Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H22
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...   232   8e-63
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...   127   4e-31
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.9  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score =  232 bits (568), Expect = 8e-63
 Identities = 104/256 (40%), Positives = 160/256 (62%), Gaps = 4/256 (1%)
 Frame = +1

Query: 10  DDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS 189
           +D +P    +D  I ++ ++ G+ +     HT+Y++ +++ +N G  PLTY +F +++ S
Sbjct: 101 EDPEPFGRVRDHNISEMCKELGIEVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIAS 160

Query: 190 INVKEPIEISNVL----SSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALK 357
           ++     E +  L    +++    D   + Y +P L+EL  + E L P  + GGETEAL 
Sbjct: 161 MDAPPQPEAAITLDVIGNANTPQYDDHDDKYGVPTLEELGFETEALRPPVWIGGETEALA 220

Query: 358 RLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHT 537
           RL  ++ +K WV  F +P  +P S+  S T LSPY+  GCLS +LFY++L ++    +  
Sbjct: 221 RLERHLERKAWVASFGRPKMTPQSLLASQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKA 280

Query: 538 LPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFV 717
            PP+SL GQL+WREF+Y A T   +FDKM GN IC+QIPW +N   L  WA G+TG+P++
Sbjct: 281 CPPLSLHGQLLWREFFYCAATKNPTFDKMAGNPICVQIPWDRNAEALAKWASGQTGFPWI 340

Query: 718 DAIMRQLKQEGWIHHL 765
           DAIM QL++EGWIHHL
Sbjct: 341 DAIMTQLREEGWIHHL 356


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score =  127 bits (306), Expect = 4e-31
 Identities = 85/269 (31%), Positives = 137/269 (50%), Gaps = 18/269 (6%)
 Frame = +1

Query: 13  DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
           D +P + ++D+ +  +     V   + V HT+++  +V++ N    PLTYQ FL  V  I
Sbjct: 109 DCEPIWKERDDAVAKLCRTMDVRCVENVSHTLWNPIEVIQTNGDIPPLTYQMFLHTVNII 168

Query: 193 -NVKEPIEISNV--LSSHCKPIDIQSEN---YSIPNLKELQIDEETLAPV---KYHGGET 345
            +   P+   N   +     P  + SE      +P   +  I  +  A +   K+ GGET
Sbjct: 169 GDPPRPVGAPNFEYVEFGRVPALLASELKLCQQMPAPDDFGIHYDGNARIAFQKWIGGET 228

Query: 346 EALKRLNLYMSKKEWVCK---FEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFY---HKL 507
            AL+ L   + ++E   +   +    + P  + P+T+ +S  +  GCLS ++FY   H L
Sbjct: 229 RALEALGARLKQEEEAFREGYYLPTQAKPEILGPATS-MSAALRFGCLSVRMFYWCVHDL 287

Query: 508 -KEVENGRQHTLPPVS-LMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTK-NDAFL 678
             +V++  Q   P    + GQL+WRE++YT       + +M  N IC+ IPW K  D  L
Sbjct: 288 FAKVQSNSQFKYPGGHHITGQLIWREYFYTMSVQNPHYGEMERNPICLNIPWYKPEDDSL 347

Query: 679 KAWAEGKTGYPFVDAIMRQLKQEGWIHHL 765
             W EG+TG+P +DA MRQL  EGW+HH+
Sbjct: 348 TRWKEGRTGFPMIDAAMRQLLAEGWLHHI 376


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +2

Query: 365 IYTCLKKNGFVNLKN 409
           +Y C+K+NGF+++ +
Sbjct: 214 VYRCVKENGFLSISS 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,491
Number of Sequences: 2352
Number of extensions: 19196
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)