Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H21
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006833-9|AAF60943.1|  318|Caenorhabditis elegans Saposin-like ...    31   0.73 
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass...    30   2.2  
Z82069-4|CAB04905.1|  290|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z49071-6|CAA88876.2|  292|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z48334-4|CAB61010.2|  426|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z29094-16|CAA82345.2|  184|Caenorhabditis elegans Hypothetical p...    28   6.8  
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF143297-1|AAD33902.1|  426|Caenorhabditis elegans tubby homolog...    28   6.8  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z70212-5|CAA94165.3|  320|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U23511-13|AAC46800.1|  770|Caenorhabditis elegans Hypothetical p...    28   9.0  

>AC006833-9|AAF60943.1|  318|Caenorhabditis elegans Saposin-like
           protein family protein7 protein.
          Length = 318

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 465 STATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEENQQKPKMIQEPK 632
           S   ++R  HNDR+   N++  + P   R K  S N+ + S+ E   + + I E +
Sbjct: 188 SIEQVRREEHNDRIGHKNVLEIIIPPPLRSKYMSRNTIVESSREKVPEKEEIDEKR 243


>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 278 protein.
          Length = 1130

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
 Frame = +3

Query: 396 IGGSWPPAP---REPEC----ADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRI 554
           +GG  PP+P   R P      +    +S+HS A+ + +  N  + S   ++H+A +  R 
Sbjct: 52  VGGPAPPSPVLRRAPSGPISPSPISPVSQHSRASSRHDIDNTSLLSILKLSHVARESSR- 110

Query: 555 KSTSSNSPILSTEENQQKPKMIQEPKTV 638
            ++ +NSP  +  E + K K+    +TV
Sbjct: 111 NTSRNNSPQPAGRETELKRKIQTLEETV 138


>Z82069-4|CAB04905.1|  290|Caenorhabditis elegans Hypothetical
           protein W04A8.5 protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +2

Query: 137 IKIINKKNYEVN*LQFYHEAITPELY*LKIIALCIVLVIIYENKQKCVTLFNWDSNSKL 313
           I  + + N  +  LQF HE I+ +L+   ++  C+  V I+  + + +T+ NW+   K+
Sbjct: 129 ITSVKEINLNITNLQFRHERISSDLF-NWLLENCVQDVHIWVLEPQSITVSNWNVFEKV 186


>Z49071-6|CAA88876.2|  292|Caenorhabditis elegans Hypothetical
           protein T22C8.4 protein.
          Length = 292

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +3

Query: 456 SKHSTATMQRNSHNDRVKSANLIAHLAPDRRRI-KSTSSNSPILSTEENQQKPKMIQEPK 632
           + +ST+T   +   D    +  ++ +AP RRRI KS++S+   +   E+  K K+ +E K
Sbjct: 60  TSNSTSTSFGSDQMDIENHSPKLSGVAPKRRRIDKSSTSSEAKIQRMEDAMKKKLEKEQK 119


>U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical
           protein F56C9.6 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 792 PPPGIPRRFRLVKYLPKLLESAPQPEVNPKLENRRHFRV 676
           PP  +P   R+ +  PK  ++ P+P   PK  N  ++++
Sbjct: 262 PPSIVPSPIRIGQRYPKRPDNMPKPSSEPKHLNHNYYQI 300


>Z48334-4|CAB61010.2|  426|Caenorhabditis elegans Hypothetical
           protein F10B5.4 protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 447 GSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEENQQKPKMIQE 626
           GS+   STA M  NS  D     N +     D   + S S N+P++ T++   +P+M   
Sbjct: 33  GSVRTTSTA-MSMNSMKDYPTFDNSLPFSISDNSSV-SVSMNTPLIPTQDPIAQPRMQSM 90

Query: 627 PK 632
           P+
Sbjct: 91  PR 92


>Z29094-16|CAA82345.2|  184|Caenorhabditis elegans Hypothetical
           protein C07A9.9 protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +3

Query: 432 ECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEENQQ 605
           +C+D+ S+ KH    M R+S  D  KS  L A      R I S +     L++E + +
Sbjct: 87  DCSDHSSLCKHCCYEMIRDSIKD-YKSGPLYARCPQCFRNISSLTRRKRRLTSEGHDE 143


