Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H16
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0016 - 9659580-9659771,9659906-9660011,9661567-9661853 33 0.26
01_04_0138 + 16554175-16554822 33 0.26
12_01_0338 - 2594680-2594796,2595079-2595147,2595233-2595338,259... 30 1.9
09_03_0068 + 12047193-12047548,12048302-12048428 30 1.9
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522... 30 1.9
06_03_1056 + 27239176-27242361 29 2.4
02_05_0820 + 32017814-32017961,32018046-32018281,32018847-320189... 29 3.2
04_04_1180 - 31519713-31521419,31522308-31522533,31524097-31524215 29 4.3
04_04_1049 + 30414545-30414596,30414732-30414853,30415121-304151... 29 4.3
10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079,514... 28 5.6
08_02_0842 + 21754800-21754932,21755513-21756267 28 5.6
04_04_0868 + 28874332-28875747 28 5.6
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 28 7.5
09_04_0442 - 17630039-17630782 28 7.5
08_02_1449 - 27174451-27178005 28 7.5
04_04_1228 + 31888350-31892228,31892568-31893298,31893511-318935... 28 7.5
02_05_0400 + 28671562-28672219,28672365-28672441,28673679-286737... 28 7.5
12_02_0442 - 19118536-19119222 27 9.9
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 27 9.9
06_02_0254 - 13517352-13517557,13517612-13519073 27 9.9
05_04_0451 - 21365617-21366279 27 9.9
04_03_0843 - 20236179-20236544 27 9.9
03_01_0312 + 2469096-2470862 27 9.9
>10_06_0016 - 9659580-9659771,9659906-9660011,9661567-9661853
Length = 194
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -3
Query: 413 HPVRSPPPACVGVYGTSRA-RRRLAASWQECASCGTATQT--VPQFDGSSAPSTPGGIPL 243
HPV +PPPA + V + A + A A G Q V D AP TPGG+ L
Sbjct: 9 HPVEAPPPAALAVAAAAVAVEAGVGAGGGAAAHGGENAQPRGVRMKDPPGAPGTPGGLGL 68
>01_04_0138 + 16554175-16554822
Length = 215
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +1
Query: 388 AGGGERTGWKQRAHRRRAEGHHQQRLRPAPGHTL*SGDQAGSLEQRTQRALSLRGHELGH 567
AG G GW R R A H Q+R G T SG Q G + T+ EL
Sbjct: 32 AGHGHSRGWPDRPQRAAARSHQQRR---GAGGTGSSGAQRGKRREETEAVREREVAELTE 88
Query: 568 QH 573
H
Sbjct: 89 GH 90
>12_01_0338 -
2594680-2594796,2595079-2595147,2595233-2595338,
2596099-2596154,2596356-2596415,2596544-2596622,
2596870-2596964,2597085-2597198,2597642-2597693,
2598870-2599015
Length = 297
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 407 QDGNNARTGGAQRATTSSDSVPLPVILFDQ 496
Q N+A GA +TTS D++P PV+L DQ
Sbjct: 53 QSINSADVLGAS-STTSDDAIPQPVVLIDQ 81
>09_03_0068 + 12047193-12047548,12048302-12048428
Length = 160
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 386 KLEAGNGQDGNNARTGGAQRATTSSDS 466
KL G G DGN+AR+ A R+ S DS
Sbjct: 55 KLRGGGGGDGNSARSPPAGRSDMSGDS 81
>01_03_0175 +
13450869-13451013,13451293-13451372,13451417-13452240,
13452287-13452638
Length = 466
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 456 LVVALCAPPVRALFPSCPFPASSLCRSLWNLSCTTPVSRL 337
LV A+ A P+RA PSCP SS S + +P S L
Sbjct: 330 LVRAVLATPLRAFVPSCPRVCSSASSSSTIAAIVSPSSSL 369
>06_03_1056 + 27239176-27242361
Length = 1061
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 447 ALCAPPVRALFPSCPFPASSLCRSLWNLSCTTPVSRLMAGMCF 319
ALC R P CP P +S R+ L PV + A +CF
Sbjct: 641 ALCGGAARLRLPPCPAPGNSTRRAHLFLKIALPV--VAAALCF 681
>02_05_0820 +
32017814-32017961,32018046-32018281,32018847-32018951,
32019222-32019293,32019373-32019429
Length = 205
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 425 ARCFHPVRSPPPACVGVYGTSRARRRLAASWQECASCGTATQTVPQFDGSSAPST 261
A FH R+ PPA R+ R L CAS A VP + +SA ++
Sbjct: 20 ASSFHHRRAAPPAVAAAATLRRSNRHLPTRGWRCAS-AAAPDPVPSEEPASASAS 73
>04_04_1180 - 31519713-31521419,31522308-31522533,31524097-31524215
Length = 683
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 452 WWPSARRRCARCFHPVRSPPPACVGVYGTSRARRRLAASWQECA 321
W S C C + PP C G++G S R E A
Sbjct: 8 WMNSCPGLCRACSFGDETSPPVCTGIWGRSSISARTVRIGSEAA 51
>04_04_1049 +
30414545-30414596,30414732-30414853,30415121-30415198,
30415329-30415459,30415644-30417552,30417797-30417836,
30418194-30418259,30418583-30418734
Length = 849
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 340 AANRRRAREVP*TPTQAGGGERTGWKQRAHRRRAEGH 450
