRLHWH 269
Query: 577 EFYYTAGTGVASFDKMVGNAICIQI-PWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGW 753
+ + + + + P T + A L+AW +G+TGYPF+DA MR L+ GW
Sbjct: 270 CHFIQKIEDEPRIEFENLHRLMDDLRPKTPDAARLQAWEKGETGYPFLDACMRCLRSTGW 329
Query: 754 IH 759
++
Sbjct: 330 LN 331
>UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Arthrobacter sp. (strain FB24)
Length = 474
Score = 62.1 bits (144), Expect = 1e-08
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T+ LSP++ G +S +H L+E RQ +L WREF +
Sbjct: 242 TSRLSPHLRFGEISPFRIWHALRE-RFPRQAPADVGIFRSELGWREFCWQLLYENPELAS 300
Query: 622 MVGNAICIQIPW-TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W T +DA L+AW +G+TGYP VDA MRQL Q GW+H+
Sbjct: 301 RNYRPDFDRFEWQTPSDAELEAWQQGRTGYPLVDAGMRQLWQTGWMHN 348
>UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Deoxyribodipyrimidine photolyase - Methanococcoides
burtonii (strain DSM 6242)
Length = 467
Score = 62.1 bits (144), Expect = 1e-08
Identities = 45/144 (31%), Positives = 68/144 (47%)
Frame = +1
Query: 331 HGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLK 510
HGG L L S ++V ++ P S++ TT LS + G +S + FY+ +
Sbjct: 207 HGGRANGLSVLQ---SLSQFV-NYDTERDLP-SVK-GTTGLSAHNKLGTISIREFYYSVI 260
Query: 511 EVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWA 690
+ E GR HTL + +L WR+F+ K + W + F AW
Sbjct: 261 D-ELGRGHTL-----INELYWRDFFTQISFEFPDVFKHAFKKKFDHLSWDNDRIFFDAWC 314
Query: 691 EGKTGYPFVDAIMRQLKQEGWIHH 762
GKTG+P VDA MR+L G++H+
Sbjct: 315 LGKTGFPIVDAGMRELNTTGYMHN 338
>UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4;
Gammaproteobacteria|Rep: Cryptochrome DASH - Idiomarina
loihiensis
Length = 449
Score = 61.7 bits (143), Expect = 2e-08
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Frame = +1
Query: 148 VPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK 327
+P T+ +F V+ ++ ++ N L S K N S P K ++E LA
Sbjct: 160 LPETFSQFRKKVEPLSRNFSVQPVNALPSLPK-------NISYPGFKAETLNE--LASDD 210
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ GGE AL L Y S E +++ ++ + S+T SP+++ GCLS + L
Sbjct: 211 FEGGERAALTHLTSYFSG-ESAGTYKQTRNALDDFS-SSTKFSPWLAQGCLSVRQIMAAL 268
Query: 508 K--EVENGRQHTLPPVSLMGQLMWREFYY----TAGTGVASFDKMVGNAICIQIPWTK-- 663
+ E E G + +S +L+WRE+++ G + +F + G + P T
Sbjct: 269 RAYETEFGENESSYWISF--ELLWREYFFWYALKHGKRLFAFSGLSGKS-----PKTSFY 321
Query: 664 NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
++ F K W G T YP V+A M+QL G++
Sbjct: 322 SERFQK-WCSGNTPYPIVNACMKQLNATGYM 351
>UniRef50_Q1VN24 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Psychroflexus torquis ATCC 700755|Rep:
Deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 380
Score = 61.3 bits (142), Expect = 3e-08
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL-K 510
GG EA L+ ++ K + SSP+ E S + LSP+I+ GC+S + Y KL K
Sbjct: 191 GGSDEAYSLLDTFL--KHRCAGYSFKMSSPHEAEHSCSRLSPHIAFGCISIREIYQKLLK 248
Query: 511 EVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWA 690
E+E + S +L W + + + + ++ N+ ++ W
Sbjct: 249 ELEI-TSYKKDLNSFKKRLYWHCHFIQKLETEPELEFKSMHPMADELRQDINNELIEKWI 307
Query: 691 EGKTGYPFVDAIMRQLKQEGWIH 759
G+TG+PF+DA ++ L++ GWI+
Sbjct: 308 MGETGFPFLDACIQYLRKGGWIN 330
>UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorhodospira halophila SL1|Rep: Deoxyribodipyrimidine
photo-lyase - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 477
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Frame = +1
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPV-SLMGQLMWREFYYTAGTGVA 609
+P T+ LSP++ G +S + +H +++ + + + + + +L WREF Y
Sbjct: 232 QPGTSRLSPHLHFGEISIRAVWHAVRDAQQMQPAAADALDTFLAELGWREFAYHLLWQQP 291
Query: 610 SFDKMVGNAICIQIPWTKND--AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ + + PW ++ A L AW G TG P VDA MR+L GW+H+
Sbjct: 292 ELHRTPIDERFSRFPWREDPDGALLDAWRRGATGIPLVDAGMRELWATGWMHN 344
>UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Putative
photolyase - Protochlamydia amoebophila (strain UWE25)
Length = 471
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T++LSPY+ G +S ++ + +KE + + Q+ WREF + +
Sbjct: 237 TSLLSPYLHFGEISPRMIWQAVKENSTSKGAE----GYLRQIGWREFAHHLLYHFPETPQ 292
Query: 622 MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W + LKAW +G+TGYP +DA MRQL + GW+H+
Sbjct: 293 KPLRSQFNSFSWKNDKQNLKAWQKGQTGYPIIDAGMRQLWKIGWMHN 339
>UniRef50_A4TUK0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Magnetospirillum gryphiswaldense|Rep:
Deoxyribodipyrimidine photo-lyase - Magnetospirillum
gryphiswaldense
Length = 457
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQ-HTLPPVSLMGQLMWREFYYTAGTGVA 609
+P T++LSP+++ G +S + +H + + G HT + +L WREF
Sbjct: 220 KPGTSLLSPHLAFGEISPRQIWHAARALPPGDGIHTF-----LKELGWREFSRHLLARQP 274
Query: 610 SFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ PW + L+ W G+TGYP +DA +RQL Q GW+H+
Sbjct: 275 DLATIPLRPEFRAFPWRDDPEALRKWQMGRTGYPIIDAGLRQLWQTGWMHN 325
>UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 -
Chlamydomonas reinhardtii
Length = 1008
Score = 60.9 bits (141), Expect = 3e-08
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 157 TYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPN---LKELQIDEETLAPVK 327
T+ F + V+++ V P +S S P + S + + E + + L K
Sbjct: 152 TFDDFWNSVRAMPVPPPFPVSAPASMPAVPAAVPSMTVAEVDWFFTPEQEASSDQLK-FK 210
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ G A+ L +++++ + +FE + + ST+ LSP+I G +S + ++++
Sbjct: 211 WKPGVGGAISELEHFLAER--LTEFEHDRAKVD--RDSTSRLSPWIHIGSISVRYIFYRV 266
Query: 508 KEVEN-----GRQHTLPPVSLMGQLMWREF--YYTAGTGVASFDKMVGNAICIQIPWTKN 666
++ + G + Q+ +RE+ Y ++G+ PW +
Sbjct: 267 RQCQAEWLAAGTDRAQSCDDFLQQMGYREYSRYLAFHFPFIHERSLLGHLRAC--PWRID 324
Query: 667 DAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
KAW +G+TGYP VDA MRQL GW H+
Sbjct: 325 QHAFKAWRQGQTGYPIVDAAMRQLWSSGWCHN 356
>UniRef50_Q97VY1 Cluster: Deoxyribodipyrimidine photolyase (DNA
photolyase) (Photoreactivating enzyme); n=5;
Sulfolobaceae|Rep: Deoxyribodipyrimidine photolyase (DNA
photolyase) (Photoreactivating enzyme) - Sulfolobus
solfataricus
Length = 433
Score = 60.9 bits (141), Expect = 3e-08
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +1
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY-YTAGTGVA 609
E + T LSP++ G LS + Y+ L + + +++ QL WR+FY A
Sbjct: 209 EDNRTFLSPHLKFGTLSIREVYYSLLDSQ----------AIIRQLYWRDFYTLLAYYNER 258
Query: 610 SFDKMVGNAI-CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 750
F + + CI+ W N+ +AW EGKTGYP +DA MRQL + G
Sbjct: 259 VFHEPLKREYNCIE--WENNERLFQAWLEGKTGYPIIDAGMRQLNRTG 304
>UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
PhrB protein - Wigglesworthia glossinidia brevipalpis
Length = 475
Score = 60.5 bits (140), Expect = 4e-08
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +1
Query: 340 ETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE-- 513
E AL +LN ++ K K + + + ST+ LSPYI+ G LS + + +K
Sbjct: 202 EEHALNKLNNFIK-----LKINKYHITRDFCINSTSFLSPYINIGVLSLRECINNIKNNN 256
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASF-DKMVGNAICIQIPWTKNDAFLKAWA 690
+ + +++WREF + + F D I W ++AW
Sbjct: 257 FDFIEKKNSGHFKWFSEIIWREFCHHLIIEYSDFFDSKKLIKWTKYIKWENKIKKIQAWK 316
Query: 691 EGKTGYPFVDAIMRQLKQEGWIHH 762
G TG+P +DA MRQLK+ GW+H+
Sbjct: 317 NGTTGFPIIDAAMRQLKKTGWMHN 340
>UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia
brevis|Rep: Cryptochrome dash - Karenia brevis
(Dinoflagellate)
Length = 523
Score = 60.5 bits (140), Expect = 4e-08
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Frame = +1
Query: 136 NNGAVPLTYQKFLSLVKSIN-VKEPI----EISNVLSSHCKPIDIQSENYSIPNLKELQI 300
N PL + F + ++EP+ ++ ++ + C+P D+ +P L EL
Sbjct: 160 NPTKAPLLFSNFKKKAEVFGKIREPLAELTKLPSLPGAVCEP-DLSQALRFMPTLAELGF 218
Query: 301 DEETLAPVKYH---------GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL 453
+ E + ++ GGE AL RL ++ + + ++ + E ++
Sbjct: 219 ESEEINAAEFDDPRGVLPFSGGEDAALTRLQKWIWDDDHLREYWMIRNGMKG-EGYSSKF 277
Query: 454 SPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY-YTAGTGVASFDKMVG 630
SP+++ GCLS + + +++ E R L+ +LMWR+F+ Y A T + G
Sbjct: 278 SPWLALGCLSPRRVWKEVQRYEKERVKNKSTYWLVFELMWRDFFVYMALTHGDKLFRKGG 337
Query: 631 NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ W + L W GKTG VDA M +L GW+
Sbjct: 338 ITGDRKRSWPGSTTDLDRWKNGKTGDLLVDANMLELLATGWM 379
>UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Picrophilus torridus|Rep: Deoxyribodipyrimidine
photolyase - Picrophilus torridus
Length = 431
Score = 60.5 bits (140), Expect = 4e-08
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 2/252 (0%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
D P +++DE I++ + K + N + + D LR +G+ + F + I
Sbjct: 97 DYTPFSIKRDERIKEFSIKNNIKFNALDDYFLSDPE--LRTGSGSFFKNFTAFYNRAMEI 154
Query: 193 NVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHG-GETEALKRLNL 369
NVK+P+ Y I + ID + + +KY+ G A+++++
Sbjct: 155 NVKKPV-------------------YEIKKSNLIPIDGDDME-LKYNNYGRKTAIEKMHN 194
Query: 370 YMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPV 549
++ + F + N T+ LS I G +S + YH +K+ E RQ
Sbjct: 195 FIKNDYSLRDFPELNM--------TSFLSADIKFGNISIREAYHYIKDPEFRRQ------ 240
Query: 550 SLMGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 726
L WR+FY Y A F I W + ++ AW G TGYP VDA
Sbjct: 241 -----LYWRDFYLYIAYHFPYVFGSNFNRKY--NIKWENKEKYIDAWKNGLTGYPIVDAA 293
Query: 727 MRQLKQEGWIHH 762
MR L + G+I++
Sbjct: 294 MRSLNETGYINN 305
>UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rickettsia bellii|Rep: Deoxyribodipyrimidine photo-lyase
- Rickettsia bellii (strain RML369-C)
Length = 475
Score = 60.1 bits (139), Expect = 6e-08
Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 9/260 (3%)
Frame = +1
Query: 10 DDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS 189
+D +P +++D+ ++++ +N H + +VL ++N A + + K
Sbjct: 101 EDYEPNNIERDKKVQELLGSNCT-LNLYCDHLLIKPDRVLTKDNKAYKVYTPYMQAFRKF 159
Query: 190 INVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQID---EETLAPVKYHGGETEALKR 360
I I + +L+++ +D + LK + ++ E L + Y E E +
Sbjct: 160 IADNGSISHNKLLTNYSYNLDGKLYTPQDIELKTIDLNIGKSEALKQIGYVYKEDELWQP 219
Query: 361 LNLYMSKKEWVCK-FEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYHKLKEVENGRQH 534
N +++ + + + + T+ +SPY+ G +S + Y K +
Sbjct: 220 KNAQNVLDKFITRRINRYKIDQDFLYLDGTSTISPYLRFGLVSIRECYRKAFNAASNPGS 279
Query: 535 TLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQ----IPWTKNDAFLKAWAEGKT 702
++ + +L+WREFY T + F V + IPW + + +T
Sbjct: 280 ----ITWINELIWREFYATI---LYHFPNTVNEEFLEKYKNKIPWNNKKEYFDKFINAET 332
Query: 703 GYPFVDAIMRQLKQEGWIHH 762
GYP +DA ++QL +GW+H+
Sbjct: 333 GYPIIDAAVKQLVGDGWMHN 352
>UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase, putative - marine
gamma proteobacterium HTCC2080
Length = 490
Score = 60.1 bits (139), Expect = 6e-08
Identities = 37/142 (26%), Positives = 67/142 (47%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GGE +A + L +++ + +++ S P + LSP+++ G LS + LKE
Sbjct: 194 GGEQQAHQTLEDFLTHRAG--GYQRHISKPEGSRQHCSRLSPHLAWGNLSIRQVQQALKE 251
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAE 693
++ P + +L W + + + N + P +N + AW E
Sbjct: 252 RQSKGGWARPLSAFESRLHWHCHFIQKFESECTMEFESINRGFLNYPRDQNSHLVAAWCE 311
Query: 694 GKTGYPFVDAIMRQLKQEGWIH 759
G+TG+P+VDA MR L+ G++H
Sbjct: 312 GQTGFPYVDACMRCLEATGYLH 333
>UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 400
Score = 59.7 bits (138), Expect = 8e-08
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +1
Query: 301 DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCL 480
D T P + GGE RL Y+ + + K E N +++ S+ LS ++++G L
Sbjct: 170 DPRTAFP--FIGGEAAGRNRLAAYLEQPIFTYK-ETRNGF--NVDDSSK-LSAWLANGSL 223
