Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H22
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0783 + 5835517-5835861,5835989-5836060,5836140-5836220,583... 217 8e-57
04_04_0072 + 22524974-22525310,22526334-22526552,22526826-225275... 61 1e-09
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 60 3e-09
02_05_0008 + 24934917-24935229,24936387-24936608,24936876-249375... 51 1e-06
03_02_0962 + 12766575-12766745,12768001-12768230,12768341-127684... 42 5e-04
06_03_0568 + 22351552-22351679,22352176-22352227,22353044-223531... 32 0.58
12_02_0503 - 19756561-19757991,19758606-19759967 31 0.77
05_01_0082 - 546134-546552,546755-547102,547192-547327,547404-54... 29 3.1
03_02_0531 - 9240635-9240957,9241742-9241865,9241961-9242103,924... 29 3.1
01_01_0796 + 6190931-6192745 29 4.1
10_07_0135 + 13308839-13308899,13310146-13310495,13310574-133107... 29 5.4
10_03_0028 + 7184825-7184837,7185449-7185771,7186052-7186069 29 5.4
01_06_0295 + 28276505-28276576,28276682-28276888,28277492-282777... 29 5.4
07_03_1735 + 29126170-29126227,29126368-29126711,29126790-291269... 28 7.1
09_02_0450 + 9468495-9468528,9468947-9469062,9470031-9470858,947... 28 9.4
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 9.4
03_01_0497 - 3749706-3750160,3750688-3750811,3750904-3751040,375... 28 9.4
>02_01_0783 +
5835517-5835861,5835989-5836060,5836140-5836220,
5836293-5836490,5836576-5836647,5836803-5836889,
5836986-5837084,5837191-5837274,5837351-5837437,
5837578-5837649,5837912-5838025,5838127-5838214,
5838293-5838388,5838507-5838694
Length = 560
Score = 217 bits (530), Expect = 8e-57
Identities = 110/267 (41%), Positives = 165/267 (61%), Gaps = 16/267 (5%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRE---------NNGAVPLTYQ 165
D +P + +D+ + D A G+ + V HT++D +++ + N G P+TYQ
Sbjct: 126 DTEPYALARDKKVMDFAAASGIDVFSPVSHTLFDPAEIIEKFLFSFGKWKNGGRPPMTYQ 185
Query: 166 KFLSLVKSINVKEPIEISNVLSSHCKPIDIQSEN--YSIPNLKEL---QIDEETLAPVKY 330
F+++ EP E S P+ E +P ++EL I +E L+ +
Sbjct: 186 SFVAIAG-----EPPEPIMEEYSELPPVGDTGEYELLPVPRVEELGYGDISQEDLS--LF 238
Query: 331 HGGETEALKRLNLYMSKKEWVCKFEKPNSSPNS-IEPSTTVLSPYISHGCLSAKLFYHKL 507
GGETEALKR+ + KEWV KFEKP P++ ++P+TTVLSPY+ GCLS++ FYH +
Sbjct: 239 RGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLSPYLKFGCLSSRYFYHCI 298
Query: 508 KEV-ENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKA 684
+++ + ++HT PPVSL GQL+WR+F+YT G +FD+M GN IC QIPWT+N+ A
Sbjct: 299 QDIYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGNKICKQIPWTENEELFPA 358
Query: 685 WAEGKTGYPFVDAIMRQLKQEGWIHHL 765
W +G+TGYP++DAIM QL++ GW+HHL
Sbjct: 359 WRDGRTGYPWIDAIMIQLRKWGWMHHL 385
>04_04_0072 +
22524974-22525310,22526334-22526552,22526826-22527532,
22527664-22528482
Length = 693
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYH--KLKEV----ENGRQHTLPPVSLMGQLMWREFY-YTAG 597
ST++LSPY+ G LS + +H ++K++ E R + + RE+ Y +
Sbjct: 247 STSLLSPYLHFGELSVRKVFHLVRMKQLVWSNEGNRAAEESCTLFLRSIGLREYSRYLSF 306
Query: 598 TGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
S +K + + PW N+ + K W +G+TGYP VDA MR+L GW+H
Sbjct: 307 NHPCSHEKPLLAHLRF-FPWVINECYFKIWRQGRTGYPLVDAGMRELWATGWLH 359
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYH--KLKEV--ENGRQHTLPP--VSLMGQLMWREFY-YTAG 597