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 146 LF*CMYIFISDNKLISLIKYLLIANIDYYLNKLFQILFAT 27
           LF  + I I  N  I+    L++ N DYY+N +  I+  T
Sbjct: 85  LFAFLLITIFKNIFINSSILLIVTNTDYYINTVHNIIMGT 124


>AF143297-1|AAD33902.1|  426|Caenorhabditis elegans tubby homolog
           protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 447 GSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEENQQKPKMIQE 626
           GS+   STA M  NS  D     N +     D   + S S N+P++ T++   +P+M   
Sbjct: 33  GSVRTTSTA-MSMNSMKDYPTFDNSLPFSISDNSSV-SVSMNTPLIPTQDPIAQPRMQSM 90

Query: 627 PK 632
           P+
Sbjct: 91  PR 92


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
            protein H02F09.3 protein.
          Length = 1275

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = -1

Query: 805  TSVATSTRDPTPISSCKISTEAFGIGATARGEPKAGES*TFSRCSALHTSTKIPVSTVLG 626
            +S  +ST   + +S   +ST +   G+T  GE     S T S  +A  T +   VSTV G
Sbjct: 1062 SSTGSSTSGESTVSGSTVSTVSGSTGSTITGESTVSGS-TESTVTAESTVSGSSVSTVSG 1120

Query: 625  S 623
            +
Sbjct: 1121 N 1121


>AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical
           protein C05C8.2 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 489 SHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEENQQKPK 614
           S ND +K AN  A+L   R++++S ++       +  + KPK
Sbjct: 234 SKNDELKDANWDAYLPNYRKKVQSATTTKEAKKKKAYKMKPK 275


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 420  PREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRR 551
            P E +  D  S+SKH       N+ N  V  A L  H   DR R
Sbjct: 2148 PEENDDVDLSSVSKHCALVRSNNTFNFSVNRA-LHIHFVTDRSR 2190


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 420  PREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRR 551
            P E +  D  S+SKH       N+ N  V  A L  H   DR R
Sbjct: 2148 PEENDDVDLSSVSKHCALVRSNNTFNFSVNRA-LHIHFVTDRSR 2190


>Z70212-5|CAA94165.3|  320|Caenorhabditis elegans Hypothetical
           protein R04D3.7 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +2

Query: 44  ETIYLNNNLC*QSTNI*L--KILIYCH**ICTYIKIINKKNYEVN*LQFYHEAITPELY* 217
           +T+YL N +  Q     +   IL+Y    ICT+I  I K  Y  +  QF+   + P L  
Sbjct: 221 DTLYLQNRIFLQGLTFQIFGHILVYVPIYICTFISFITKTEYTFS--QFF-IFVLPSLTT 277

Query: 218 LKIIALCIVLVIIYENKQKC 277
           +    + +  V  Y  K  C
Sbjct: 278 VVDPVITMYFVTPYRKKLLC 297


>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
            ZC373.4 protein.
          Length = 1211

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = +3

Query: 531  LAPDRRRIKSTSSNSPILSTEENQQKPKMIQEPKTVETGILVDVCSAEQRENVYDSPALG 710
            L+PD     S+S N  IL T+E   K  +   P +V T       S+E+R+ V  +  +G
Sbjct: 1049 LSPDSSSDTSSSKNVRILLTDEQSVKSSVRSHP-SVSTR-----DSSEERKKVRFAGDVG 1102

Query: 711  SPRAVAPIP 737
            +P  + P P
Sbjct: 1103 TPTKLNPPP 1111


>U23511-13|AAC46800.1|  770|Caenorhabditis elegans Hypothetical
           protein C32D5.11 protein.
          Length = 770

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 770 DFVL*NIYRSFWNRRHSPR*TQSWRIVDIFALFSAAHVN 654
           DF   N  RS   RRH P+  +  RI ++  LF+ A+ N
Sbjct: 639 DFAHLNRTRSILERRHFPQPPREQRIEEVEQLFNRAYQN 677


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,239,764
Number of Sequences: 27780
Number of extensions: 345552
Number of successful extensions: 987
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)