Query: 481 SAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTA--GTGVASFDKMVGNAICI-QI 651
S + +L+ E L +L+WR+F++ TG F N + ++
Sbjct: 224 SPRRVMAELQRTEQEHGANESTYWLYFELLWRDFFHLTMRETGHRLFRS---NGLKDGRL 280
Query: 652 PWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
W + A + +W G+TG PFVDA MR++K GW+
Sbjct: 281 TWKTDQAAIDSWMAGETGEPFVDAFMREIKDTGWM 315
>UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Sphingopyxis alaskensis|Rep: Deoxyribodipyrimidine
photolyase - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 457
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +1
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVAS 612
+P+T+ LSP++ G +S + +H + E ++ S +L WRE +
Sbjct: 226 QPATSRLSPHLHFGEISPRALWHAIGERDDAGAE-----SYRSELGWREHGINLVDQMPD 280
Query: 613 FDKMVGNAICIQIPWTKN---DAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ G + + W D AW G+TGYP VDA MR+L Q GW+H+
Sbjct: 281 YADRNGRELFDRFAWRTGADADRDFAAWTRGRTGYPVVDAGMRELWQTGWMHN 333
>UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pedobacter sp. BAL39|Rep: Deoxyribodipyrimidine
photolyase - Pedobacter sp. BAL39
Length = 410
Score = 59.7 bits (138), Expect = 8e-08
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 6/256 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
++ PE Q +ED+ K + + + HT+Y+ + L +P + +F K
Sbjct: 87 EVAPEETQISTKVEDLLWKLKINLRHFIGHTLYN-KEDLPFPIKDIPDVFAQF----KKK 141
Query: 193 NVKEPIEISNVLS-SHCKPIDIQSENY-SIPNLKELQIDEETLAPVK--YHGGETEALKR 360
++ + S LS H + +++E++ +P LK+L +EET + GGE L+
Sbjct: 142 TERDAMVKSCFLSPDHIE--FVENEDWGQLPGLKDLGFEEETFPGEEDALRGGEEAGLQH 199
Query: 361 L-NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHT 537
L +L + K+ S+ E ++ LS ++S GCLS ++ Y +KE E+
Sbjct: 200 LSDLLLEGAAVYQKYTAKQSAER--EAFSSRLSGWLSLGCLSPRMVYWMVKEAESKFGSN 257
Query: 538 LPPVSLMGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPF 714
++ L+WR++Y + F K ++ LK W TGYP
Sbjct: 258 ANFNQMLLGLLWRDYYRFMFKKHGTRFFKEPDFESDFFSSVDPANSVLKKWKTADTGYPL 317
Query: 715 VDAIMRQLKQEGWIHH 762
+D M +L G+I +
Sbjct: 318 IDNYMTELNDTGYISY 333
>UniRef50_Q5QV18 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Idiomarina|Rep: Deoxyribodipyrimidine photolyase -
Idiomarina loihiensis
Length = 468
Score = 59.3 bits (137), Expect = 1e-07
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ GE + L +L ++ V +++ P E T+ LS Y++ G + + L
Sbjct: 197 WSAGEQQVLGKLGQFVGHS--VDDYQQARDLP--AENGTSQLSAYLAQGVIGPQTAVRAL 252
Query: 508 KEVENGRQHTLPPVS--LMGQLMWREFYYTAGTGVASFDKMVG-NAICIQIPWTKNDAFL 678
+ L + + +L WREFY V K + I W ++D
Sbjct: 253 HKFSPEFPFGLASGADTWLTELAWREFYQHLMYFVPRLSKGESFQSETDSIQWLEDDDAF 312
Query: 679 KAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W +G+TGYP VDA MRQL GW+H+
Sbjct: 313 QRWCDGRTGYPIVDAGMRQLTSTGWMHN 340
>UniRef50_Q5DZH3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Vibrio fischeri ES114|Rep: Deoxyribodipyrimidine
photolyase - Vibrio fischeri (strain ATCC 700601 /
ES114)
Length = 479
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T+ LSPY++ G +SAK +L N + + L +L+WREFY + K
Sbjct: 242 TSQLSPYLAIGAISAKQCALRLHLEANYELNQGEDIWL-DELIWREFYTHLLHFYPNLSK 300
Query: 622 -MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ I W N + W +G+TG+P VDA M+QL GW+H+
Sbjct: 301 NQAFLSYDKYIEWDNNLDHFERWCKGETGFPIVDAAMKQLNTTGWMHN 348
>UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas atlantica T6c|Rep:
Deoxyribodipyrimidine photolyase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 481
Score = 59.3 bits (137), Expect = 1e-07
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 355 KRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLS-AKLFYHKLKEV-ENGR 528
K+LN ++ E+ + K P S++ T+ +SPY+S G LS A+ +H L+E ++
Sbjct: 218 KKLNAFII--EFSPVYPKNRDIP-SVD-GTSKVSPYLSIGALSPAQCLFHVLQEYGDDAL 273
Query: 529 QHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQ-IPWTKNDAFLKAWAEGKTG 705
+ + ++ WR+FY + + Q W N AW GKTG
Sbjct: 274 SLEHGAYTWIKEIAWRDFYRYVMYHFPHVSRGLPFQKHYQHFKWESNQHHFDAWKAGKTG 333
Query: 706 YPFVDAIMRQLKQEGWIHH 762
YP VDA M L++ GW+H+
Sbjct: 334 YPIVDAAMIALRETGWMHN 352
>UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Neptuniibacter caesariensis|Rep: Deoxyribodipyrimidine
photolyase - Neptuniibacter caesariensis
Length = 468
Score = 58.8 bits (136), Expect = 1e-07
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +1
Query: 325 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHK 504
++ G A K L Y+ +K V +++ P EP T+ LSPY+S G LS +
Sbjct: 205 RWPAGTEAAHKLLQHYVLEK--VADYKQSRDFP--AEPGTSSLSPYLSVGVLSTRQCLAA 260
Query: 505 LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKM--VGNAICIQIPWTKNDAFL 678
++ + Q + +L+WREFY ++ + ++ W +++
Sbjct: 261 MQAYFD--QPEWFDSQWVTELIWREFYRHLLVLFPEMNRWEPFKPEVEEKLSWQYDESLF 318
Query: 679 KAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+AW +G+TG+ VDA M++L + GW+H+
Sbjct: 319 QAWCKGETGFAIVDAGMKELLETGWMHN 346
>UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax
borkumensis SK2|Rep: DNA photolyase - Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
Length = 484
Score = 58.8 bits (136), Expect = 1e-07
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE A ++L+ +M + + + + P+ T+ LS +S G LS + +
Sbjct: 215 GEEAAWQQLDQFMERS--LADYRRNRDFPDL--SGTSGLSVALSAGTLSVASCFRAATQA 270
Query: 517 ENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVG-NAICIQIPWTKNDAFLKAWAE 693
+ +L WR+FY + G + W +D AW E
Sbjct: 271 MADAGSRDGAACWIDELAWRDFYRQIMAQFPRVSRGQGFRPETDLLEWKNDDELFAAWCE 330
Query: 694 GKTGYPFVDAIMRQLKQEGWIHH 762
G+TGYP VDA MRQL GW+H+
Sbjct: 331 GRTGYPLVDAAMRQLVATGWMHN 353
>UniRef50_A7D4K1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 498
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +1
Query: 562 QLMWRE-----FYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAI 726
+L WRE YYT VA++ K N +I W ++D +AW G+TGYP VDA
Sbjct: 301 ELSWREQMYHLLYYTPDLAVANY-KSFPN----EIAWREDDTAFEAWTRGETGYPLVDAG 355
Query: 727 MRQLKQEGWIHH 762
MRQL EG++H+
Sbjct: 356 MRQLNAEGYVHN 367
>UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Streptomyces griseus
Length = 455
Score = 58.8 bits (136), Expect = 1e-07
Identities = 44/152 (28%), Positives = 71/152 (46%)
Frame = +1
Query: 307 ETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSA 486
E L+P GGE K + +++ + +E + + +T+ LSP++ G +SA
Sbjct: 190 ENLSPGLARGGEEAGRKLVTSWLNGP--MADYE--DGHDDLAGDATSRLSPHLHFGTVSA 245
Query: 487 KLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKN 666
H+ +E + G L + + QL WR+F++ D + W +
Sbjct: 246 AELVHRARE-KGG----LGGEAFVRQLAWRDFHHQVLADRP--DASWSDYRPRHDRWRSD 298
Query: 667 DAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ AW G TGYP VDA MRQL EGW+H+
Sbjct: 299 ADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHN 330
>UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16;
Pezizomycotina|Rep: Deoxyribodipyrimidine photo-lyase -
Neurospora crassa
Length = 642
Score = 58.8 bits (136), Expect = 1e-07
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Frame = +1
Query: 277 PNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLS 456
P K L+ DE+ + GE EALKRL + E + K+ + + P T+ LS
Sbjct: 340 PEGKRLRDDEKARYHSLWPAGEHEALKRLEKFCD--EAIGKYAERRNIPAM--QGTSNLS 395
Query: 457 PYISHGCLSAKLFYHKLKEVENGRQHTLPPVSL---MGQLMWREFY--YTAGTGVASFDK 621
+ + G LSA+ ++ N ++ + + ++ WR+FY +K
Sbjct: 396 VHFASGTLSARTAIRTARDRNNTKKLNGGNEGIQRWISEVAWRDFYKHVLVHWPYVCMNK 455
Query: 622 MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
I W+ N AW +G+TG+P +DA MRQ+ G++H+
Sbjct: 456 PFKPTYS-NIEWSYNVDHFHAWTQGRTGFPIIDAAMRQVLSTGYMHN 501
>UniRef50_Q2G0A6 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=15; Staphylococcus|Rep:
Deoxyribodipyrimidine photolyase, putative -
Staphylococcus aureus (strain NCTC 8325)
Length = 457
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +1
Query: 562 QLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 741
+L++REFYY T QI W++N+A AW EG+TG+P +DA + +L
Sbjct: 259 ELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEADFNAWCEGQTGFPIIDAAIMELT 318
Query: 742 QEGWIHH 762
Q G++H+
Sbjct: 319 QTGFMHN 325
>UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteria|Rep: Deoxyribodipyrimidine photolyase -
Robiginitalea biformata HTCC2501
Length = 515
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/143 (23%), Positives = 66/143 (46%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ GGE A RL Y + ++ +++ + ST SP++++G LSA+ Y ++
Sbjct: 251 FRGGEPAAWDRLQEYFWESRFLSTYKRTRNGLVGTRYSTK-FSPWLANGSLSARQIYREV 309
Query: 508 KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAW 687
K E + L+ +L+WR+++ G ++ W + W
Sbjct: 310 KRYEQEVEKNRDTYWLVFELIWRDYFKYVSLKHGPKIFAPGGIREVERDWGASREAFARW 369
Query: 688 AEGKTGYPFVDAIMRQLKQEGWI 756
+G+T F++A M++L+ GW+
Sbjct: 370 TQGETDSDFINANMQELRLTGWM 392
>UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=4; Coxiella burnetii|Rep: Deoxyribodipyrimidine
photolyase-class I - Coxiella burnetii
Length = 472
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSL-MGQLMWREFYYTAGTGVASF 615
ST+ LSPY+ G +S + + + + ++ + + QL+WREF Y
Sbjct: 228 STSHLSPYLHFGEISIRQVWTAITQATIQDKNLQKAADVFLRQLIWREFAYYLLWHFPQM 287
Query: 616 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W KN +L+AW +G TGYP VDA MR+L G++H+
Sbjct: 288 GRSNFRNQFDNFKWKKNKNWLRAWQKGLTGYPIVDAGMRELWCTGYMHN 336
>UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Marinobacter algicola DG893|Rep:
Deoxyribodipyrimidine photolyase family protein -
Marinobacter algicola DG893
Length = 507
Score = 58.0 bits (134), Expect = 2e-07
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GG T+ K L+ ++ ++ ++ SSP S + + LSP+I++G +S + Y + K
Sbjct: 189 GGSTKGHKLLDSFLERR--CIGYQYNMSSPLSAVKACSRLSPHIAYGSVSLREIYQQAKI 246
Query: 514 VENGRQHTLPP-----VSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAF- 675
N R +TLP S +L W + + + + ND+
Sbjct: 247 TGNHR-NTLPRKQKSLTSFRSRLHWHCHFIQKLEDEPELEFRAMHRELEHLKSGPNDSER 305
Query: 676 LKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
L+ W EG+TG+P VDA MR L+ GWI+
Sbjct: 306 LQRWQEGQTGWPLVDACMRALQHTGWIN 333
>UniRef50_A4BCW2 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Reinekea sp. MED297|Rep: Deoxyribodipyrimidine
photolyase - Reinekea sp. MED297
Length = 433
Score = 58.0 bits (134), Expect = 2e-07
Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ GGE+EAL+ L+ Y++ ++ +++ ++ + + S++ +SP+++ G LSA+ KL
Sbjct: 193 FDGGESEALRHLDCYLAS-DYPQTYKRDRNAIDDWD-SSSKMSPWLNAGNLSARRLKQKL 250
Query: 508 KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVG-NAICIQIPWTK--NDAFL 678
E + + L +L+WRE++ + + K+ + P T +D F
Sbjct: 251 DEYDQQHGASDGTHWLFVELLWREYFQWLAQSIGT--KLFHFQGLSEHKPLTSFYSDRF- 307
Query: 679 KAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ W EG T + V+A MRQLK+ G++
Sbjct: 308 RNWREGNTPWAIVNACMRQLKETGYL 333
>UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; uncultured bacterium 580|Rep:
Deoxyribodipyrimidine photolyase family protein -
uncultured bacterium 580
Length = 478
Score = 57.6 bits (133), Expect = 3e-07
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Frame = +1
Query: 70 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 249
K +F K++Q Y + V+R N T++K + V ++E I+ N+ ++ I
Sbjct: 116 KKIFNAKKIQWHEYQTNAVIRGLNNRK--TWEKQWNKV----MREEIKTINLAEANI--I 167
Query: 250 DIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNS 429
NYSIP + ++ P GG K ++ + + + K S P+
Sbjct: 168 SHNFPNYSIPKFR----NDLNYQP----GGCLPGQKEMHDFFETRGQ--DYFKFISKPDR 217
Query: 430 IEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVA 609
S + LSPYI++G LS + Y L + N +L +L W +
Sbjct: 218 SRTSCSRLSPYIAYGNLSMREVYQTLLKSWNKTGWRRSMAALSSRLHWHCHFIQKYESEI 277
