Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H14
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical pr...    83   2e-16
U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin pro...    83   2e-16
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U67953-3|AAL13328.1|  321|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U23411-2|AAC46731.2|  471|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical
           protein F33A8.1 protein.
          Length = 897

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +2

Query: 395 AREDKRVKDTQKEPETKKDASTKPERRAKDT-DMLNTRTGGAYIPPARLRMMQAQITDKS 571
           +R  +R ++   E +  ++ +  PE++ K+  D+L TRTGGAYIPPA+LR+MQ QI+DK 
Sbjct: 122 SRSPRRRRERSSERKQSEEPAPLPEKKKKEPLDILRTRTGGAYIPPAKLRLMQQQISDKQ 181

Query: 572 SIAYQRLAWEALKKSXXXXXXXXXXXXXXXXXXELLKENIV 694
           S  YQR+ WE +KK                   ELL+EN++
Sbjct: 182 SEQYQRMNWERMKKKIHGLVNRVNAKNLVQIVRELLQENVI 222


>U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin
           protein.
          Length = 897

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +2

Query: 395 AREDKRVKDTQKEPETKKDASTKPERRAKDT-DMLNTRTGGAYIPPARLRMMQAQITDKS 571
           +R  +R ++   E +  ++ +  PE++ K+  D+L TRTGGAYIPPA+LR+MQ QI+DK 
Sbjct: 122 SRSPRRRRERSSERKQSEEPAPLPEKKKKEPLDILRTRTGGAYIPPAKLRLMQQQISDKQ 181

Query: 572 SIAYQRLAWEALKKSXXXXXXXXXXXXXXXXXXELLKENIV 694
           S  YQR+ WE +KK                   ELL+EN++
Sbjct: 182 SEQYQRMNWERMKKKIHGLVNRVNAKNLVQIVRELLQENVI 222


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 392 KAREDKRVKDTQKEPETKKDASTKPERRAKDTDMLNT 502
           K    K+ K+++K+ +TKK+  T  ER+ ++T    T
Sbjct: 829 KIASSKKSKESEKKKKTKKEKDTVKERKEEETTETTT 865


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 392 KAREDKRVKDTQKEPETKKDASTKPERRAKDTDMLNT 502
           K    K+ K+++K+ +TKK+  T  ER+ ++T    T
Sbjct: 845 KIASSKKSKESEKKKKTKKEKDTVKERKEEETTETTT 881


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 401  EDKRVKDTQKEPETKKDASTKPERRAKDTDMLNTRTGGAYIPPARLRMMQAQITD 565
            E  R+KDTQK  E K +A     +R KD ++  T T  A    ++L  +Q+++ D
Sbjct: 1537 EIDRMKDTQKVLEMKVEALQDELQRLKDNEIELTETISAL--QSKLYDVQSELED 1589


>U67953-3|AAL13328.1|  321|Caenorhabditis elegans Hypothetical
           protein ZC13.2 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 526 WNVCTSCSSIQHISIFCASFWLCRGIFFCFWLFLCVFNSFIFPSLVM 386
           W      S+I ++ I C  FW   G+FF F +   V ++ IF + ++
Sbjct: 164 WLEVIRISTIVYLVIIC--FWFGSGVFFIFTIRCEVLDTAIFNTTIL 208


>U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical
           protein T10E9.3 protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = -2

Query: 577 YRGLIRDLRLHHPQ---SCWWNVCTSCSSIQHISIFCASFW 464
           Y G + D    H     S  W  CT  S +QH++  C + +
Sbjct: 533 YLGKVNDWSEKHNMTVTSHMWKACTLLSQVQHVTTMCCTIF 573


>U23411-2|AAC46731.2|  471|Caenorhabditis elegans Hypothetical
           protein T25E4.2 protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 511 SCSSIQHISIFCASFWLCRGIFFCFWLFLCV 419
           SCS I H  +F  S  +C  +   FWL  C+
Sbjct: 161 SCSGIIHQFMFRISSPICALVLIGFWLLCCL 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,618,346
Number of Sequences: 27780
Number of extensions: 231864
Number of successful extensions: 764
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)