Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H22
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF106575-4|AAC78172.2| 548|Caenorhabditis elegans Hypothetical ... 31 1.2
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 29 2.8
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 29 2.8
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 29 2.8
Z81562-6|CAB04554.1| 211|Caenorhabditis elegans Hypothetical pr... 28 6.4
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81142-6|CAB03508.1| 344|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 758 WIQPSCFSCLMIASTNG*PVLPSAQAFKKASFFVQGI*MQIALPTILSKLATPVPAV 588
+I P C +C I S NG + SA+ F + Q M L I K TP+PAV
Sbjct: 308 FIMPLCVACSTIGSANG-VIFTSARLFYSGAREGQ---MPAVLTMINKKTKTPIPAV 360
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 280 NLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 459
+L L +D ++ ++ E +KRL L+ +K ++ + + SP S+E L+P
Sbjct: 398 SLSSLALDHNVISKIEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNP 457
Query: 460 YI 465
++
Sbjct: 458 WV 459
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 280 NLKELQIDEETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSP 459
+L L +D ++ ++ E +KRL L+ +K ++ + + SP S+E L+P
Sbjct: 414 SLSSLALDHNVISKIEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNP 473
Query: 460 YI 465
++
Sbjct: 474 WV 475
>AF106575-4|AAC78172.2| 548|Caenorhabditis elegans Hypothetical
protein K04F1.13 protein.
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 166 KFLSLVKSINVKEPIEISNVLSSHCKPIDIQSENYSI--PNLKELQIDEE-TLAPVKYHG 336
+FLS NVK PI + +P+ + N I N++E ++ EE T + VKY+G
Sbjct: 404 RFLSNSALKNVKFPIMKRPPFQINHEPVIEINGNLEIIFNNVQECKLHEEQTQSRVKYNG 463
Query: 337 GETEALKRLN 366
E +AL+ L+
Sbjct: 464 DECDALEELS 473
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 412 NSSPNSIEP-STTVLSPYISHGCLSAKLFYHKLKEVENGR 528
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 663 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 702
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 412 NSSPNSIEP-STTVLSPYISHGCLSAKLFYHKLKEVENGR 528
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 663 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 702
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 412 NSSPNSIEP-STTVLSPYISHGCLSAKLFYHKLKEVENGR 528
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 663 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 702
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 412 NSSPNSIEP-STTVLSPYISHGCLSAKLFYHKLKEVENGR 528
NS+PN IE S V+ G LSA Y KLKE EN R
Sbjct: 371 NSTPNFIEMISAEVVMGKYPKGLLSAWDSYDKLKESENTR 410
>Z81562-6|CAB04554.1| 211|Caenorhabditis elegans Hypothetical
protein K03D7.9 protein.
Length = 211
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 415 NLVFQIYKPILF*TCINSNV*ELLFHHHDISQVLMFLHQFVIPSNWVYYSFRIVYQL 245
++ F +Y I F + S LF++H + Q+L LH VIP + Y +Y L
Sbjct: 91 DIAFVVYNFIFFIMTLTSG----LFYYH-LYQLLKKLHSDVIPETQILYRVVPIYSL 142
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 13 DIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 192
DID +DE + I N ++ + + V V+++NN P TY ++ +
Sbjct: 299 DIDERIEMRDEKYKTIVNYLDTIKNLQIVNLHFKVQWVIKQNN--TPATYVNDKQIIDEM 356
Query: 193 NVKEPIEISNV 225
N + IS V
Sbjct: 357 NFHKYQNISQV 367
>AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical
protein Y56A3A.9 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 127 LRENNGAVPLTYQ-KFLSLVKSIN-VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQI 300
+ + G +PL+++ K ++ +I+ +K SN L+ K + + P L
Sbjct: 171 IHDEAGILPLSHKIKLMNQQYAISMIKSAGHPSNGLTGRRKLARNTTRSSKPPREPPLDF 230
Query: 301 DEETLAPVKYHGGETEALKRLN 366
++TL K H G T++L++LN
Sbjct: 231 PDKTLDDWKNHPGSTKSLQKLN 252
>Z81142-6|CAB03508.1| 344|Caenorhabditis elegans Hypothetical
protein ZK1037.9 protein.
Length = 344
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 365 IYTCLKKNGFVNLKNQIHLQIVLNQAQQYSVHILVMVAY 481
IY C ++ + L I +IV AQ+ S +++M+A+
Sbjct: 97 IYACYGEDSYSRLAVDIAFEIVKKTAQRASTWLILMIAF 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,420,497
Number of Sequences: 27780
Number of extensions: 424235
Number of successful extensions: 1146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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