Query: 610 SFDKMVGNAICIQIPWT----KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
+ + N P+ +++ FL AWA G+TGYP +DA MR LK+ G+++
Sbjct: 278 DIEDLPINRGYKDFPYKVINCEHEDFL-AWANGETGYPLIDASMRALKKTGYLN 330
>UniRef50_Q21MT8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Saccharophagus degradans 2-40|Rep: Deoxyribodipyrimidine
photolyase - Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024)
Length = 483
Score = 57.6 bits (133), Expect = 3e-07
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Frame = +1
Query: 325 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHK 504
++ GE A K L + K + + + P +++ T++LS ++ G +S + + +
Sbjct: 204 QWQPGEEGAHKNLREAIEDK--IASYTRDRDFP-AVD-GTSLLSAHLRFGEISPRQIWQQ 259
Query: 505 LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPW----TKNDA 672
+ +G Q + QLMWR+F Y + + PW KN A
Sbjct: 260 VATQMDGEQCA----PFLRQLMWRDFSYALLHHWPHIPQQAFKQQFEKFPWQKASNKNVA 315
Query: 673 F-LKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
L AW G TGYP VDA MRQL Q GW+H+
Sbjct: 316 KQLHAWQTGTTGYPIVDAGMRQLWQTGWMHN 346
>UniRef50_A6WVR6 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep:
Deoxyribodipyrimidine photo-lyase - Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 484
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAK-LFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFD 618
T+ LSP++ G +SA+ +Y L ++ + +L+WR+F Y
Sbjct: 244 TSRLSPHLRFGEISARQAWYATLAFMDEHHSARAGGEKFLSELIWRDFNYHQLYHRRDIS 303
Query: 619 KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ I W + A +AW G+TG+P +DA MRQL GW+H+
Sbjct: 304 RHDMRDTLSGIAWRDDRAAFEAWRRGQTGFPIIDAGMRQLWATGWMHN 351
>UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Francisella tularensis subsp. tularensis (strain
WY96-3418)
Length = 499
Score = 57.6 bits (133), Expect = 3e-07
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Frame = +1
Query: 274 IPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL 453
IP + L ++ + + GG AL+ L+ ++ ++ C + K SSP + S + L
Sbjct: 168 IPTAESLGLEYDDCYK-RQKGGRIRALRILDSFLYQRG--CGYTKEMSSPVTAFKSCSRL 224
Query: 454 SPYISHGCLSAKLFYHK-------LKE--VENGRQHTLPPVSLMGQLMWREFYYTAGTGV 606
SPYI+ G +S K Y K +KE V+N + S + +L W +
Sbjct: 225 SPYIAFGVISLKEIYQKANQRKNEIKESSVKNKTKWLSAMRSFLSRLRWHCHFMQKLEDQ 284
Query: 607 ASFDKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
S + ++ Q+ N +AW G TGYP +DA MR L GW++
Sbjct: 285 PSIEYENLHSAYDQLRTEPLNQQCFEAWKTGNTGYPMIDACMRALIATGWLN 336
>UniRef50_Q0I8L2 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=4; Bacteria|Rep: Deoxyribodipyrimidine
photolyase family protein - Synechococcus sp. (strain
CC9311)
Length = 504
Score = 57.2 bits (132), Expect = 4e-07
Identities = 45/147 (30%), Positives = 69/147 (46%)
Frame = +1
Query: 319 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 498
P + GG + AL L+ ++ + + + SSPN+ + LS Y++ GCLS +
Sbjct: 185 PHRQSGGRSMALLELDDFLEHR--APGYARSISSPNTAFTGCSRLSAYLTWGCLSMREVI 242
Query: 499 HKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFL 678
+ +GR + S +L W + S + + + T ND L
Sbjct: 243 QTSRGF-SGRGIS----SFESRLHWHCHFIQKLEAQPSIEFEDFHPFMRGLRCT-NDQRL 296
Query: 679 KAWAEGKTGYPFVDAIMRQLKQEGWIH 759
AWAEG+TG PFVDA MR L+ GWI+
Sbjct: 297 LAWAEGRTGVPFVDACMRALRAHGWIN 323
>UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica
rapa|Rep: Cryptochrome 1 protein - Brassica campestris
(Field mustard)
Length = 704
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYH--KLKEV---ENGRQHTLPPVSL-MGQLMWREFY-YTAG 597
+T+ LSP++ G +S + +H ++K+V G Q V+L + + RE+ Y +
Sbjct: 268 TTSFLSPHLHFGEVSVRKVFHLLRIKQVAWANEGNQAGEESVNLFLKSIGLREYSRYISF 327
Query: 598 TGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
S ++ + + PW ++ + KAW +G+TGYP VDA MR+L GW+H
Sbjct: 328 NHPYSHERPLLGHLKF-FPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLH 380
>UniRef50_Q9KK82 Cluster: Hypothetical DNA photolyase; n=3;
Actinomycetales|Rep: Hypothetical DNA photolyase -
Brevibacterium linens
Length = 487
Score = 56.8 bits (131), Expect = 6e-07
Identities = 35/108 (32%), Positives = 48/108 (44%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFD 618
ST+ LSP + HG LS + + + Q + + QL WREF + D
Sbjct: 263 STSRLSPRLRHGELSPRQLLQAARTTSSLTQDDR--AAWIRQLYWREFSWHLTYHYPHID 320
Query: 619 KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
P+ +D L W G TGYP +DA M QL Q GW+H+
Sbjct: 321 SAPIRPEFHNFPYEDDDDALTHWRAGTTGYPLIDAGMAQLWQTGWMHN 368
>UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Rhodobacterales|Rep: Deoxyribodipyrimidine
photolyase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 536
Score = 56.4 bits (130), Expect = 7e-07
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Frame = +1
Query: 241 KPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSS 420
KP SE + +P L D+ P + GG A+ L ++ + ++K SS
Sbjct: 169 KPSAADSEEWPLPQDFGLGADD---CPQRQKGGRMAAVDCLRSFLESRGRT--YQKSMSS 223
Query: 421 PNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV--ENGRQHTLPPVSLMG----QLMWREF 582
P + + + LSP+++ G +S + + ++ E+GR + +G +L W
Sbjct: 224 PLTAADACSRLSPHLAFGTVSIREAWQAAQKAQHEHGRSGDTGFAASIGSFISRLQWHCH 283
Query: 583 YYTA---GTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGW 753
+ T + S + G P D L AW EG+TG+PF+DA MR L++ GW
Sbjct: 284 FIQKLEDQTSIESRNLHPGYDGLRPEPLA-GDPRLAAWIEGRTGFPFLDACMRSLRETGW 342
Query: 754 IH 759
++
Sbjct: 343 LN 344
>UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6;
Francisella tularensis|Rep: Deoxyribodipyrimidine
photolyase - Francisella tularensis subsp. novicida
(strain U112)
Length = 464
Score = 56.4 bits (130), Expect = 7e-07
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYHKLKEVE---NGRQHTLPPVSLMGQLMWREF-YYTAGTGV 606
ST+ LSPY+ G +S ++ ++ ++ N +H + +L+WR+F YY
Sbjct: 228 STSKLSPYLHFGEISPSQIFNAVQSLDYIGNNEEHFIK------ELVWRDFSYYQIYYYP 281
Query: 607 ASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+K + N W + LK W +G+TG P VDA MR+L Q G++H+
Sbjct: 282 ELHNKNI-NQKFDSFKWDNDPTLLKKWQKGQTGIPIVDAGMRELWQTGYMHN 332
>UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Bacillus sp. NRRL B-14911|Rep: Deoxyribodipyrimidine
photolyase - Bacillus sp. NRRL B-14911
Length = 474
Score = 56.0 bits (129), Expect = 1e-06
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = +1
Query: 331 HGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHK-L 507
+GGE ++ L ++ E + +EK P + S++ LSPY+++G +S +L YH+
Sbjct: 186 NGGEKRGIETLEFFIG--EQLANYEKNYQKPLASSFSSSRLSPYLAYGNISPRLAYHEAA 243
Query: 508 KEVENGRQHTLPPVSL-MGQLMWREFYYTAGTGVASFDKMV-GNAICIQIPWTKNDAFLK 681
K+ EN + +SL +L+ R + +K NA + L+
Sbjct: 244 KKAENCTETEKQQLSLFQSKLLER------SEALQWQEKETQANAADSNSARAHDAELLE 297
Query: 682 AWAEGKTGYPFVDAIMRQLKQEGWIHH 762
W G TG P VDA MR L++ GW+++
Sbjct: 298 KWRTGNTGIPSVDASMRCLRKTGWLNY 324
>UniRef50_Q5V0Z1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Haloarcula marismortui|Rep: Deoxyribodipyrimidine
photolyase - Haloarcula marismortui (Halobacterium
marismortui)
Length = 534
Score = 56.0 bits (129), Expect = 1e-06
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Frame = +1
Query: 301 DEETLAPVKY---HGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISH 471
D +AP K GG A +RL+ + + + + S+P T+ LSPY++
Sbjct: 197 DHYDIAPSKSDVPRGGTGPARERLSAFAER---IDDYPGNISAPVDARDGTSGLSPYLAF 253
Query: 472 GCLSAKLFYHKLKE-VENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQ 648
GCLS + + E +GR + + +L W + Y + + N +
Sbjct: 254 GCLSVRQVIQYIDEHAPDGRGKEM----FVSRLFWNKHYEQKLEDWPGWLETAVNPVLEG 309
Query: 649 IPWTKNDAFL-KAWAEGKTGYPFVDAIMRQLKQEGWIH 759
+ D L AW G+TG+P VDA MR L+Q GW++
Sbjct: 310 FNAEQYDPDLVAAWKHGQTGFPMVDASMRCLRQTGWLN 347
>UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:
Cryptochrome-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 681
Score = 56.0 bits (129), Expect = 1e-06
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYH--KLKEV---ENGRQHTLPPVSL-MGQLMWREFY-YTAG 597
+T+ LSP++ G +S + +H ++K+V G + V+L + + RE+ Y +
Sbjct: 246 TTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISF 305
Query: 598 TGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
S ++ + + PW ++ + KAW +G+TGYP VDA MR+L GW+H
Sbjct: 306 NHPYSHERPLLGHLKF-FPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLH 358
>UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Jannaschia sp. (strain CCS1)
Length = 517
Score = 55.6 bits (128), Expect = 1e-06
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Frame = +1
Query: 253 IQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI 432
+ E SIP+ ++L + + P + GG L L +++ + ++ + SSP
Sbjct: 164 VSEEPGSIPDARDLALAFDP-CPGRQAGGRDGGLATLASFLTARGQ--EYRRAMSSPLDG 220
Query: 433 EPSTTVLSPYISHGCLSAKLFYHKLK----EVENGRQHTLPPV-SLMGQLMWREFYYTAG 597
+ + LSP+++ G LS++ H + EV+ R L + S ++ WR+ +
Sbjct: 221 AAACSRLSPHLAWGTLSSREVLHGMAARRAEVKGTRDGWLGSLRSFEARVAWRDHFMQKL 280
Query: 598 TGVASFD-KMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
+ + + + +A P + L AW +G+TG PFVDA MR L GWI+
Sbjct: 281 EDQPAMEIRCLHSAYEDLRPNVPDATRLSAWEKGETGIPFVDACMRSLIATGWIN 335
>UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Synechococcus sp. RCC307|Rep: Deoxyribodipyrimidine
photolyase - Synechococcus sp. (strain RCC307)
Length = 467
Score = 55.6 bits (128), Expect = 1e-06
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Frame = +1
Query: 337 GETEALKRLNLYMSKK-EWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GET AL++L + ++ E C+ + P + T+ LS + G LS + + +
Sbjct: 203 GETAALEQLEHFAARAMEHYCE---GRNLPG--DEGTSTLSAALRAGSLSPRTAWAASLD 257
Query: 514 VENGRQHTLPPVSL---MGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKA 684
V + + S+ +L WREFY A Q PW + LKA
Sbjct: 258 VWSHCRSDEQRQSVTVWQQELAWREFYQQALFHFPELADGPYRPQWRQFPWEDDPVRLKA 317
Query: 685 WAEGKTGYPFVDAIMRQLKQEGWIHH 762
W +G TG P VDA MRQL Q G++H+
Sbjct: 318 WQDGLTGVPIVDAAMRQLVQTGFMHN 343
>UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteriales|Rep: Deoxyribodipyrimidine photolyase -
Flavobacteria bacterium BAL38
Length = 486
Score = 55.6 bits (128), Expect = 1e-06
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Frame = +1
Query: 232 SHCKPIDIQS-EN-YSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFE 405
S K I+I+ EN + +P++K + P GG AL+ +N + ++ V +
Sbjct: 161 SFVKYIEIEELENAFDVPSIKTVH------NPNFQKGGVPTALRYMNSFFEER--VQNYS 212
Query: 406 KPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY 585
S P + LSPYI+ G +S + Y K E+ + + +L W+ +
Sbjct: 213 NHISKPELGRKGCSRLSPYIAWGNISIRQVYTKAWEMHQQGKFKRQISNFASRLRWQAHF 272
Query: 586 YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
++ + + N + N+ + KAW GKTG P VDA MR L G+++
Sbjct: 273 IQKFEMESTMEFIAVNKGYRNLIQRVNEKYHKAWITGKTGVPLVDACMRCLNTTGYLN 330
>UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella frigidimarina (strain NCIMB 400)
Length = 504
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Frame = +1
Query: 400 FEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYH----KLKEVENGRQHTLPPV-SLMGQ 564
+++ SSP+ + LSPY++ G +S K Y + EV+ + P+ ++M +
Sbjct: 215 YQRSISSPSLSRTHCSRLSPYLAWGNISLKQVYQATLTRYNEVQTSNKAWRKPLLAMMSR 274
Query: 565 LMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAF---LKAWAEGKTGYPFVDAIMRQ 735
L W + S + N + P+ +D ++ WA+G+TG P +DA MR
Sbjct: 275 LHWHCHFMQKFESQCSMEFTPVNPGYVDYPYRTDDKVQQDIQRWADGQTGIPIIDACMRC 334
Query: 736 LKQEGWIH 759
LK+ G+I+
Sbjct: 335 LKETGYIN 342
>UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Congregibacter litoralis KT71
Length = 482
Score = 54.8 bits (126), Expect = 2e-06
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE A +RL+ ++ +E V ++ P E ++ LSP++ HG LS + + ++