A RRRA VP AG W++R R RA H
Sbjct: 685 AKRRRRACAVPNVGQTAGDDGEAAWQRRRRRARAVPH 721
>10_02_0089 -
5138048-5138561,5138864-5139105,5139712-5140079,
5140862-5140943
Length = 401
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 80 VKMYIYELPPEINKEL 127
+K+Y+YELPP+ NK +
Sbjct: 35 LKVYVYELPPKYNKNI 50
>08_02_0842 + 21754800-21754932,21755513-21756267
Length = 295
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 371 GTSRARR-RLAASWQECASCGTATQTVPQFDGSSAPSTPGGIPLGICPDDEPS 216
G++R RR R A+W CG DG P+ GG+ C DD S
Sbjct: 180 GSARWRRGRAGAAW-----CGWQEDGATMGDGGDGPARCGGVAWETCGDDGDS 227
>04_04_0868 + 28874332-28875747
Length = 471
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 86 MYIYELPPEINKELCRLLDNFDYWEELAGNYMM--YTAMDVIEIKEKARHQGISPTEYLL 259
+Y+Y+LPP N++L L E LA Y + Y A D + K +Q P L+
Sbjct: 69 VYVYDLPPVFNEDLLALC------EVLAPMYSLCPYLANDGLGFPAKGGNQSEFPPAELV 122
Query: 260 ECW 268
W
Sbjct: 123 GSW 125
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 83 KMYIYELPPEINKELCR 133
++Y+YELPP N EL R
Sbjct: 82 RVYMYELPPRFNAELVR 98
>09_04_0442 - 17630039-17630782
Length = 247
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 343 ANRRRAREVP*TPTQAGGGERTGWKQRAHRRRAEGHHQQRLRPAPGH 483
A R R + + +G G R +R HRRR H RL+P P H
Sbjct: 173 ARIRSRRRLMRLSSSSGAGHRR--VKRWHRRRLPIHPPPRLKPPPPH 217
>08_02_1449 - 27174451-27178005
Length = 1184
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 188 TAMDVIEIKEKARHQGISPTEYLL---ECWGQKNHRIEELFVLLY 313
T D IE+ H+ + YLL + W ++ H+ EEL LL+
Sbjct: 251 TLPDRIELLRSRLHEVVGRKRYLLVLDDVWNEEEHKWEELRPLLH 295
>04_04_1228 + 31888350-31892228,31892568-31893298,31893511-31893586,
31894089-31894164,31894571-31894656,31895414-31895482,
31895579-31895588,31895711-31896207
Length = 1807
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 510 ACLIP*SKSMTGSGTESLLVVALCAPPVRAL-FPSCPFPASSLC 382
ACL+ + + + T+ L + C + A P CPFP+S C
Sbjct: 1291 ACLLQARQILARAATKHALQITKCPKFLSAYEAPGCPFPSSLQC 1334
>02_05_0400 +
28671562-28672219,28672365-28672441,28673679-28673730,
28673851-28674008
Length = 314
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 496 GDQAGSLEQRTQRALSLRGHELGHQHQHRH 585
G AG Q+ A + GH GH H H H
Sbjct: 65 GGGAGGFYQQAAVAPAANGHGHGHGHHHHH 94
>12_02_0442 - 19118536-19119222
Length = 228
Score = 27.5 bits (58), Expect = 9.9
Identities = 30/98 (30%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = -3
Query: 518 SREPA*SPDQRV*PGAGRSRCWWWPSARRRCARCFHPVRSPPPACVGVYGTSRARRR-LA 342
+ EP +P Q + RS W S RR R PPP G G RRR
Sbjct: 15 AEEPPKAPRQGLGRAKPRSEATRWQS-RRPVRRLDRSPDPPPPLLPGADGREEGRRRGTT 73
Query: 341 ASWQECASCG-TATQTVPQFDGSSAPSTPGGIPLGICP 231
A A G AT + SS+ S+ G G+ P
Sbjct: 74 AVVAPAARSGEPATDKLATPSASSSASSWGEEDGGVEP 111
>07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 320 SCGTATQT---VPQFDGSSAPSTPGGIPLGICPDDE 222
SC T Q VP+ D SS P+ PGG + DE
Sbjct: 1190 SCATQIQKDDHVPRLDESSVPNFPGGQDFSLISIDE 1225
>06_02_0254 - 13517352-13517557,13517612-13519073
Length = 555
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 86 MYIYELPPEINKELCRLLDNFDYW 157
+Y+Y+LPPE N +L D W
Sbjct: 86 IYVYDLPPEFNHDLVAHCDRLWPW 109
>05_04_0451 - 21365617-21366279
Length = 220
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 395 AGNGQDGNNART--GGAQRATTSSDSVPLPVILFDQGIRQAPSS 520
AG G +G AR GG R T S +P + + +G+ A SS
Sbjct: 98 AGGGGEGGRARRGGGGGGRKRTPPLSKTIPRVAYTEGLELAGSS 141
>04_03_0843 - 20236179-20236544
Length = 121
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = -3
Query: 437 RRRCARCFHPVRSPPPAC--VGV--YGTSRARRRL 345
RRRC R P R+ AC VG YG R RRR+
Sbjct: 79 RRRCGRRRRPRRATAVACDDVGAVDYGRQRDRRRI 113
>03_01_0312 + 2469096-2470862
Length = 588
Score = 27.5 bits (58), Expect = 9.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 86 MYIYELPPEINKELCRLLDNFDYWEEL 166
+Y++ELPP N ++ R + W +
Sbjct: 133 IYVHELPPRFNDDMLRECERLSLWTNM 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,094,591
Number of Sequences: 37544
Number of extensions: 472843
Number of successful extensions: 1932
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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