Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H22
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 32 0.10
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 29 0.73
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 27 3.0
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 27 3.0
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.9
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 26 6.8
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 25 9.0
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 25 9.0
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 25 9.0
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 31.9 bits (69), Expect = 0.10
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 295 QIDEETLAPVKYHGGETEALKRLNLYMSK-KEWV--CKFEKPNSSPNSIEPSTTVLSPYI 465
QI E+ L KY +T+ + +SK +W+ C+ KP SS S+ PS+++
Sbjct: 318 QILEKGLWVSKYAPSKTQDCCAFSQCLSKIADWLRSCRLTKPESS--SVPPSSSISRSST 375
Query: 466 SHGCLSAKLFYHKLKE 513
H C S+K L E
Sbjct: 376 IHSCTSSKRNEDSLSE 391
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 29.1 bits (62), Expect = 0.73
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 403 EKPNSSPNSIEPSTTVLSPYISHG 474
+K + PNS++PS ++ SP +S G
Sbjct: 46 QKQQACPNSVDPSASITSPSLSSG 69
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 286 KELQIDEETLA-PVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS 441
KEL I T+ +KY G E + NL+ + + + + +P I PS
Sbjct: 413 KELLITSPTVPYRIKYKNGREEVISNPNLFPTNHQGISELLEPTVDATIITPS 465
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL--SLVK 186
D EF+ + + + D +K+ + N + + ++++E NG V Q L +++
Sbjct: 298 DASEEFIGKLKGVTDPEKKRKIIGNTFIHVFEREAERIVKETNGKVEYLLQGTLYPDVIE 357
Query: 187 SINVKEP 207
SI+ K P
Sbjct: 358 SISFKGP 364
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -1
Query: 499 DKIVLLISNHD*YMD*VLLCLVQYYLEMNLVFQIY--KPIL 383
D LL +N + +MD +L+C+V++ L + F Y +P+L
Sbjct: 1466 DLFHLLPNNANRFMDELLICVVEFSLRLQRTFPNYFSEPLL 1506
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 79 FINKRVQHTVYDVHKVLREN 138
FIN+R T+ D+ K LRE+
Sbjct: 598 FINRRALKTILDIRKQLREH 617
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 714 KWVTSFTFCPGF*EGVIFCPRYLNANSITNHFVKTGYTSS 595
KW+ F F GV R NA+++T ++T YT+S
Sbjct: 46 KWMKRFVFVGAAGIGVYAWDRVYNAHALTRS-IRTVYTAS 84
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 340 ETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVL---SPYISHGCLSAKLFYHKLK 510
ET + + L LY+ + +++ P SS +PS L + IS + L+++ +
Sbjct: 359 ETASNEELLLYLLQLVQALRYDNPISSDERFQPSPLALFLVNRAISSPSIGNDLYWYLVV 418
Query: 511 EVEN 522
E+E+
Sbjct: 419 EIED 422
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 636 SITNHFVKTGYTSSCCIIKFSPH*LSHQRYWWQGV 532
+ITN F+KT C I + SP + RY+ +GV
Sbjct: 190 AITNSFLKTYNLRLCVITRHSPD-YAGTRYFTRGV 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,404,908
Number of Sequences: 5004
Number of extensions: 78494
Number of successful extensions: 233
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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