Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H17
(827 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 184 1e-47
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 180 2e-46
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 166 3e-42
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 165 7e-42
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 9e-42
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 137 2e-33
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 95 1e-20
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 28 1.9
SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual 28 1.9
SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomy... 27 3.2
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 7.5
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 26 7.5
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 26 7.5
SPBC543.10 |||GET complex subunit |Schizosaccharomyces pombe|chr... 25 9.9
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 184 bits (448), Expect = 1e-47
Identities = 96/233 (41%), Positives = 133/233 (57%)
Frame = +3
Query: 129 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMK 308
+V+GIDFGN IAVA+ I+ I N+ S R TPS V++ +++R LG AAK+ +N +
Sbjct: 6 NVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFR 65
Query: 309 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 488
NTV KRL GR + DP ++ +F DG +G +V YLNE+ F+ Q+ A
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 489 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTATALTY 668
TK+K +A L ++D VIS+P++FT+ +R RLMN+ A ALTY
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTY 185
Query: 669 GIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGGR 827
GI K DLP E PR V VDFGHS+ VS F++G+ I +T D G R
Sbjct: 186 GITKTDLP-EPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSR 237
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 180 bits (439), Expect = 2e-46
Identities = 94/230 (40%), Positives = 134/230 (58%)
Frame = +3
Query: 135 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 314
IGID G +AV + +E I ND R TPS VAF++ R++G AAKNQ N +NT
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNT 68
Query: 315 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 494
VF KRL+GR++ DP QK++KH+PFKV ++G I VNYL E FT ++I+AM+LT
Sbjct: 69 VFDAKRLIGRRYEDPETQKDIKHWPFKVID-NNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 495 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTATALTYGI 674
K+K+++ L ++ VI+VP+YF++++R R++NE TA A+ YG
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYG- 186
Query: 675 YKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGG 824
L +KP+NV+ D G + VS G +LATA D GG
Sbjct: 187 ----LDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGG 232
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 166 bits (404), Expect = 3e-42
Identities = 89/230 (38%), Positives = 127/230 (55%)
Frame = +3
Query: 135 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 314
IGID G + +E IAND R TPS VAF+ R++G AAKNQ+ N NT
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNT 64
Query: 315 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 494
+F KRL+GRKF DP VQ ++KH+PFKV + DG ++V Y E FTPE+I++M+L
Sbjct: 65 IFDAKRLIGRKFDDPEVQSDMKHWPFKVISK-DGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 495 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTATALTYGI 674
K+++ A L ++ D V++VP+YF +++R R++NE TA A+ YG
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG- 182
Query: 675 YKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGG 824
L + + NV+ D G + VS +G + ATA D GG
Sbjct: 183 ----LDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGG 228
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 165 bits (401), Expect = 7e-42
Identities = 88/232 (37%), Positives = 131/232 (56%)
Frame = +3
Query: 129 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMK 308
+VIGID G +AV K G +E IAND R TPS VAF++ R++G AAKNQ +N +
Sbjct: 36 TVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPE 95
Query: 309 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 488
NT+F KRL+GRKF + + K++K FPF + + + + VN + FTPE+I+AM+
Sbjct: 96 NTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPL-VEVNVGGKKKKFTPEEISAMI 154
Query: 489 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTATALTY 668
L+K+K A L + V++VP+YF +A+R R++NE TA A+ Y
Sbjct: 155 LSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAY 214
Query: 669 GIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGG 824
G+ K D +++V D G + VS + + G +LAT+ D GG
Sbjct: 215 GLDKTD------TEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGG 260
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (400), Expect = 9e-42
Identities = 88/230 (38%), Positives = 129/230 (56%)
Frame = +3
Query: 135 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 314
IGID G + +E IAND R TPS VAF+ R++G AAKNQ+ N NT
