Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H18
         (517 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0525 - 19044978-19045508                                         27   8.9  
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434...    27   8.9  
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231...    27   8.9  

>07_03_0525 - 19044978-19045508
          Length = 176

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 163 TSAGEEATSNQTAPPSKVDLRNMIVVPP 246
           T+A   A +   APPS+  +R  +V+PP
Sbjct: 42  TTADSTAAAAAAAPPSRERVRRRVVLPP 69


>05_05_0016 -
           21542300-21542886,21542956-21543286,21543310-21543419,
           21543526-21544069,21544190-21544345
          Length = 575

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 178 EATSNQTAPPSKVDLRNMIVVPPNCPAGYKMGP 276
           EATS  T PP +VDL  +I     CP    +GP
Sbjct: 220 EATS--TLPPFEVDLNTVIPADIVCPCQTYLGP 250


>01_06_0359 +
           28722524-28722613,28722794-28722863,28723062-28723159,
           28724029-28724167,28724243-28724370,28724500-28724592,
           28724707-28724757,28725405-28725470,28725568-28725633,
           28725900-28725977,28726248-28726427,28726502-28726577,
           28726660-28726823,28727569-28727931
          Length = 553

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 181 ATSNQTAPPSKVDLRNMIVVPPNCPAGYKMGPDG 282
           A SNQ APP  V + +M   P   P   +  P G
Sbjct: 476 AMSNQVAPPPSVQMASMTQQPQQMPMMMQPNPFG 509


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,302,036
Number of Sequences: 37544
Number of extensions: 178926
Number of successful extensions: 366
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)