Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H21
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126413-1|AAI26414.1|  711|Homo sapiens C10orf71 protein protein.     38   0.056
AF307451-1|AAK30049.1|  578|Homo sapiens Cat eye syndrome critic...    30   8.5  
AF097942-1|AAC83816.1|  375|Homo sapiens monocyte antigen CD14 p...    30   8.5  

>BC126413-1|AAI26414.1|  711|Homo sapiens C10orf71 protein protein.
          Length = 711

 Score = 37.5 bits (83), Expect = 0.056
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = +3

Query: 414 PAPREPECADY--GSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILS 587
           PA R P       G   K  +    R+S+    K+ +L+ +L   R+R+KST S+SP+L 
Sbjct: 464 PAERTPSPPGQLNGYQEKEPSECQSRDSYKS--KAPSLLFNLKDVRKRVKSTYSSSPLLK 521

Query: 588 TEENQQKPKMIQEPKTVETGILV 656
             + + + K+  + + V  G+++
Sbjct: 522 VLDEKTRGKVDGKQEPVSNGVIL 544


>AF307451-1|AAK30049.1|  578|Homo sapiens Cat eye syndrome critical
           region candidate gene number 6 protein.
          Length = 578

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 805 TSVATSTRDPTPISSCKISTEAFGIGATA 719
           +S ATS+   TP SSC ++   FG GA A
Sbjct: 115 SSAATSSSTSTPTSSCSMTAADFGGGAAA 143


>AF097942-1|AAC83816.1|  375|Homo sapiens monocyte antigen CD14
           precursor protein.
          Length = 375

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 795 QPPPGIPRRFRLVKYLPKLLESAPQPEVNPKLEN 694
           Q P G+P + R+++     L  APQP+  P+++N
Sbjct: 290 QVPKGLPAKLRVLELSCNRLNRAPQPDELPEVDN 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,144,858
Number of Sequences: 237096
Number of extensions: 2037486
Number of successful extensions: 4518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4514
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)