Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H14
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   7.0  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    23   7.0  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 425 QKEPETKKDASTKPERRAKDTDMLNTRTGGAYIPP 529
           Q+ PE     +   +    + +   TR GG YIPP
Sbjct: 21  QQAPEPMDADAADDDALMSEDEEGGTRIGGIYIPP 55


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 556  LRLHHPQSCWWNVCTSCS 503
            LR HH +SC    C  CS
Sbjct: 1822 LRKHHCRSCGQIFCAECS 1839


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 556  LRLHHPQSCWWNVCTSCS 503
            LR HH +SC    C  CS
Sbjct: 1823 LRKHHCRSCGQIFCAECS 1840


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +2

Query: 419 DTQKEPETKKDASTKPERRAKDTDMLNTR 505
           DT+++   ++   +KPE +A+  D+ ++R
Sbjct: 2   DTERQCAPEQSTESKPEGKARGADINSSR 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,313
Number of Sequences: 2352
Number of extensions: 9985
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)