Sbjct: 204 GEDGAQQRLHDFL--EESVSRYADERDFP--AEEVSSRLSPHLHHGELSPRQVWAMCEQK 259
Query: 517 ENGRQHTLPPVS-LMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAE 693
+ + + ++ WREF Y + PW + L+ W +
Sbjct: 260 KLETPASEKAIKKFQAEIGWREFSYHLLHFFPEIPEKAFKENFADFPWQPDKTRLERWQQ 319
Query: 694 GKTGYPFVDAIMRQLKQEGWIHH 762
G+TGYP VDA MR+L G +H+
Sbjct: 320 GQTGYPIVDAGMRELWATGTMHN 342
>UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22;
Gammaproteobacteria|Rep: Cryptochrome DASH - Vibrio
cholerae
Length = 461
Score = 54.8 bits (126), Expect = 2e-06
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Frame = +1
Query: 145 AVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPV 324
A+P T+ +F V++I++ P+ +VL PI+ + + +P L ++ + A V
Sbjct: 149 ALPSTFTQFRKQVETISLSAPMGYPHVLP----PIE---QGWQLP-LMDIVTEPNHSAFV 200
Query: 325 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHK 504
GGE L Y S ++++ + + ++ ST SP+++ G +S K Y
Sbjct: 201 ---GGEQAGLTHCQNYFSSL-LPSRYKETRNGLDGMDYSTK-FSPWLALGAVSPKTIYAM 255
Query: 505 LKEVENGRQHTLPPVSLMGQLMWRE-FYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLK 681
L+ E + +L+WRE FY+ A A + G + FL+
Sbjct: 256 LQRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ 315
Query: 682 AWAEGKTGYPFVDAIMRQLKQEGWI 756
W G+T +P V+A MRQL Q G++
Sbjct: 316 -WKHGETPFPIVNACMRQLNQTGYM 339
>UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Psychroflexus torquis ATCC 700755|Rep: Putative
deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 485
Score = 54.4 bits (125), Expect = 3e-06
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GG AL+ L ++ + ++K S P S + LSPYI+ G LS + E
Sbjct: 192 GGRPTALRYLKGFLQDR--YPNYQKNISKPLLARKSCSRLSPYIAWGVLSMREVIQASIE 249
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGTGV--ASFDKMVGNAICIQIPWTKNDAFLKAW 687
+++ +H +L W+ + A F ++ P+ K A +AW
Sbjct: 250 IQDKTKHKQALSQFQSRLRWQAHFIQKFEMEYHAEFQNFNSAFNVLEKPYNK--ALAEAW 307
Query: 688 AEGKTGYPFVDAIMRQLKQEGWIH 759
+G+TG+P VDA M+ L Q G+++
Sbjct: 308 KKGETGFPLVDASMKCLIQTGYLN 331
>UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3;
Halobacteriaceae|Rep: Photolyase/cryptochrome -
Haloarcula marismortui (Halobacterium marismortui)
Length = 464
Score = 54.4 bits (125), Expect = 3e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 646 QIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+I W ++ +AW G+TGYPF+DA MRQL+QEG+IH+
Sbjct: 295 RIEWENDEDNFEAWKHGETGYPFIDAGMRQLEQEGYIHN 333
>UniRef50_Q4T4M6 Cluster: Chromosome undetermined SCAF9582, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF9582, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 755
Score = 54.0 bits (124), Expect = 4e-06
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Frame = +1
Query: 340 ETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVE 519
E A RL ++ + V +++K + ++ P+T+ +SPY+ G LS + K
Sbjct: 332 EEGAHARLEAFLG--DGVYRYDKESGRADA--PNTSCVSPYLHFGQLSPRWVLWDAKAAR 387
Query: 520 NGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAI---CIQIPWTKNDAFLKAWA 690
P +L WR+ Y ++ F ++ ++ + W+ + LKAW
Sbjct: 388 ------CRPPKFQRKLAWRDLAYWQ---LSLFPELPWESLRPPYKALRWSSDRRHLKAWQ 438
Query: 691 EGKTGYPFVDAIMRQLKQEGWIHH 762
G TGYP VDA MRQL GW+++
Sbjct: 439 RGGTGYPLVDAAMRQLWLTGWMNN 462
>UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Frankia sp. EAN1pec|Rep: Deoxyribodipyrimidine
photolyase - Frankia sp. EAN1pec
Length = 409
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = +1
Query: 562 QLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 741
+L WREFY G S + + + +AW G+TGYP VDA MRQL
Sbjct: 215 ELAWREFYADVLAGTPSSARTDLTDTLAALAYEPPGDTFEAWKWGRTGYPIVDAGMRQLL 274
Query: 742 QEGWIHH 762
EGW+H+
Sbjct: 275 AEGWVHN 281
>UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase
family protein; n=9; cellular organisms|Rep: FAD binding
domain of DNA photolyase family protein - Tetrahymena
thermophila SB210
Length = 486
Score = 54.0 bits (124), Expect = 4e-06
Identities = 37/124 (29%), Positives = 58/124 (46%)
Frame = +1
Query: 391 VCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLM 570
V ++K +P SIE TT +S ++ G +S + + K + + + +L+
Sbjct: 264 VKNYDKTRDTP-SIE-GTTRMSVHLRFGTVSIRDLVRRSKGLN---------ATYLNELI 312
Query: 571 WREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEG 750
WR+FY + ++ W N AW EGKTGY VDA MRQL Q G
Sbjct: 313 WRDFYMMILDQFPHVENNNFKPAYDKLVWRNNVDEFMAWCEGKTGYHLVDAGMRQLNQTG 372
Query: 751 WIHH 762
++H+
Sbjct: 373 YMHN 376
>UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Lyngbya sp. PCC 8106
Length = 512
Score = 53.6 bits (123), Expect = 5e-06
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Frame = +1
Query: 244 PIDIQSENYSIP-NLKELQIDE-------ETLAPVKYHGGETEALKRLNLYMSKKE--WV 393
PI + + IP NL +L DE + + GGE EA K LN ++ + +
Sbjct: 158 PIPTKLKTPEIPLNLTQLTFDELQQKYNFNSQNSALFTGGEVEAQKTLNSWLKSRYNGYH 217
Query: 394 CKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLK----EVENGRQHTLPPVSLMG 561
K +P + T+ LS +++ G +S + Y + K E++ + S
Sbjct: 218 WKLSRPQIATLG---GTSHLSAHLAFGTISTRQVYQQTKARANELKENAKAQFALKSFRN 274
Query: 562 QLMWRE-----FYYTAGTGVAS----FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPF 714
L WR+ YY + FDK + ++ K + F +AW +GKTG+P
Sbjct: 275 CLRWRDSAIQRLYYFPELAYQNCYPEFDKWYSDG---ELEGEKLEYF-QAWQQGKTGFPL 330
Query: 715 VDAIMRQLKQEGWIH 759
VDA M+QL+ GW++
Sbjct: 331 VDASMKQLQSMGWMN 345
>UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase;
n=1; alpha proteobacterium HTCC2255|Rep:
Deoxyribodipyrimidine photolyase - alpha proteobacterium
HTCC2255
Length = 441
Score = 53.2 bits (122), Expect = 7e-06
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Frame = +1
Query: 286 KELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYI 465
K+L ET+ + GGE +A ++++ Y + + ++++ + E S+ LSP++
Sbjct: 203 KKLLAKNETVQ--RLIGGELKAKEQMHHYTYGTQALSEYKETRNGLEGWEFSSK-LSPWL 259
Query: 466 SHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGT--GVASFDKMVGNAI 639
+ GC+S + + E E L +L+WREF+ G A + + N I
Sbjct: 260 AAGCISPRQVAAAITEYEAQHGANDSTYWLFFELLWREFFQWQQLKHGKALYHR---NGI 316
Query: 640 CIQIP-WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ P N + W G T YP ++A MRQLK G++
Sbjct: 317 QQKSPRGFHNKKVFEDWVNGDTAYPIINACMRQLKYTGFM 356
>UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=1; Bdellovibrio bacteriovorus|Rep:
Deoxyribodipyrimidine photolyase-class I - Bdellovibrio
bacteriovorus
Length = 435
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +1
Query: 556 MGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQ 735
+ +L+WR+F+ + +I W K+ A + W EG+TGYP VDA MR+
Sbjct: 257 LSELIWRDFFMQILWHFPQVENQSFRPEYDKIAWRKSKADFQKWCEGRTGYPLVDAGMRE 316
Query: 736 LKQEGWIHH 762
L G++H+
Sbjct: 317 LNATGYMHN 325
>UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4;
rosids|Rep: Cryptochrome 2A apoprotein - Pisum sativum
(Garden pea)
Length = 629
Score = 52.8 bits (121), Expect = 9e-06
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 10/258 (3%)
Frame = +1
Query: 19 DPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV 198
DP + +D I++ + G+ + +Y+ ++ E A T+ F +
Sbjct: 104 DPVSLVRDHNIKEKLVELGISVKSYNGDLLYEPWELYDEKGHAFT-TFDPFWERCLHKQM 162
Query: 199 KEPIEISNVLSSHCKPIDIQSENYSIPNL---KELQIDEETLAPVKYHGGETEALKRLNL 369
EP+ + + P + E SI +L EL+ L + G A K L
Sbjct: 163 -EPVSL--IPPWQLIPAKGKVERCSIEDLGLENELEKPSNALLGRAWSPGWGNANKALTE 219
Query: 370 YMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYH--KLKEVENGRQHTL- 540
+M K+ + + K ST++LSPY+ G LS + + ++K++ G +
Sbjct: 220 FMDKQ--LLNYSKNRQKVGG--DSTSLLSPYLHFGELSVRKVFQMARVKQISWGNEGNSV 275
Query: 541 --PPVSL-MGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGY 708
V+L + + RE+ Y + ++ + + PW + + K W +G+TGY
Sbjct: 276 GKESVTLFLRAIGLREYSRYLCFNFPFTHERALLGHLSF-FPWNADPSNFKTWRQGRTGY 334
Query: 709 PFVDAIMRQLKQEGWIHH 762
P VDA MR+L GW+H+
Sbjct: 335 PLVDAGMRELWATGWMHN 352
>UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinobacter aquaeolei VT8|Rep: Deoxyribodipyrimidine
photo-lyase - Marinobacter aquaeolei (strain ATCC 700491
/ DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 505
Score = 52.4 bits (120), Expect = 1e-05
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Frame = +1
Query: 319 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 498
P + GG A+ L+ ++ ++ ++ SSP + + + LSP+++ G +S + Y
Sbjct: 184 PDRQAGGSERAIALLDSFLERR--CVGYQYNMSSPLTAPRACSRLSPHLAWGTISLRDVY 241
Query: 499 HKLKEVENGRQHTLPP-----VSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTK 663
+ KE + R +TLP S +L W + + + +
Sbjct: 242 QQSKETGDHR-NTLPRKKKSLTSFRSRLHWHCHFIQKLEDEPELEFRAMHRELEHLKTGP 300
Query: 664 NDAF-LKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
N++ L W EG+TG+P VDA MR L+ GWI+
Sbjct: 301 NNSERLHRWQEGQTGWPLVDACMRSLEHTGWIN 333
>UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 642
Score = 52.4 bits (120), Expect = 1e-05
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Frame = +1
Query: 286 KELQIDEETLAPVK-YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPY 462
K+ DEE K + G A KR++ ++ + + S+P + ST+ LS Y
Sbjct: 358 KQFSSDEEKKRIRKLWPAGHAAASKRMDAFLKT---IDSYAATRSNP--AKDSTSRLSAY 412
Query: 463 ISHGCLSAKLFYHKLKEVENG-----RQHTLPPV-SLMGQLMWREFY-YTAGTGVASFDK 621
S G S + K+ + +G P V + ++++RE Y T T +
Sbjct: 413 FSAGMFSVRSALQKVADYNHGSTDFTESSARPGVYGWVREIVFRELYRQTTLTTPHTSMN 472
Query: 622 MVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
M N + W ++ + W +G+TG PF+DA MRQL E ++H+
Sbjct: 473 MPQNLKFDFVQWEDDEEGWEKWYKGETGEPFIDAGMRQLNHEAYMHN 519
>UniRef50_Q14N08 Cluster: Putative deoxyribodipyrimidine photolyase
protein; n=1; Spiroplasma citri|Rep: Putative
deoxyribodipyrimidine photolyase protein - Spiroplasma
citri
Length = 435
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 562 QLMWREFYYTAGTGVASFDKMVGNAIC---IQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 732
QL WR+FYY + + I I WT N + + W G+TGY F+DA M+
Sbjct: 258 QLAWRDFYYQVTYNAQLHQQWCFSENWNKKITINWTNNLEWFQKWQNGETGYDFIDAGMK 317
Query: 733 QLKQEGWIHH 762
+LK+ G +H+
Sbjct: 318 ELKETGLLHN 327
>UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Leptospirillum sp. Group II UBA
Length = 536
Score = 52.0 bits (119), Expect = 2e-05
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Frame = +1
Query: 337 GETEALKRLNLYMSK--KEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLK 510
GE A +RLN ++ K K + K + + E ++++LSP++++G +S + + ++
Sbjct: 262 GEEGARRRLNAFLEKRLKNYAVKRDFLD------EDTSSLLSPHLANGEISIRSVWWSIR 315
Query: 511 EVENGRQHTLPPVSLMGQLMWREF---YYTAGTGVASFDKMVGNAICIQIPWTKNDAFLK 681
E + + +L WREF +A+ G +I W ++ + L
Sbjct: 316 ESTAPEEDR---AKFLSELGWREFSAHLMWHHPDLATQPLQKGRP---EIAWREDPSSLL 369
Query: 682 AWAEGKTGYPFVDAIMRQLKQEGWI 756
AW +G+TG P VDA MRQL++ G++
Sbjct: 370 AWQKGRTGIPLVDAGMRQLRRLGFL 394
>UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 545
Score = 52.0 bits (119), Expect = 2e-05
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Frame = +1
Query: 190 INVKEPIEISNVLSSHCKPIDIQSENYSIPNL--KELQIDEETLAPVKYHGGETEALKRL 363
I +KEP+ N+ P ++ + + +++ + + PV G A K L
Sbjct: 183 IFMKEPLATPNLAQLKAMPYEVTDFAFLFDYVTGQKIHLYSKNYQPV----GMRSAQKYL 238
Query: 364 NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLP 543
+ K+ + ++ + P S + LSPY++ G LS + Y +++ H
Sbjct: 239 KAF--GKKCIVQYTTQHKQPALSNQSNSHLSPYLAWGNLSVRQVYQHCQQLMIDSPHRAN 296
Query: 544 PVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDA 723
+ + L + GN +Q+ + L+AW G+TG+P VDA
Sbjct: 297 FETYLHHLRMHCQCIQKFEMEDYLEFEAGNEAYLQLEQNHKNDLLEAWKNGQTGFPLVDA 356
Query: 724 IMRQLKQEGWIH 759
MR ++Q G+++
Sbjct: 357 SMRCIRQTGYLN 368
>UniRef50_A4S782 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 565