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNT 64
Query: 315 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 494
+F KRL+GR+F+DP VQ ++KH+PFKV ++ DG I+V + E FTPE+I++M+L
Sbjct: 65 IFDAKRLIGRRFNDPEVQSDMKHWPFKVIEK-DGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 495 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTATALTYGI 674
K+++ A L ++ D V++VP+YF +++R R++NE TA A+ YG
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG- 182
Query: 675 YKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGG 824
L + + NV+ D G + VS +G + ATA D GG
Sbjct: 183 ----LDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGG 228
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 137 bits (331), Expect = 2e-33
Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Frame = +3
Query: 132 VIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNMK 308
VIGID G + +A+ + + IAN R TPS VAF++ R++GV+AK Q V N +
Sbjct: 52 VIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPE 111
Query: 309 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 488
NT F KRL+GR+F +P VQ+++K P+K+ + S+G + ++P QI +
Sbjct: 112 NTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLEA----RGKTYSPSQIGGFI 167
Query: 489 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTATALTY 668
L+K+++ A+T L + + V++VP+YF +++R R++NE TA AL Y
Sbjct: 168 LSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAY 227
Query: 669 GIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGG 824
G+ K++ V D G + +S N G + +T D GG
Sbjct: 228 GLDKKN-------DAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGG 272
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 94.7 bits (225), Expect = 1e-20
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Frame = +3
Query: 129 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMK 308
+VIGI FGN++ IA + G + +AN+ R PS +++ GV A+ Q+V N
Sbjct: 25 TVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNAD 84
Query: 309 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNE----DNVFTPEQI 476
N+V F+ LLG K D L + V G I V E + + T +
Sbjct: 85 NSVTNFRDLLG-KSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEA 143
Query: 477 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXXXRLMNETTAT 656
+ L +L + A L T++N CV+SVP YFT+A+R +L+++ A
Sbjct: 144 SVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAV 203
Query: 657 ALTYGIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAXCGG 824
L +Y +++ + VV +FG + +VS + G + ILA+ D GG
Sbjct: 204 ILAL-MYSEEV----LIDKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGG 254
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 780 YPY*KHKLKPVKNCDQSRQRQHFVVS-LQHQEDLVYKFHKLKLSQ-LSRS 637
Y Y K +L PV + D+S Q +V Q+D H+ LS +S+S
Sbjct: 169 YKYMKKRLPPVSDSDESNYCQRIIVKPYSSQKDYTQSTHEQTLSSPISKS 218
>SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +3
Query: 150 GNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFK 329
GN Y ++ GG I D L+ P + + +L + N V+ ++FG
Sbjct: 7 GNYHSYYSMR--GGTSII--DPRLKCLPDSLFYEAS--VLDIGCNNGTVSAQIASIFGAS 60
Query: 330 RLLGRKFSDPLVQKELKHFPF 392
+LG L+QK KH F
Sbjct: 61 FVLGLDIDHVLIQKARKHLEF 81
>SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 318
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 99 ENLSITMAAMSVIGIDFGN--ESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILG 272
E + I + +S++G ++ + + Y + K GG+ +A S S F+++ LG
Sbjct: 218 ETVDIAVFCLSLMGTNWQSFLKEAY-RILKVGGLLWVAEIKSRFSDKSGEVFAKELPKLG 276
Query: 273 VAAKNQMVTNMKNTVFGFKRL 335
K+ + N T+F FK++
Sbjct: 277 FETKSIQLQNKMFTLFEFKKV 297
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 485 VVDKTKRCCSNSFTDSNQRLCDICSQLF 568
V D KR N F D + R+C I + +F
Sbjct: 889 VKDSIKRLGDNKFEDKSLRICTIPNSIF 916
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 7.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 369 KELKHF-PFKVEQRSDGGIGIRVNYLNED----NVFTPEQITAMLLTKLKDVAATAL 524
KE K F P + Q +D +G N + +D N T + + L +KLK+ AAT L
Sbjct: 144 KEAKSFNPAEFFQTTDDLVGRTENRVKKDQIENNELTNQPFSGKLHSKLKEKAATEL 200
>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 568
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 432 VNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQIN 539
+ YLNE N+ TPE + + A + QIN
Sbjct: 417 IKYLNEHNILTPEGEQHKFGDDIAEAAERKMTDQIN 452
>SPBC543.10 |||GET complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 171
Score = 25.4 bits (53), Expect = 9.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 390 FKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQ 533
F ++ DG I V+ N ++ ++I LLT K++ AT+ Q Q
Sbjct: 21 FAKKRTIDGAYRIYVSVSNNKDLKKNKEILEQLLTVKKELNATSSQDQ 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,447,419
Number of Sequences: 5004
Number of extensions: 73780
Number of successful extensions: 180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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