ST++LSPY+ G LS + +H ++K++ N H V + + RE+ Y
Sbjct: 264 STSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGDESCVLFLRSIGLREYSRYLTF 323
Query: 598 TGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIH 759
S +K + + PW ++ + K W +G+TGYP VDA MR+L GW+H
Sbjct: 324 NHPCSLEKPLLAHLRF-FPWVVDEVYFKVWRQGRTGYPLVDAGMRELWATGWLH 376
>02_05_0008 +
24934917-24935229,24936387-24936608,24936876-24937591,
24937646-24937728,24938448-24938514,24938833-24939228,
24939276-24939318,24939380-24939474,24940287-24940314,
24940636-24940754
Length = 693
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = +1
Query: 439 STTVLSPYISHGCLSAKLFYH-----KLKEVENGRQHTLPPVSL-MGQLMWREF--YYTA 594
+T++LSPY+ G +S + Y ++K G + M + RE+ Y
Sbjct: 243 TTSLLSPYLHFGEVSVRKVYQLVRMQQIKWENEGTSEAEESIHFFMRSIGLREYSRYLCF 302
Query: 595 GTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHH 762
++GN PW ++ K+W +G TGYP VDA MR+L GW H+
Sbjct: 303 NFPFTHEKSLLGNLK--HYPWKVDEERFKSWRQGMTGYPLVDAGMRELWATGWTHN 356
>03_02_0962 +
12766575-12766745,12768001-12768230,12768341-12768439,
12768687-12768774
Length = 195
Score = 41.9 bits (94), Expect = 5e-04
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Frame = +1
Query: 148 VPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVK 327
+P Y F VK ++V++ ++ + C P+ E IP L EL + T P
Sbjct: 1 MPSNYGGFREAVKGLDVRKVLDAPEEVK--CVPMKNVLEPGEIPTLAELGL---TAPPAM 55
Query: 328 YHG-----------GETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPS--TTVLSPYIS 468
HG GE EAL+RL + S+ +S+ +SI + + +SP+++
Sbjct: 56 AHGSKAAVGSTLIGGEAEALERLKKFASECCMQPNKGDKDSTRDSIYGANFSCKISPWLA 115
Query: 469 HGCLSAKLFYHKLKE 513
GCLS + Y +LK+
Sbjct: 116 TGCLSPRFMYEELKK 130
>06_03_0568 +
22351552-22351679,22352176-22352227,22353044-22353117,
22353233-22353322,22353833-22353976,22354885-22354973,
22355539-22355612,22357233-22357317,22357677-22357952,
22358392-22358420
Length = 346
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = -1
Query: 310 FLHQFVIPSNWVYYSFRIVYQLACSGLIRH*IFLLVPLH*CSLLMKETFDM*VVQLHCSL 131
+++ F I N++ + IV + CS ++ I+ + + ++L KE+F+M +V + C L
Sbjct: 173 YINVFAISVNYILWFLEIVPSMGCSQGVKLDIYCHLDML-VNMLWKESFEMPIVDVSCRL 231
Query: 130 S 128
+
Sbjct: 232 N 232
>12_02_0503 - 19756561-19757991,19758606-19759967
Length = 930
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +1
Query: 4 PADDIDPEFVQQDEYIEDI---AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL 174
P D+ Q+ ++E I +++ N + V+ + ++E A L +FL
Sbjct: 30 PDGDLCKRLQQKLPFVEAILYAVDRQQTLSNPSLSEVVWQLRDAIQEAEDA--LDTLEFL 87
Query: 175 SLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKE 291
L S N + + +S++LSS + + + + NLK+
Sbjct: 88 DLKSSANNRSKVSLSSLLSSISRKFHVADSSRATENLKD 126
>05_01_0082 -
546134-546552,546755-547102,547192-547327,547404-547702,
548434-548500
Length = 422
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 298 IDEETLAPVKYHGGETEALKRLNL--YMSKKEWVCK 399
IDE+TLAP K G A+K+LN + +EW+ +
Sbjct: 89 IDEKTLAPTKPGTGMVIAVKKLNQEGHQGHREWLAE 124
>03_02_0531 -
9240635-9240957,9241742-9241865,9241961-9242103,
9242205-9242340,9242468-9242796,9243236-9243305
Length = 374
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 298 IDEETLAPVKYHGGETEALKRLNL--YMSKKEWVCK 399
IDE TL PVK G A+K+L L + +EW+ +