Score = 52.0 bits (119), Expect = 2e-05
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Frame = +1
Query: 397 KFEKPNSSPNSIEPST-TVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMW 573
KFE + + + P+ + LSPY+ HG +S + YH+L + G + ++ W
Sbjct: 151 KFEDDHGRADIVAPAAVSTLSPYLRHGQISPRQIYHELATKKMGSDGV--EGKKLSRVFW 208
Query: 574 -----REF-YYTAGTGVASFDKMVGNAICIQIPWTKND---AFLKAWAEGKTGYPFVDAI 726
REF Y+ K V + W + D L W G TG+P VDA
Sbjct: 209 HRLYRREFAYWQLHNWPELPSKSVRGHYENRKAWLEGDEAAVALHRWQTGTTGFPTVDAG 268
Query: 727 MRQLKQEGWIH 759
MR+L GW+H
Sbjct: 269 MRRLWATGWMH 279
>UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photolyase -
Haloquadratum walsbyi (strain DSM 16790)
Length = 719
Score = 52.0 bits (119), Expect = 2e-05
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 415 SSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 594
S+P T+ LSPY + G LS + + + V N +L+W Y
Sbjct: 326 SAPQDARTGTSGLSPYFNFGLLSIRQVH---QYVNNNTPECRGRRMFTSRLIWNCHYNQK 382
Query: 595 GTGVASF-DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
A + D+ V A N A + AW G+TG+P VDA MR L++ GW++
Sbjct: 383 LADWAGWTDRAVNPAFEEFNADRHNPALVDAWKHGQTGFPMVDASMRCLRETGWLN 438
>UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Magnetococcus sp. (strain MC-1)
Length = 476
Score = 51.6 bits (118), Expect = 2e-05
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 325 KYHG----GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKL 492
K+HG GE A R ++S + +++ P T+ LS + +G LS
Sbjct: 200 KWHGIWSMGEEAAQTRFEHFLS--HGLACYDQGRDFPG--RDCTSRLSTALQYGLLSPNQ 255
Query: 493 FYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDA 672
++ L+ + +H++ +L WREF Y S PW +++
Sbjct: 256 VWYGLEHAK-ADEHSVD--KFRSELAWREFAYYQLFHFPSLPHKNFQPKFDHFPWLEDEV 312
Query: 673 FLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
L W G+TG P VDA MR+L Q G +H+
Sbjct: 313 ALGRWQTGQTGIPIVDAGMRELWQTGVMHN 342
>UniRef50_P61496 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Thermus thermophilus|Rep: Deoxyribodipyrimidine
photo-lyase - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 420
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/102 (31%), Positives = 52/102 (50%)
Frame = +1
Query: 451 LSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVG 630
LSPY + G LS +L + + G + V+ +L+WR+F Y +
Sbjct: 212 LSPYFALGVLSPRLAAWEAER--RGGEGARKWVA---ELLWRDFSYHLLYHFPWMAERPL 266
Query: 631 NAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ +PW +++A +AW EG+TG P VDA MR+L G++
Sbjct: 267 DPRFQALPWQEDEALFRAWYEGRTGVPLVDAAMRELHATGFL 308
>UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24;
Betaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Azoarcus sp. (strain BH72)
Length = 503
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 556 MGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQ 735
+ +L+WR+FY +I W A AW EG+TGYP VDA MRQ
Sbjct: 300 LSELIWRDFYQMILWHHPRVVDQAFRPEFDRIRWDDAPALFDAWREGRTGYPIVDAGMRQ 359
Query: 736 LKQEGWIHH 762
L + G++H+
Sbjct: 360 LLRSGYMHN 368
>UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep:
Cryptochrome 2 - Oryza sativa (Rice)
Length = 651
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYH-----KLKEVENGRQHTLPPVSL-MGQLMWREF--YYTA 594
+T++LSPY+ G +S + Y ++K G + M + RE+ Y
Sbjct: 243 TTSLLSPYLHFGEVSVRKVYQLVRMQQIKWENEGTSEAEESIHFFMRSIGLREYSRYLCF 302
Query: 595 GTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++GN PW ++ K+W +G TGYP VDA MR+L GW H+
Sbjct: 303 NFPFTHEKSLLGNLK--HYPWKVDEERFKSWRQGMTGYPLVDAGMRELWATGWTHN 356
>UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Alteromonadales|Rep: Deoxyribodipyrimidine photolyase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 445
Score = 50.4 bits (115), Expect = 5e-05
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKL 507
+ GGE AL +L + + +++ + + + S+ LSP++++GCLS + + +L
Sbjct: 206 FTGGEDAALAQLEYTLFTSHNIKNYKQTRNGLDGWDYSSK-LSPWLANGCLSVRQVFTEL 264
Query: 508 KEVENGRQHTLPPVSLMGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKA 684
+ E+ + L +L+WRE++ + + + G P T A A
Sbjct: 265 RRYESEYEKNDSTYWLYFELLWREYFQWHLFKYQSKLFQFSGTQ--DTRPLTTFVALRFA 322
Query: 685 -WAEGKTGYPFVDAIMRQLKQEGWI 756
W +G+T YP V+A M+QL G++
Sbjct: 323 MWCQGETPYPIVNACMKQLNHTGYM 347
>UniRef50_A0UAX4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Burkholderia multivorans ATCC 17616
Length = 476
Score = 50.4 bits (115), Expect = 5e-05
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE- 513
GE A +RL ++ E + ++ +P + T+ LS ++ +G ++ L+E
Sbjct: 204 GEGGAWERLEQFVD--EALAEYGDARDAPARL--GTSRLSAHLHYGEITPTQILRTLQER 259
Query: 514 VENGRQHTLPPVS-LMGQLMWREF-----YYTAGTGVASFDKMVGNAICIQIPWTKNDAF 675
V P + + +L WREF Y+ T A+FD W +D
Sbjct: 260 VARTSGSVRPDLEPFLRELGWREFAHHLLYHFPHTTDANFDARFD-----AFAWAPDDGE 314
Query: 676 -LKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
L W +G+TG P VDA MRQL Q GW+H+
Sbjct: 315 QLARWQQGRTGIPLVDAGMRQLWQTGWMHN 344
>UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyase;
n=1; Methylophilales bacterium HTCC2181|Rep:
deoxyribodipyrimidine photo-lyase - Methylophilales
bacterium HTCC2181
Length = 465
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 MGQLMWREFYYTAGTGVASF-DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMR 732
+ +L+WR+FY+ + D Q+ + N F +AW G+TG+P +DA M
Sbjct: 264 LNELIWRDFYFQILSNFPHINDGKSFKPQFNQLRFENNVTFFEAWKNGRTGFPIIDAAMH 323
Query: 733 QLKQEGWIHH 762
QL + G++H+
Sbjct: 324 QLNKTGFMHN 333
>UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Legionella pneumophila|Rep: Deoxyribodipyrimidine
photolyase - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 471
Score = 50.0 bits (114), Expect = 6e-05
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVS-LMGQLMWREFYYTAGTGVASF 615
+T+ LSP++ G +S + L+ + L V + +L WREF
Sbjct: 230 ATSRLSPHLHFGEISPWVILRALELAKLEHTCDLASVEHFLSELGWREFSVYLLYHFPKL 289
Query: 616 DKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
D PW ++ L W +G TGYP +DA MR+L G++H+
Sbjct: 290 DCENFRKEFDAFPWQNDEQLLTCWQKGMTGYPIIDAGMRELWATGYMHN 338
>UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Corynebacterineae|Rep: Deoxyribodipyrimidine photo-lyase
- Rhodococcus sp. (strain RHA1)
Length = 446
Score = 49.6 bits (113), Expect = 8e-05
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY-----YTAGTG 603
+T+ +S Y+ +G + + L R+ + QL WR+FY +
Sbjct: 217 ATSRMSVYLKYGNIHPRTMLRDL-----ARRRSTSAEQYRRQLAWRDFYADILFQRPDSA 271
Query: 604 VASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++D+ + I +A+ AW EG+TG+P VDA MRQLK E W+H+
Sbjct: 272 RGNYDRRFDH-IRYDSGSDAEEAYT-AWCEGRTGFPIVDAGMRQLKAEAWMHN 322
>UniRef50_A5GT79 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain RCC307)
Length = 503
Score = 49.6 bits (113), Expect = 8e-05
Identities = 40/162 (24%), Positives = 73/162 (45%)
Frame = +1
Query: 274 IPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL 453
IP+ +L++ + P + GG ++ L ++ + ++ K SSP + S + L
Sbjct: 192 IPSADDLKLPSDP-CPGRQRGGRSQGAALLESFLHHRGR--RYAKELSSPLTAFESCSRL 248
Query: 454 SPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGN 633
S +++ G LS + + + NG P + + +L W + S + +
Sbjct: 249 SAHLTFGTLSMREIVQTAR-LNNG------PKAFVERLHWHCHFIQKLESQPSLEYQNAH 301
Query: 634 AICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
+ + L W EG+TG+PFVDA MR L+ GWI+
Sbjct: 302 RAYDGLR-ADDPQRLALWIEGRTGWPFVDACMRALRHHGWIN 342
>UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Sphingomonadales|Rep: Deoxyribodipyrimidine photolyase -
Sphingomonas sp. SKA58
Length = 458
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = +1
Query: 427 SIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGV 606
S+E T+ LSP++ +G +S +H++ + L +L+WR++ +T +
Sbjct: 227 SVE-GTSRLSPHLHYGEVSPAYVWHRVTASNADAEIFLK------ELIWRDYTHTQICEM 279
Query: 607 ASFDKMVGNAICIQIPWT---KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++ ++ W + AW +G+TGYP VDA MRQL GW+H+
Sbjct: 280 PAYGSKNARDDFDRMDWRDLREARGDFVAWKKGRTGYPIVDAGMRQLWTTGWMHN 334
>UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 565
Score = 49.2 bits (112), Expect = 1e-04
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 10/211 (4%)
Frame = +1
Query: 160 YQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPN--LKELQIDEETLAPVKYH 333
Y+K S + +++ EP++ + KP YS+P+ L+ + + L V
Sbjct: 257 YKKSTSEICHLHIIEPLKYNETFE--LKPFQ-----YSLPDEFLQYIPKSKWCLPDVS-- 307
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIE-PSTTVLSPYISHGCLSAKLFYHKLK 510
E AL RL ++ K K N+ + + T+ LS YI+ G +S +L ++
Sbjct: 308 --EEAALSRLKDFLGTKS-----SKYNNEKDMLYLGGTSGLSVYITTGRISTRLIVNQAF 360
Query: 511 EVENGR------QHTLPPVSLMGQLMWREFY-YTAGTGVASFDKMVGNAICIQIPWTKND 669
+ NG+ + + + ++ WR+FY + + M + I W N
Sbjct: 361 QSCNGQIMSKALKDNSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNP 420
Query: 670 AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W G TG P VDAIMR+L G+I++
Sbjct: 421 VAFEKWCTGNTGIPIVDAIMRKLLYTGYINN 451
>UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 440
Score = 48.8 bits (111), Expect = 1e-04
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Frame = +1
Query: 292 LQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISH 471
+ +D+ + + GGE + L+ L Y + + +++ ++ + E S+ S +++
Sbjct: 188 INLDDNRSSALCITGGEQKGLEHLYDYFNGS-YALQYKATRNALDGWENSSK-FSYWLAQ 245
Query: 472 GCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY--YTAGTGVASFDKMVGNAICI 645
G LS +L +L++ E+ + L +L+WREF+ Y+ G F + I
Sbjct: 246 GSLSVRLILQELRQFESLHSNNESTEHLYMELLWREFFQWYSHFYGKQLF---YFSGIQK 302
Query: 646 QIPWTK--NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ P T AF + W EG T +P V+A M QL+ G++
Sbjct: 303 KRPLTTFYPQAF-RMWLEGHTEWPLVNACMNQLRTTGYM 340
>UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Limnobacter sp. MED105|Rep: Deoxyribodipyrimidine
photolyase - Limnobacter sp. MED105
Length = 453
Score = 48.8 bits (111), Expect = 1e-04
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Frame = +1
Query: 319 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 498
P++ GG T+A + + + + + SSP + LSPY+++G +S +
Sbjct: 189 PLRMKGGRTQARAVAAKFFTPAK-LKSYPFSISSPLKAWNGCSRLSPYLAYGVVSDREVL 247
Query: 499 HKLKEVEN-----GRQHTLPPVS-----LMGQLMWREFYYTAGTGVASFDKMVGNAICIQ 648
KL + N G + V + +L+WR+ Y + + + +A
Sbjct: 248 QKLNALVNTVHGQGDSVLISKVEDAARFYVDRLIWRQGYLQQ---LENHTGLETDAFYGD 304
Query: 649 IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
P N FL AW G+TG+ ++DA L+Q GW++
Sbjct: 305 EPAEVNQEFLNAWQHGRTGFAYIDACQHFLQQTGWLN 341
>UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
uncultured marine bacterium EB0_41B09
Length = 424
Score = 48.8 bits (111), Expect = 1e-04
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Frame = +1
Query: 136 NNGAVPLTYQKFLSLVKSINVK--EPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEE 309
N +P + KF ++S VK +P I+ +++ +D +S + + +
Sbjct: 140 NLNDLPDVFTKFRKEIESREVKPIKPSLINQRINAIKSIVDEESNEIEMEQMSYPK-SSF 198
Query: 310 TLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAK 489
++ ++ GGE + L Y S + ++K + I+ ST SP+++ G +SA+
Sbjct: 199 PISEDRFFGGEEKGFTFLEAYFSSNK-PSTYKKTRNELMGIDFSTK-FSPWLASGYISAR 256
Query: 490 LFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTK-- 663
Y L E + +L+WRE++ + K + + + + K
Sbjct: 257 QVYDFLLSYELNVIKNESTYWIFFELLWREYFRLI---FKKYGKKIFHRYGLGLSDEKVS 313
Query: 664 -NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+D + W EG+T F++A M++LK+ G++
Sbjct: 314 HSDENFELWKEGRTASNFINAGMKELKETGFL 345
>UniRef50_Q2S3L9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 463
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 553 LMGQLMWREFY----YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVD 720
