Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H22
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.    233   2e-63
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   1.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   1.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   9.5  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score =  233 bits (569), Expect = 2e-63
 Identities = 107/256 (41%), Positives = 164/256 (64%), Gaps = 4/256 (1%)
 Frame = +1

Query: 10  DDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKS 189
           +D +P    +D  I  + ++ G+ + ++V HT+Y + +++  N    PLTY +F ++V S
Sbjct: 118 EDPEPFGRVRDHNISALCKELGISVVQKVSHTLYKLDEIIERNGDKPPLTYHQFQTVVAS 177

Query: 190 INVKEP----IEISNVLSSHCKPIDIQSENYSIPNLKELQIDEETLAPVKYHGGETEALK 357
           ++  EP    +  + V S++    +   ++Y +P L+EL  D E L P  + GGE+EAL 
Sbjct: 178 MDPPEPPVPTVTSACVGSAYTPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALA 237

Query: 358 RLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKEVENGRQHT 537
           RL  ++ +K WV  F +P  +P S+ PS T LSPY+  GCLS +LFY++L ++    +  
Sbjct: 238 RLERHLERKAWVASFGRPKMTPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKA 297

Query: 538 LPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFV 717
           +PP+SL GQL+WREF+Y A T   +FD+M GN IC+QIPW KN   L  WA G+TG+P++
Sbjct: 298 VPPLSLHGQLLWREFFYCAATKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWI 357

Query: 718 DAIMRQLKQEGWIHHL 765
           DAIM QL++EGWIHHL
Sbjct: 358 DAIMTQLREEGWIHHL 373


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 3/188 (1%)
 Frame = +1

Query: 130 RENNGAVPLTYQKFLSLVKSIN--VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQID 303
           RE    VPL  QK++ ++  ++  +   I++  V+ S+   + + ++   +  L  +   
Sbjct: 309 RETGATVPLHMQKYVQMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQ-GLNVLGNIVQG 367

Query: 304 EETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLS 483
                 V+ + G+ + L R  L    +  V    K    P++++  +T L   +      
Sbjct: 368 NGDSVNVQLY-GQLDLLVRKVLGFGYESNV----KYQVVPSALQMWSTSLRDPVFFSIYK 422

Query: 484 AKL-FYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWT 660
             L +YHK K  EN  ++T   ++  G  +         T    F+ M+ N + IQ    
Sbjct: 423 TILDYYHKYK--ENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAK 480

Query: 661 KNDAFLKA 684
             +  +KA
Sbjct: 481 AKNTMIKA 488


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 3/188 (1%)
 Frame = +1

Query: 130 RENNGAVPLTYQKFLSLVKSIN--VKEPIEISNVLSSHCKPIDIQSENYSIPNLKELQID 303
           RE    VPL  QK++ ++  ++  +   I++  V+ S+   + + ++   +  L  +   
Sbjct: 309 RETGATVPLHMQKYVQMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQ-GLNVLGNIVQG 367

Query: 304 EETLAPVKYHGGETEALKRLNLYMSKKEWVCKFEKPNSSPNSIEPSTTVLSPYISHGCLS 483
                 V+ + G+ + L R  L    +  V    K    P++++  +T L   +      
Sbjct: 368 NGDSVNVQLY-GQLDLLVRKVLGFGYESNV----KYQVVPSALQMWSTSLRDPVFFSIYK 422

Query: 484 AKL-FYHKLKEVENGRQHTLPPVSLMGQLMWREFYYTAGTGVASFDKMVGNAICIQIPWT 660
             L +YHK K  EN  ++T   ++  G  +         T    F+ M+ N + IQ    
Sbjct: 423 TILDYYHKYK--ENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAK 480

Query: 661 KNDAFLKA 684
             +  +KA
Sbjct: 481 AKNTMIKA 488


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 410 GFSNLQTHSFLDMYKFKRLRA-SVSPP 333
           G S +Q H + D + ++ LRA ++ PP
Sbjct: 616 GISEIQKHKWFDGFNWEGLRARTLEPP 642


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 553 LMGQLMWREFYYTAGTGVASFDKMVGNA 636
           LMG+  W+++  T  +G  S + +   A
Sbjct: 40  LMGRRRWKQYQDTLYSGTRSSESLTAQA 67


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 409 PNSSPNSIEPSTTVLSPYISHGCLSAKL 492
           P   PN I P    +SP +S  C   +L
Sbjct: 46  PFCGPNVINPFFCDMSPLLSLVCADTRL 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,649
Number of Sequences: 438
Number of extensions: 5218
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)