Sbjct: 100 IDERTLTPVKPGTGMIVAVKKLKLDSFQGHREWLAE 135
>01_01_0796 + 6190931-6192745
Length = 604
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 388 WVCK-FEKPNSSPNSIEPSTTVLSPY-ISHGCLSAKLFYHKLKEVENGRQHTLPPVSL 555
W+ + F P+ +P P T +L P H L A LF L + H LPP L
Sbjct: 419 WIQEPFLMPDQAPVHAPPPTPLLMPVGADHFPLEAPLFQESLIMADQKSVHALPPPPL 476
>10_07_0135 +
13308839-13308899,13310146-13310495,13310574-13310709,
13310806-13310942,13311041-13311164,13313393-13313871
Length = 428
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 298 IDEETLAPVKYHGGETEALKRLNL--YMSKKEWVCKFE 405
IDE+TLAP + G A+K+L + KEW+ + +
Sbjct: 104 IDEQTLAPARPGSGMVVAVKKLKPEGFQGHKEWLTEVD 141
>10_03_0028 + 7184825-7184837,7185449-7185771,7186052-7186069
Length = 117
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 361 LNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENG---RQ 531
+ +Y +K E C+ E PN+ NS+ +T + H L ++L H +EN +
Sbjct: 1 MQIYGAKVEVACETEGPNTQANSVFTATDEFGNFTFH--LPSRL--HATPSLENACVVKV 56
Query: 532 HTLPPVSLMG 561
LPP S G
Sbjct: 57 LQLPPDSACG 66
>01_06_0295 +
28276505-28276576,28276682-28276888,28277492-28277740,
28277928-28278080,28278158-28278313,28278411-28278570,
28278664-28278815,28278906-28278993,28279111-28279223,
28279271-28279345,28279435-28279669,28279760-28280148
Length = 682
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 4 PADDIDPEFVQQDEYIEDIAE-KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSL 180
P D D + DE +D+ +K + + TVY+VH L E G+ L+ L
Sbjct: 151 PVDQSDLSLRKLDELTKDLESLQKEKVLGIDFKQTVYEVHPSLDEAEGSKNLSNTTIERL 210
Query: 181 VKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETL 315
+ N ++I + K D S + NL + ++E+ +
Sbjct: 211 AAAANRLREMKIQRMQ----KLQDFASSMLELWNLMDTPLEEQQM 251
>07_03_1735 +
29126170-29126227,29126368-29126711,29126790-29126928,
29127028-29127668
Length = 393
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 298 IDEETLAPVKYHGGETEALKRL--NLYMSKKEWVCK 399
IDE TLAP K G+ A+K+L + KEW+ +
Sbjct: 101 IDELTLAPTKPGVGKMVAIKKLKKESFQGHKEWLAE 136
>09_02_0450 +
9468495-9468528,9468947-9469062,9470031-9470858,
9470955-9471107,9471194-9471604
Length = 513
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 277 PNLKELQIDEETLAPVKYHGGETEALKRLNL-YMSKKEWVCKFEKPNSSPN 426
PNL L I + P+K GE+ +K L + Y S + C E P PN
Sbjct: 266 PNLHSLHIFYQPYHPIKLSFGESSLVKNLRIGYSSVLDHACA-ELPYIFPN 315
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +1
Query: 160 YQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGG 339
+ + L +I +EI N+ S+ D+ + + NL+EL + + + + G
Sbjct: 275 FNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFG 334
Query: 340 ETEALKRLNL 369
+ L++LNL
Sbjct: 335 RLDKLEKLNL 344
>03_01_0497 -
3749706-3750160,3750688-3750811,3750904-3751040,
3751143-3751278,3751366-3751626,3752334-3752398,
3752473-3752530
Length = 411
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 298 IDEETLAPVKYHGGETEALKRLNL--YMSKKEWV 393
IDE TLAP K G A+K+L + KEW+
Sbjct: 95 IDEHTLAPSKPGSGMVVAVKKLKPEGFQGHKEWL 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,260,826
Number of Sequences: 37544
Number of extensions: 427954
Number of successful extensions: 1103
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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