L+ Q WR+FY + + + + +G IPW W EG TG PFVD
Sbjct: 263 LISQFYWRDFYTHLLFHRPEQLTTSLRPIGR----HIPWRNERGEFDRWHEGATGVPFVD 318
Query: 721 AIMRQLKQEGWIHH 762
A MR+L++ G++H+
Sbjct: 319 AGMRELRETGYMHN 332
>UniRef50_A6GPG1 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Limnobacter sp. MED105|Rep:
Deoxyribodipyrimidine photolyase family protein -
Limnobacter sp. MED105
Length = 559
Score = 48.0 bits (109), Expect = 3e-04
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Frame = +1
Query: 322 VKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYH 501
++ GG +A + L+ ++S++ +FE SSP S E + + LSPY++ G +S +
Sbjct: 216 LRQRGGRQQAQRCLSEFLSERGMNYRFEM--SSPLSAESACSRLSPYLAFGVISIREMLE 273
Query: 502 KLKEVENGRQHT--LPPV---------SLMGQLMWREFYYTAGTGVASFDKMVG----NA 636
L + + LP S +L W + + NA
Sbjct: 274 ALSQARQQLTESSLLPKAQTQWKQSLKSFESRLHWHCHFIQKLESEPELEFRSAHRGLNA 333
Query: 637 I--CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
+ ++ +N L AW EG+TG+P VDA MR L+ GW++
Sbjct: 334 MRNFAELSPEENQKAL-AWIEGRTGFPMVDACMRMLRATGWVN 375
>UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Acidothermus cellulolyticus 11B|Rep:
Deoxyribodipyrimidine photo-lyase - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 497
Score = 48.0 bits (109), Expect = 3e-04
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Frame = +1
Query: 478 LSAKLFYHKL--KEVENGRQHTLPPVSL---MGQLMWREFY-----YTAGTGVASFDKMV 627
LSA L + L + V + + T+ +L + +L WREF+ + S+D +
Sbjct: 280 LSADLHFGTLHPRTVRDAARKTVEGPALDRFLAELAWREFFADVLWHRPDAAWHSWDP-I 338
Query: 628 GNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
G + + + F AWA G+TGY VDA MRQL EGW+H+
Sbjct: 339 GRHLAVDDGPQARERFT-AWARGETGYGLVDAGMRQLLSEGWMHN 382
>UniRef50_Q31DQ9 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Thiomicrospira crunogena XCL-2|Rep:
Deoxyribodipyrimidine photolyase family protein -
Thiomicrospira crunogena (strain XCL-2)
Length = 479
Score = 47.6 bits (108), Expect = 3e-04
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE +A + +++ E + +E+ P +I+ T+ LSP++ G L ++ +L +
Sbjct: 206 GEHKAWSKFETFIT--EGLANYEQDRDFP-AID-GTSQLSPHLHFGELHSRAIVFELLSL 261
Query: 517 ENGRQHTLPPVSL-MGQLMWREF-----YYTAGTGVASFD-KMVGNAICIQIPWTKNDAF 675
E + + + QL WREF ++ T F K + +++
Sbjct: 262 ETEPTIANQAIRVWLRQLAWREFARAILWHFPHTETHPFQAKFETFYRPLAEDDSESSKN 321
Query: 676 LKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+AW EG+TG P +DA M+QL + GW+H+
Sbjct: 322 YQAWCEGRTGVPIIDAGMKQLWETGWMHN 350
>UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Psychrobacter|Rep: Deoxyribodipyrimidine photo-lyase -
Psychrobacter sp. PRwf-1
Length = 550
Score = 47.6 bits (108), Expect = 3e-04
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Frame = +1
Query: 316 APVKYHGGETEALKRLNLYMSK--KEWVCKFEKP---NSSPNSIEPSTTVLSPYI----S 468
A Y GE A+ RLN ++ + +E+ ++P +S S + ++SP + +
Sbjct: 258 ARADYPAGEQAAIDRLNSFVQQDIEEYGITRDQPALMGTSQLSAYLTLGIISPRLCYLTA 317
Query: 469 HGCLSAKLFYHKLKEVENGRQHTLPPVSL-MGQLMWREFYYTAGTGVASFDKMVG--NAI 639
+ L +K F ++E ++ V + +L WR+FY K
Sbjct: 318 NARLESKSFADNESKLEIFENNSKSDVERWISELAWRDFYRHVTVDRPDIVKGAAYKKDT 377
Query: 640 CIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++ W+ ++ +AW +G TG P +DA MR L Q G++H+
Sbjct: 378 DNKLNWSYDNDDFEAWCQGMTGVPLIDAAMRCLNQTGFMHN 418
>UniRef50_A3JBH1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Marinobacter sp. ELB17|Rep: Deoxyribodipyrimidine
photolyase - Marinobacter sp. ELB17
Length = 519
Score = 47.2 bits (107), Expect = 4e-04
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Frame = +1
Query: 319 PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY 498
P++ GG ++A+K LN + + ++ ++ SSPN+ + +S Y+++G +S + +
Sbjct: 189 PLRQKGGRSQAIKNLNRFFTVP-YLKQYPFQISSPNTAWQGCSRISTYLAYGIVSDRELF 247
Query: 499 HKLKEVENGRQHTLPPVSL----------MGQLMWREFY---YTAG------------TG 603
+ V + + +L WR Y + A G
Sbjct: 248 QAVDRVVTDAHSRMNADQFGKFQENARFYLDRLSWRRQYMQTFEASPELEFQCMLAQFNG 307
Query: 604 VASFDKMVGNAIC-IQIPWT-KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
V D G+++ P + +++ AW +G TG+P++DA MR L Q GWI+
Sbjct: 308 VREADYSEGHSLTHSSTPSSGQSEQHFTAWKQGLTGFPYIDAAMRFLNQTGWIN 361
>UniRef50_A3JA18 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Marinobacter|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 488
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 649 IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ W D +AW G+TG P VDA MRQL + W+H+
Sbjct: 326 LQWNTADEHFEAWKNGRTGIPMVDAAMRQLNETSWMHN 363
>UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 514
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +1
Query: 562 QLMWREFY----YTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIM 729
QL WREFY Y V K I W + + AW G+TGYP VDA M
Sbjct: 313 QLAWREFYTQVLYHNPEVVTENYKEYEEGIA----WRDDPDEIAAWKRGETGYPIVDAGM 368
Query: 730 RQLKQEGWIHH 762
RQL++E ++H+
Sbjct: 369 RQLREEAFMHN 379
>UniRef50_Q7M8M8 Cluster: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA
PHOTOLYASEPHOTOREACTIVATING ENZYME; n=1; Wolinella
succinogenes|Rep: DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA
PHOTOLYASEPHOTOREACTIVATING ENZYME - Wolinella
succinogenes
Length = 447
Score = 46.4 bits (105), Expect = 8e-04
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = +1
Query: 382 KEWVCKFEKPNSSPNSIEP-STTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLM 558
+E+ K + +S+E +T+ LS ++ G L + +LK + P
Sbjct: 198 EEFSSKITRYALDRDSLEAEATSGLSLFLRFGTLGVREVIRRLKVWQEEGIKVAP---FY 254
Query: 559 GQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQL 738
Q++WREFY ++ + Q+ W+++ L+ W +G+ G P VDA MR+L
Sbjct: 255 RQILWREFYAMLLYHFPHSEREDFKPM--QMRWSESQERLERWQKGECGVPLVDAGMREL 312
Query: 739 KQEGWIHH 762
G++H+
Sbjct: 313 NHTGFMHN 320
>UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Silicibacter pomeroyi
Length = 481
Score = 46.0 bits (104), Expect = 0.001
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 337 GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV 516
GE AL+RL+ +++ + +++ P T+ LS +S G + + +H+ E
Sbjct: 205 GEAAALERLDRFIATG--IGQYDACRDLPAG--DGTSTLSDALSLGEIGPRTLWHRAGEA 260
Query: 517 EN-GRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKN--DAFLKAW 687
+ G Q + + QL+WR+F Y PW + D AW
Sbjct: 261 AHKGAQGA---ETFLKQLVWRDFAYHLMYHTPHLLSENWRPGWEVFPWATDPADPGFVAW 317
Query: 688 AEGKTGYPFVDAIMRQLKQEGWIHH 762
G+TG P VDA MR++ G +H+
Sbjct: 318 TRGRTGVPLVDAAMREMYVTGRMHN 342
>UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6;
Xanthomonas|Rep: Photolyase-like protein - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 484
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 TTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDK 621
T+ LSP++ G ++ L E + ++ + QL WR+F Y
Sbjct: 248 TSQLSPHLHFGEIAPWRIASTL-EAQRSARNGADIDGYIRQLGWRDFAYHLLHHFPDTTT 306
Query: 622 MVGNAICIQIPW-TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
N W T + L AW G+TG P VDA +RQL GW+H+
Sbjct: 307 QNLNPRFAGFDWATVDPVTLDAWQRGRTGIPIVDAGLRQLWHTGWMHN 354
>UniRef50_Q4E3Z7 Cluster: DNA photolyase, putative; n=4;
Trypanosoma|Rep: DNA photolyase, putative - Trypanosoma
cruzi
Length = 875
Score = 46.0 bits (104), Expect = 0.001
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Frame = +1
Query: 451 LSPYISHGCLSAKLFYHKLKE--VENGRQHTLPPV--SLMGQLMWREFYYTAGTGVAS-- 612
+SPY+S+G LS + FY L+ EN R + + + +L R++++ G
Sbjct: 545 VSPYLSNGSLSPRRFYEMLRRYATENLRDNFVQMQYREALLRLSRRDYWHWMGLRYGPLL 604
Query: 613 -FDKMVGNAICIQIP-WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
F IP W ++ ++ W G TG PF DA MR+L G++ H
Sbjct: 605 FFPYGPRPEQTDNIPDWRHDEKIVQKWCAGLTGVPFADAAMRELLTTGFVAH 656
>UniRef50_A0YDZ0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
marine gamma proteobacterium HTCC2143
Length = 528
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 664 NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
N+ +AWA G TGYPF+DA MR L +GWI
Sbjct: 327 NEERYQAWATGHTGYPFIDACMRNLIADGWI 357
>UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 453
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 562 QLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLK 741
+L WREFY + ++ + + L AW G+TG+ VDA MRQL+
Sbjct: 262 ELAWREFYADVLHARPETARQYLRPEFARMRYDEPGEHLDAWRHGRTGFSVVDAGMRQLR 321
Query: 742 QEGWIHH 762
GW+H+
Sbjct: 322 ATGWMHN 328
>UniRef50_A0HIH4 Cluster: DNA photolyase, FAD-binding; n=1;
Comamonas testosteroni KF-1|Rep: DNA photolyase,
FAD-binding - Comamonas testosteroni KF-1
Length = 431
Score = 45.2 bits (102), Expect = 0.002
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GGE+ AL L Y+++ +++ + ++ S+ S +++ G LS + Y +L++
Sbjct: 213 GGESAALAHLRQYLARG-LPHSYKRTRNGLVGLDYSSK-WSLWLATGALSPRQAYAELRQ 270
Query: 514 VENGRQHTLPPVSLMGQLMWREFYYTAGT--GVASFDKMVGNAICIQIPWTKNDAFLKAW 687
E R T L +L+WR+++ G A + + ++ +D AW
Sbjct: 271 FEATRGATESSYWLWFELLWRDYFRFLHMQHGRALYR---ARGLGPELATPHDDQNFAAW 327
Query: 688 AEGKTGYPFVDAIMRQLKQEGWI 756
G+TG VDA MR+L G++
Sbjct: 328 CSGQTGQTLVDAAMRELAATGYL 350
>UniRef50_Q4P1U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 623
Score = 44.8 bits (101), Expect = 0.002
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 25/168 (14%)
Frame = +1
Query: 328 YHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSI--EPSTTVLSPYISHGCLSAKLFYH 501
Y GGETEAL RL+ Y + + C + N + +T ++ G LS +L
Sbjct: 287 YRGGETEALARLDHYFDRSD-SCPAASYKQTRNQMLGTDYSTKFGAALALGLLSPRLIAQ 345
Query: 502 KLKEVENGRQHTLPPVSLMG-------QLMWREFYYTAGTGVAS---------FDKMVGN 633
K E++N S G +L+WR+++Y G S D +
Sbjct: 346 KATELDNATHDATHNASNKGGGYWIIFELLWRDYFYFVGWKFGSKLFSLRGIEDDISARS 405
Query: 634 AICIQIPW-------TKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
A W ++D F++ W +TG P +DA M ++ Q G++
Sbjct: 406 APSKASEWKSSASLSDRDDGFVR-WCTAQTGVPLIDANMVEMVQTGFM 452
>UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase,
putative; n=1; alpha proteobacterium HTCC2255|Rep:
deoxyribodipyrimidine photolyase, putative - alpha
proteobacterium HTCC2255
Length = 501
Score = 44.0 bits (99), Expect = 0.004
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = +1
Query: 415 SSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEV-ENGRQHTLPPVSLM-GQLMWREFYY 588
SSP S T LSPYI+ G ++ K Y KL + E Q +S M +L W +
Sbjct: 227 SSPELSRKSCTRLSPYIAWGNITIKQTYQKLDTLNEADYQGWKRALSAMVSRLHWHCHFI 286
Query: 589 TAGTGVASFDKMVGNAICIQIPWT-KNDAF---LKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ + N P+ D LKAW G TG P VDA MR + G+I
Sbjct: 287 QKFESECAMEMRPVNHAYQAYPYEIDQDVISRRLKAWKTGTTGIPIVDANMRAVIATGYI 346
Query: 757 H 759
+
Sbjct: 347 N 347
>UniRef50_A3Z202 Cluster: Deoxyribodipyrimidine photolyase-related
protein; n=1; Synechococcus sp. WH 5701|Rep:
Deoxyribodipyrimidine photolyase-related protein -
Synechococcus sp. WH 5701
Length = 504
Score = 44.0 bits (99), Expect = 0.004
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Frame = +1
Query: 445 TVLSPYISHGCLS-AKLFYHKLKEVE---NGRQHTLPPVSLMGQLM----WREFYYTAGT 600
++LSP ++ G LS A + L V+ NG Q +P SL G L WREF
Sbjct: 264 SLLSPLLNIGLLSPAGVIEATLAHVQRRQNGEQ-PVPIASLEGFLRQVIGWREF------ 316
Query: 601 GVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 765
V D++ G + W W +G TG P +DA + +L + G+ HH+
Sbjct: 317 -VRGIDRVHGETQASRNFWNHRRRLAPCWTDGSTGLPPLDAAIERLNRTGYNHHI 370
>UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 159
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV 183
D +P Q+D I IA G+ + HT+YD+ ++ N +PL + +FL ++
Sbjct: 102 DTEPFAQQRDSVISHIARSAGIEVKTHASHTLYDIESLVSHCNENIPLVFDEFLEMI 158
>UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thermobifida fusca YX|Rep: Deoxyribodipyrimidine
photolyase - Thermobifida fusca (strain YX)
