Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H21
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534...    30   1.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   5.7  
02_01_0158 - 1103461-1104186                                           29   5.7  
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411...    29   5.7  
04_04_0451 - 25323178-25323241,25323614-25323741,25324533-253246...    28   10.0 
02_04_0079 + 19522894-19522905,19523474-19523737                       28   10.0 

>11_01_0658 +
           5342508-5343602,5343697-5343764,5343994-5344042,
           5344217-5344333,5344438-5344506,5344631-5344725,
           5345580-5345658,5346499-5346563,5347368-5347461,
           5347675-5347744,5348363-5349357
          Length = 931

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +3

Query: 399 GGSWPPAPREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSP 578
           GGS      EP+    G   ++STA M RN+ N +++   L A  +    +++  SS+ P
Sbjct: 198 GGSTGGVKLEPQM---GQPDQNSTAQMMRNASNVKIEPPQLQALRSLSAVKMEQQSSD-P 253

Query: 579 ILSTEENQQKPKMIQEPK 632
               ++ QQ+  ++Q  K
Sbjct: 254 SAFLQQQQQQQHLLQLTK 271


>04_03_0018 -
           9434088-9434141,9434211-9434282,9434968-9435062,
           9435445-9435526,9435610-9435660,9435749-9435829,
           9435965-9436006,9436117-9436215,9438130-9438201,
           9438557-9438680,9438850-9439723,9440274-9440456,
           9440941-9442741,9442825-9443049,9443117-9443814,
           9444519-9444591
          Length = 1541

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = +3

Query: 402 GSWPPAPREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPI 581
           GS   A  +P CA+  + +  ST    +      + ++++ + L+P R  ++STS++   
Sbjct: 689 GSSFQANGDPTCANTSTDANESTQLELKRKSFLSLSTSSIFSPLSPRRNLLRSTSTDLSF 748

Query: 582 LS---TEENQ 602
           LS   T+ NQ
Sbjct: 749 LSPLQTKSNQ 758


>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 719 GCGADSKSFGRYFT--RRNRRGIPGGGCYXC 805
           G G   +S+G  +   RR+  G PGGGC+ C
Sbjct: 99  GSGGGGRSYGGSWGGGRRSGGGGPGGGCFKC 129


>01_06_1342 -
           36438869-36439459,36439567-36439627,36440751-36441130,
           36441955-36442761
          Length = 612

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 402 GSWPPAPREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAH-LAPDRRRIKSTSSNSP 578
           GSWPP P         +   +++++   + H+  +  A L+AH LAP   +I + + +  
Sbjct: 96  GSWPPPP---------AFYSYASSSSSYSPHSPTLAQAQLVAHGLAPPLPQIPTQNFSLS 146

Query: 579 ILSTEENQQKPK 614
           + S   N   P+
Sbjct: 147 LSSASSNPPPPQ 158


>04_04_0451 - 25323178-25323241,25323614-25323741,25324533-25324634,
            25325314-25325382,25325489-25325557,25325646-25325720,
            25325805-25325909,25326394-25326492,25326626-25328344,
            25328629-25328931,25329031-25329129,25329733-25329850,
            25329933-25330018,25330091-25330159,25330232-25330306,
            25330675-25330772,25331271-25331432,25332391-25332556,
            25332902-25332970,25333064-25333126,25333221-25333376,
            25334027-25334365
          Length = 1410

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
 Frame = +3

Query: 414  PAPREPECADYGSMSKHSTATMQRNSHN-DRVKSANLIAHLAPDRRRI-KSTSSNSPILS 587
            P P+  + ADYG+ S+   A   + S+   R  S++L A        + +ST  N+P+  
Sbjct: 997  PRPKSYDQADYGTSSEDGYALASKKSYPFGRYSSSSLDAEGGKWMNSVQESTPRNAPMAR 1056

Query: 588  TEENQQKPKMIQEPKTVETGILVDVCSAEQRENVYDSPALGSPRAVAPIPKASVDILQDE 767
            T  +       Q  + ++TG  V +  + + +N   S  + + R+    P+ +   L DE
Sbjct: 1057 TTSDMSIDHTSQSIE-LDTGSEVLLTRSRESKN-NTSSLVETARSWPNYPEKTDAPLDDE 1114

Query: 768  IGVGS 782
              + +
Sbjct: 1115 TAIST 1119


>02_04_0079 + 19522894-19522905,19523474-19523737
          Length = 91

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 297 ILIQNCTMNDENNKMIGNNILINANDQV---DLFHLIGGSWPPAPREPECADYGSMSKHS 467
           + +QNC M  EN ++    +L+N  +Q    +L H +  S  PA   P  A   + SK++
Sbjct: 13  LYLQNCYMLKENERLRKAAVLLNQENQALLSELKHRLARSPSPAAAAPGVA---NDSKNA 69

Query: 468 TATMQRNS 491
            A   R++
Sbjct: 70  AAAAGRHA 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,115,770
Number of Sequences: 37544
Number of extensions: 358401
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)