Length = 419
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 649 IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
I W +D+ AW G+TG P VDA MRQL EG++
Sbjct: 278 IQWRDDDSAFAAWCSGRTGVPIVDAGMRQLLWEGYV 313
>UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrio|Rep: Deoxyribodipyrimidine photolyase - Vibrio
shilonii AK1
Length = 472
Score = 43.6 bits (98), Expect = 0.006
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GGE L + Y + + + N N S+T S ++++G +S + ++L
Sbjct: 235 GGELAGLGHVRDYFATQAALSYKSTRNELDNW--SSSTKFSLWLANGNVSPRAVVNQLHR 292
Query: 514 VENGRQHTLPPVSLMGQLMWREFY--YTAGTGVASFDKMVGNAICIQIPWTKNDAF-LKA 684
E ++ +L+WRE++ Y+ G F I + P T A L+
Sbjct: 293 FEQKHGSNESTYWILFELLWREYFHWYSHKYGAKLF---AFGGIQDKRPLTTFYASRLRQ 349
Query: 685 WAEGKTGYPFVDAIMRQLKQEGWI 756
W EG T +P V+A M QL++ G++
Sbjct: 350 WVEGNTPFPIVNACMNQLRETGYM 373
>UniRef50_Q4Q4G2 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Leishmania|Rep: Deoxyribodipyrimidine
photolyase, putative - Leishmania major
Length = 541
Score = 43.6 bits (98), Expect = 0.006
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 26/277 (9%)
Frame = +1
Query: 10 DDIDPEFVQQDEYIEDIAEKKGVF-INKRVQHTVYDVHKVLRENNGAVPLT---YQKFLS 177
+D P + +D + D A+K+G+ + +++ + +V++++ + Y KF +
Sbjct: 130 EDYTPFALARDRLLRDYADKQGIVCVTGPHDYSLRPLDEVVKDSEQPYSVFTPFYNKFTA 189
Query: 178 L-VKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEAL 354
+ + V + +S V + + Q + +L + + + V+ HGG TE +
Sbjct: 190 EHARKVAVPLMVNVSKVQAM----LVSQPKKCLEHHLVDPALVYTHMPQVQDHGGRTEGM 245
Query: 355 KRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQH 534
KRL K++ + + T+ LSP++ G +S + +H + G H
Sbjct: 246 KRLACVERLKQYA------DVRDDIAGDRTSHLSPHMKCGTVSTREVWHASVQAL-GTGH 298
Query: 535 TLPPVSLMGQLMWREFY----YTAGTGV-ASFDKMVGNAICIQIPWTKNDA--------- 672
+ QL+WREFY +T + + +G ++ K +A
Sbjct: 299 -----AFTRQLVWREFYAMLAFTRPRLLQGQLNSFIGQQDIVKATQPKQNAPFQPLYDNY 353
Query: 673 -------FLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+A+ EG+TG P VDA +R L GW H+
Sbjct: 354 KWSWKAEHFEAFKEGRTGVPLVDAAVRCLTATGWCHN 390
>UniRef50_Q4FNW5 Cluster: Deoxyribodipyrimidine photolyase-related
protein; n=2; Candidatus Pelagibacter ubique|Rep:
Deoxyribodipyrimidine photolyase-related protein -
Pelagibacter ubique
Length = 496
Score = 43.2 bits (97), Expect = 0.007
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Frame = +1
Query: 445 TVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLM----WREFYYTAGTGVAS 612
+ LSPYI+ G ++ ++ K+ E ++H + SL G + WREF G +
Sbjct: 264 SALSPYINLGLITPEIIIQKILEFH--KKHKIRMNSLEGYIRQIIGWREFMRGIYQGYS- 320
Query: 613 FDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHL 765
D+M + K+W EG TG P +D ++ GW HH+
Sbjct: 321 -DEMETKNF-----FNHERKMKKSWYEGTTGLPPLDHAIKNAVNHGWSHHI 365
>UniRef50_Q9RIY2 Cluster: Deoxiribopirymidine photolyase; n=1;
Streptomyces coelicolor|Rep: Deoxiribopirymidine
photolyase - Streptomyces coelicolor
Length = 415
Score = 42.3 bits (95), Expect = 0.013
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 694 GKTGYPFVDAIMRQLKQEGWIHH 762
G+TGYP VDA MRQL+ +GW+H+
Sbjct: 268 GRTGYPVVDAAMRQLRHQGWMHN 290
>UniRef50_Q389M9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Trypanosoma brucei|Rep:
Deoxyribodipyrimidine photolyase, putative - Trypanosoma
brucei
Length = 568
Score = 42.3 bits (95), Expect = 0.013
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Frame = +1
Query: 271 SIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEW-VCKFEKPNSSPNSIEPSTT 447
S+ + +L +T + GG +E L RL S K + + + P TT
Sbjct: 231 SLVDYVDLAALPQTFPELVDRGGRSEGLLRLASVASAKNYSAIRDDIPGDK-------TT 283
Query: 448 VLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYY------------- 588
LSP++ G +S + ++ + G++H + QL+WREFY
Sbjct: 284 HLSPHLKFGTISIREAM-QVALLHLGKEH-----AFTRQLIWREFYSMLLYHNPRLALGQ 337
Query: 589 ----TAGTGVASFDKMVGNAICIQ----IPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQ 744
A G + N ++ W NDA A+ G TG+P VDA +R L +
Sbjct: 338 LKMDVAPQGERQCRATLANEPFLEKYSNFQWEWNDAEFTAFKSGATGFPLVDAAVRCLTK 397
Query: 745 EGWIHH 762
GW H+
Sbjct: 398 TGWCHN 403
>UniRef50_Q9KS67 Cluster: Cryptochrome-like protein cry2; n=15;
Gammaproteobacteria|Rep: Cryptochrome-like protein cry2
- Vibrio cholerae
Length = 504
Score = 41.5 bits (93), Expect = 0.022
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +1
Query: 415 SSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 594
SSP+ + + +SPY++ G +S + Y L + + ++L +L W +
Sbjct: 218 SSPSLARHACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQK 277
Query: 595 GTGVASFDKMVGNAICIQIPWTKNDA---FLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
+ N + +DA L AW G TG P VDA MR L Q G+++
Sbjct: 278 FESECEMEFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLN 335
>UniRef50_Q2S050 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Deoxyribodipyrimidine photolyase, putative -
Salinibacter ruber (strain DSM 13855)
Length = 537
Score = 41.1 bits (92), Expect = 0.029
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 670 AFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
A AW G+TG+P VDA MR L+ GW++
Sbjct: 355 ALYDAWLHGRTGFPMVDACMRHLRATGWLN 384
>UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Alteromonas macleodii 'Deep ecotype'|Rep:
Deoxyribodipyrimidine photolyase, putative - Alteromonas
macleodii 'Deep ecotype'
Length = 451
Score = 40.3 bits (90), Expect = 0.051
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKE 513
GGE A + L + + + + + S P + + LSPY++ G +S K Y ++
Sbjct: 225 GGERRAWQVLKDFFNDRGQY--YHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQR 282
Query: 514 VENGRQHTLPP----------VSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTK 663
++ ++ LP +L +L W + S + N+ P+
Sbjct: 283 QKH-KKRALPIHEKKRWSRALSALTSRLHWHCHFIQKFESEHSIEWRPMNSAYENFPYID 341
Query: 664 NDAFLKA---WAEGKTGYPFVDAIMRQLKQEGWIH 759
+ W+ G+TGYP VDA MR L+Q G+++
Sbjct: 342 GPEAERRFYHWSIGQTGYPLVDACMRALRQTGYLN 376
>UniRef50_Q4QHY9 Cluster: DNA photolyase, putative; n=3;
Leishmania|Rep: DNA photolyase, putative - Leishmania
major
Length = 934
Score = 39.9 bits (89), Expect = 0.068
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +1
Query: 451 LSPYISHGCLSAKLFYHKLKEVE--NGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKM 624
+SPYI+ G LS + +Y L+E N R + G L Y G+ D++
Sbjct: 599 VSPYIALGALSPRKYYEVLREFAQANQRDAFVQQQFREGLLRLSRRDYWHWMGLRFGDRL 658
Query: 625 VGN-----AICIQIP-WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWI 756
+ +P W + ++ W +G TG PF DA MR+L G++
Sbjct: 659 FFSYGPHPEHTDDVPEWRHDRKVVQRWCDGLTGIPFADAAMRELVGTGFV 708
>UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Hahella chejuensis KCTC 2396|Rep: Deoxyribodipyrimidine
photolyase - Hahella chejuensis (strain KCTC 2396)
Length = 491
Score = 39.5 bits (88), Expect = 0.090
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 664 NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++A +AW G+TG+P +DA M+ L GWI++
Sbjct: 305 DEAKFEAWKNGETGFPLIDAAMKALINYGWINY 337
>UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Psychromonas ingrahamii (strain 37)
Length = 517
Score = 39.5 bits (88), Expect = 0.090
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 8/150 (5%)
Frame = +1
Query: 334 GGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYH--KL 507
GGE A K L +++ + F+ S P + S + LSPY++ G +S + FY +
Sbjct: 204 GGELWAQKMLQSFLNGRGKNYHFDI--SKPQASRKSCSRLSPYLAWGNISLRQFYQIILM 261
Query: 508 KEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFD-KMVGNAIC-IQIP----WTKND 669
K +NG + P +L +L W + + V A P +
Sbjct: 262 KRPQNGWKR--PIDALASRLHWHCHFIQKFESEHQMQWRPVNRAYSNFSYPDLHCGLSVE 319
Query: 670 AFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
L W +TGYP VDA M L + G+I+
Sbjct: 320 TRLNKWKTAQTGYPLVDACMLCLIKTGYIN 349
>UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protein;
n=1; Corynebacterium diphtheriae|Rep: Putative
riboflavin biosynthesis protein - Corynebacterium
diphtheriae
Length = 446
Score = 38.7 bits (86), Expect = 0.16
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 478 LSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPW 657
LS +L + +L E H QLMWR+F + PW
Sbjct: 242 LSPRLRFGELSVAEVWN-HAHTSEGFRRQLMWRDFAWHRLDAHPDMATANIRPEFDHFPW 300
Query: 658 TKND--AFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
D A L AW G+TG VDA MR+L G +H+
Sbjct: 301 DGGDFEAELNAWRHGRTGIALVDAGMRELWATGTMHN 337
>UniRef50_Q1J4U4 Cluster: NlpC/P60 family protein; n=1;
Streptococcus pyogenes MGAS10750|Rep: NlpC/P60 family
protein - Streptococcus pyogenes serotype M4 (strain
MGAS10750)
Length = 859
Score = 38.7 bits (86), Expect = 0.16
Identities = 44/178 (24%), Positives = 72/178 (40%)
Frame = +1
Query: 4 PADDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV 183
P ++D + V D+Y I + K F +K + K++ EN A K
Sbjct: 20 PEKNMDSKLVHSDDYTNKIIKNKDRFGDKISEKE----SKLIHENVLAKDQKQDKLKDFQ 75
Query: 184 KSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKRL 363
K+ N KE I VL + K + + N I + ++DEE +K ++E + +
Sbjct: 76 KAKN-KERIR-KEVLDNKNKAEETKQTNLEIRTDESYKLDEELDVDIKKVNFDSENSRNI 133
Query: 364 NLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHT 537
N + + +P S+ S VL Y + S F K+ E E+ R HT
Sbjct: 134 NSNKLTTDDISAKAQPISNKKS-SSKRQVLKNYENKFIHSKDKFQDKINERESKRIHT 190
>UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2;
Arabidopsis thaliana|Rep: Blue-light photoreceptor PHR2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 447
Score = 37.9 bits (84), Expect = 0.27
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
++ + V+ + IE +++GV + T+Y + + + +P Y F V+ +
Sbjct: 218 EVSHDEVKAEGKIETAMKEEGVEVKYFWGSTLYHLDDLPFKIED-LPSNYGAFKDKVQKL 276
Query: 193 NVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYH----GGETEALKR 360
+++ I + L S D++ + IP+L +L I + GGETEAL R
Sbjct: 277 EIRKTIAALDQLKSLPSRGDVELGD--IPSLLDLGISPTPRTSQEGKPTMVGGETEALTR 334
Query: 361 LNLYMSKKEWVCKFEKPNSSPNSIEPS--TTVLSPYISHGCLSAKLFYHKLKEVENGRQH 534
L + + + NS+ + + +SP+++ G +S + + +LK+ +
Sbjct: 335 LKSFAADCQARLSKGNQKGGNNSVFGANFSCKISPWLAMGSISPRSMFDELKKTISASTT 394
Query: 535 TLPPVS---------LMGQLMWREFY 585
+ P + LM +L+WR+F+
Sbjct: 395 STTPRNGPGDTGLNWLMYELLWRDFF 420
>UniRef50_A3I0F4 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 365
Score = 37.1 bits (82), Expect = 0.48
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 415 SSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTA 594
+S N + + T LSPYIS G +S + +K + L+ +L WR+++
Sbjct: 25 ASRNFQDGAVTQLSPYISRGVISTNQVFEYIKSLNFPWSQC---EKLVQELAWRDYWQQV 81
Query: 595 --GTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
G A F+ + Q P +N A + KTG VD + L Q G++H+
Sbjct: 82 WLAKGEAIFEDLKNE----QKP-VQNHQIPSAIIQAKTGIEAVDQGILDLYQTGYMHN 134
>UniRef50_Q9KR11 Cluster: Protein tolB precursor; n=59;
Proteobacteria|Rep: Protein tolB precursor - Vibrio
cholerae
Length = 450
Score = 36.3 bits (80), Expect = 0.84
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 301 DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTT---VLSPYISH 471
D +TLA V + G+ E + +N+Y K+E + F + N +P T VLS +
Sbjct: 230 DGQTLAYVSFQNGQAE-IYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNL 288
Query: 472 GCLSAKLFYHKLKEVENGRQHTLPP 546
+ L +L EV +GR + P
Sbjct: 289 QVYTMDLATRRLTEVTSGRSNNTEP 313
>UniRef50_UPI00006CBB71 Cluster: hypothetical protein
TTHERM_00565620; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00565620 - Tetrahymena
thermophila SB210
Length = 852
Score = 35.9 bits (79), Expect = 1.1
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Frame = +1
Query: 109 YDVHKVLRENNGAVPLTYQKFLSLVKSIN------VKEPIEISNVLSSH--CKPIDIQSE 264
+D++K+ E A + FLS SIN +K+ I I LS C+P +
Sbjct: 258 FDINKLTLEQFSAYQFSRNPFLSK-DSINFEQSSLIKKAIPIEKCLSYKFLCEPCFELAN 316
Query: 265 NYSIPNLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPN---SIE 435
N S +++ +Q ++ + KYH + + + ++K+ + + ++ + N I+
Sbjct: 317 NLSQDSIQSVQNEQTIKSKSKYHKIQKSVNQIADCQTTEKKLIYESDQNDEEQNYYQKIQ 376
Query: 436 PSTTVLSPYISHGCLSAKLFYHKLKEV 516
+ LS + +G + + F+ KL+E+
Sbjct: 377 SIRSKLSCFCQNGMVGEEEFFKKLEEI 403
>UniRef50_A5GIC8 Cluster: FAD binding domain of DNA photolyase;
n=20; Bacteria|Rep: FAD binding domain of DNA photolyase
- Synechococcus sp. (strain WH7803)
Length = 340
Score = 35.5 bits (78), Expect = 1.5
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +1
Query: 418 SPNSIEPSTTVLSPYISHGCLSA----KLFYHKLKEVENGRQHTLPPVSLMGQLMWREFY 585
S N ++ + T LSP+I HG L+ ++ + +L++ GR L+ +L WR+F+
Sbjct: 101 SRNHLKGAVTRLSPWIRHGVLTLAEIREVVFAQLRDRGQGRDDG---GKLINELGWRDFW 157
Query: 586 YTAGTGVA-SFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+ + S + P + + EG+TG +D L GW+H+
Sbjct: 158 QRMWSDLGDSIHESQEELKTGHDPASYSRELPDDVREGRTGLACMDGFRDDLVSSGWLHN 217
>UniRef50_Q8FRW1 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Corynebacterium|Rep: Deoxyribodipyrimidine photolyase -
Corynebacterium efficiens
Length = 492
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 658 TKNDAF---LKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
T +D F L AW G+TG P VDA MR+L G +H+
Sbjct: 347 TSSDEFHVALAAWRAGRTGIPLVDAGMRELWATGSMHN 384
>UniRef50_A7B5Z5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 284
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = +1
Query: 325 KYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHK 504
KY + +ALK++N + K E+ C + +++ S L P+ G +S ++
Sbjct: 14 KYRQTKRKALKKINFQVKKGEFFCIIGANGAGKSTLCNSLVGLIPHYFVGKMSGEVLVSG 73
Query: 505 LKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGN 633
+ ++ + L+ Q + + YTAGT +GN
Sbjct: 74 ARVSDSSISDLSAQIGLVFQNPFNQLSYTAGTVAEELAYGLGN 116
>UniRef50_Q4P1N8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1292
Score = 34.7 bits (76), Expect = 2.6
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 428 LFGDEFGFSNLQTHSFLDMYKFKRLRASVSPP*YFTGANVSSSICNSFKLGIL 270
LF DE + Q H M K KRL +SV+ P YF A + S+ SFK ++
Sbjct: 539 LFFDECHVAITQVHFRPVMDKIKRLMSSVAMPLYFLTATLPPSMVTSFKESLM 591
>UniRef50_UPI00015C60C8 Cluster: hypothetical protein CKO_03947;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_03947 - Citrobacter koseri ATCC BAA-895
Length = 317
Score = 34.3 bits (75), Expect = 3.4
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Frame = +1
Query: 25 EFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSL---VKSIN 195
+F+ QD Y+ + E G+++NK + N+ P+T QK+++ V+
Sbjct: 159 KFMSQDMYVSESGEILGLYVNKITLEQLESF-----SNDSENPITLQKYVNKKFEVRYTV 213
Query: 196 VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK 327
+++ + S H + Y IPN +ID T K
Sbjct: 214 IEDKHFACAIDSQHSNKAKVDWRRYDIPNTPHWKIDAPTAVKEK 257
>UniRef50_Q5ZW53 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 399
Score = 34.3 bits (75), Expect = 3.4
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Frame = +1
Query: 31 VQQDEYIEDIAEKKGVFINKRV-QHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEP 207
++ ++ + I KG FI +H +D+H R+ N + + + + + + P
Sbjct: 64 MEDGDWPDSIDTSKGQFIYYGDNKHPGHDIHDTPRQGNATLKMLFDSTHNEKDARRIVPP 123
Query: 208 IEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALKR-----LNLY 372
I I + +Q + ++P L ++ +A K G+ R LN+
Sbjct: 124 IFIFVKYPTASSSRSVQFKGVAVPGYPGLSATDDLIAVWKTTNGQRFQNYRAIFTILNIP 183
Query: 373 MSKKEWVCKFEKPNSSPNSIEP 438
M ++W+ P NS+ P
Sbjct: 184 MVSRKWINSLFDPFGQDNSLNP 205
>UniRef50_Q5BW19 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 107
Score = 34.3 bits (75), Expect = 3.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 7 ADDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVY 111
ADD+ EFV+ D +I E KG+ IN+ + + VY
Sbjct: 70 ADDVQLEFVRIDPFIRKNMEHKGMIINQVIYYVVY 104
>UniRef50_A6GV05 Cluster: Probable deoxyribodipyrimidine photolyase;
n=1; Limnobacter sp. MED105|Rep: Probable
deoxyribodipyrimidine photolyase - Limnobacter sp.
MED105
Length = 426
Score = 33.9 bits (74), Expect = 4.5
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +1
Query: 424 NSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTG 603
N ++ + T LSP+I+HG LS + L E + L+ + WREF+ A
Sbjct: 33 NFLDGAVTGLSPWITHGYLSVREAAQLLME----KYRLSFEDKLIFEFAWREFFKHA--- 85
Query: 604 VASFDKMVGNAICIQI---PWT--KNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
+GN I + W+ N + EG+TG +DA + L + G++H+
Sbjct: 86 ----HAELGNGILSDVRRPVWSGKYNQQLPEDIREGRTGVEAIDAGVALLYETGYLHN 139
>UniRef50_A1IU21 Cluster: Deoxyribodopyrimidine photolyase; n=3;
Neisseria|Rep: Deoxyribodopyrimidine photolyase -
Neisseria meningitidis serogroup A
Length = 433
Score = 33.9 bits (74), Expect = 4.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 676 LKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
L W +G+TG P +DA MR L + G +H
Sbjct: 299 LTLWQQGRTGIPIIDAAMRCLHKTGSLH 326
>UniRef50_Q4VPF3 Cluster: Phantastica transcription factor b; n=1;
Lotus japonicus|Rep: Phantastica transcription factor b
- Lotus japonicus
Length = 341
Score = 33.9 bits (74), Expect = 4.5
Identities = 27/113 (23%), Positives = 43/113 (38%)
Frame = +1
Query: 121 KVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQI 300
K+ E G K+ + K +E IEI+ ++S PI + + E +
Sbjct: 83 KIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVS----PISDTKYEHMLEGFAEKLV 138
Query: 301 DEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 459
E TL EA N W+ ++ ++ P+SI T LSP
Sbjct: 139 KEHTLPSFAMAASSNEAFLHTNSSAMLPSWLSNYDSTSTPPSSIS-VTLSLSP 190
>UniRef50_A0CC18 Cluster: Chromosome undetermined scaffold_166,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_166,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 33.9 bits (74), Expect = 4.5
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 64 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCK 243
+ KG + +V V D +KV +N G + +K + IN + I+I V+ + K
Sbjct: 577 KSKGKSLGTKVIILVEDQNKVEDQNRGYSIMISRKSVRFGTKINSQNKIQIGTVIVTSVK 636
Query: 244 PI-DIQSENYSIPNLKELQIDEETLA 318
P+ + Q+ + P K +++ + ++
Sbjct: 637 PVSNFQNNDVVTPQFKTIELQTDMIS 662
>UniRef50_Q7SI68 Cluster: Putative cryptochrome DASH, mitochondrial
precursor; n=3; Sordariomycetes|Rep: Putative
cryptochrome DASH, mitochondrial precursor - Neurospora
crassa
Length = 745
Score = 33.9 bits (74), Expect = 4.5
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 LKEL-QIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS-TTVLS 456
LK+L E+ + + GGET A KR++ ++ + ++ +S + P +T LS
Sbjct: 248 LKDLPDFPEKAESSHPFRGGETSAHKRID-HLVLSGGMKSYK--DSRNGLLGPDFSTKLS 304
Query: 457 PYISHGCLSAKLFYHKLKEVENG 525
Y++ GC++A+ +H L E+G
Sbjct: 305 AYLAQGCVTARQIHHALVAYEDG 327
>UniRef50_Q132Y4 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisB5|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisB5)
Length = 481
Score = 33.5 bits (73), Expect = 5.9
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -2
Query: 471 MTNIWTEYCCAWFNTIWR*IW--FFKF 397
MT + +C +WFN +WR +W FF+F
Sbjct: 390 MTKLRRRFCKSWFNHVWRPLWQAFFEF 416
>UniRef50_Q7RF74 Cluster: Streptococcus pyogenes AMV156, putative;
n=5; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
AMV156, putative - Plasmodium yoelii yoelii
Length = 1319
Score = 33.5 bits (73), Expect = 5.9
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 326 NIMVVKQKLLNV*IYTCLKKNGFVNLKNQIHLQIVLN--QAQQYSVHILVMVAYQQNYFI 499
NI + K +N+ T K NGF+ LKN+ IVLN Y +++ + Y+ I
Sbjct: 1077 NIYIYKDICINIIKITKKKINGFLFLKNRNKNNIVLNIINIFNYILYLFYKIIYKNRIKI 1136
Query: 500 INSKRW 517
++ K++
Sbjct: 1137 LSQKKY 1142
>UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair endonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1516
Score = 33.5 bits (73), Expect = 5.9
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +1
Query: 10 DDIDPEFVQQDEYIEDIAEKKGVFINKRV-QHTVYDVHKVLRENNGAVPLTYQKFLSLVK 186
++I+ ++ D+ EDI K GV+ N + + + H ++ ++P T++ FL + +
Sbjct: 327 ENINNIYLDDDDEKEDIQNKNGVYNNDDIDEQIIRKKHMARKKYYESIPKTFKGFLCMRR 386
Query: 187 SINV-------KEPIEISNVLSSH----CKPIDIQSENYSIP 279
+++ E +EIS L H + +++ EN S P
Sbjct: 387 PVDIIDISNYNTEMLEISETLKVHENKFKQHLNVLDENNSTP 428
>UniRef50_A5UV21 Cluster: Hydantoinase B/oxoprolinase; n=2;
Roseiflexus|Rep: Hydantoinase B/oxoprolinase -
Roseiflexus sp. RS-1
Length = 736
Score = 33.1 bits (72), Expect = 7.8
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 PADDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVH-KVLRENNGAVPLTYQKFLSL 180
P D DPE Q ++E + E+ I+ H YD++ VLR NG + + +++
Sbjct: 572 PVSDEDPENSQMVAHVEGVLERDKRTIHLPDPHAEYDLYLSVLRGGNGLGDVLERDPMAV 631
Query: 181 VKSIN 195
V+ +N
Sbjct: 632 VRDLN 636
>UniRef50_Q4U9S5 Cluster: Phosphatidylinositol 4-kinase, putative;
n=2; Theileria|Rep: Phosphatidylinositol 4-kinase,
putative - Theileria annulata
Length = 1194
Score = 33.1 bits (72), Expect = 7.8
Identities = 23/97 (23%), Positives = 47/97 (48%)
Frame = +2
Query: 257 NPKTIVYPI*RNYKLMKKH*HL*NIMVVKQKLLNV*IYTCLKKNGFVNLKNQIHLQIVLN 436
N K ++ + +Y ++ H N+++ KLL C +K+ + LK ++ L N
Sbjct: 1104 NFKRFIHLLLNSYMALRTHS---NLIITLVKLLQYSNIPCFRKSTLMKLKRRLRLNDSPN 1160
Query: 437 QAQQYSVHILVMVAYQQNYFIINSKRWKMVDNTPCHQ 547
+A++Y + ++ Y+ +NSK K+ D +Q
Sbjct: 1161 EAKEYIM--------RKIYYALNSKTTKLYDYVQSYQ 1189
>UniRef50_A7RQH2 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 371
Score = 33.1 bits (72), Expect = 7.8
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Frame = -2
Query: 405 FKFTNPFFFRHV*IQTFKSFCFTTMIFHRC*CFFI---------NL*FLQIGYTIVFGLY 253
F + + FF+ ++ F FC IF+ C FFI +L +L + YT + LY
Sbjct: 145 FLYLHGFFYTYMDFVYFHGFCILAWIFYTCRDFFILAWIFYTCMDLVYLYVFYTCMVFLY 204
Query: 252 INWLAV-A**DIRYFYWFLYINALY**KKLLICEWYSS-----IVLSQNFMYIINCMLYS 91
++ + A Y+F+ LY I W+ S +L+ F+Y+ + +
Sbjct: 205 LHGFCILAWIFYTCMYFFILAWILYICMDFFILAWFFSYLHGFCILAWIFLYLHGFFILA 264
Query: 90 LVNEYTFLLSNVFNVF 43
YT ++ + F
Sbjct: 265 WFFFYTCMVFFILACF 280
>UniRef50_A2GIK0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 250
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 136 NNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQI 300
+N AVPL+ + +SIN P E S++ H PI+ Q+ Y+ P L QI
Sbjct: 178 SNAAVPLSSKSVAMSDRSINDLSPSEASHL--KHKDPIEYQNIQYNTPYLTTAQI 230
>UniRef50_A2DFS8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 859
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 22 PEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQ-KFLSLVKSINV 198
PE++ +Y+E +A+KK ++ +Q ++V + N P+ Y+ KF SL+KS+ +
Sbjct: 457 PEYLALTQYVEFVAKKK----SRPIQQDCFNV-IAIHATNTESPIEYEPKFSSLLKSLTM 511
Query: 199 KEPI 210
K I
Sbjct: 512 KGAI 515
>UniRef50_A7TPZ6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 528
Score = 33.1 bits (72), Expect = 7.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 340 ETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVE 519
ET R N + +KK+W ++ + SS SI S LS ISH ++ K L
Sbjct: 296 ETTEEFRKNYFEAKKKWEAEWLRHKSSQESISRSRVSLSRSISHNNMNKKSSSSLLNSEG 355
Query: 520 NG 525
NG
Sbjct: 356 NG 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.134 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,969,839
Number of Sequences: 1657284
Number of extensions: 16762699
Number of successful extensions: 44968
Number of sequences better than 10.0: 211
Number of HSP's better than 10.0 without gapping: 42744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44813
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -