Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H05
(387 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17022-2|AAA28672.1| 708|Drosophila melanogaster protein ( D.me... 28 4.9
M17022-1|AAA28671.1| 1161|Drosophila melanogaster protein ( D.me... 28 4.9
AY051654-1|AAK93078.1| 1161|Drosophila melanogaster LD06034p pro... 28 4.9
AE014134-7|AAN10503.1| 1112|Drosophila melanogaster CG2671-PF, i... 28 4.9
AE014134-6|AAN10502.1| 1112|Drosophila melanogaster CG2671-PE, i... 28 4.9
AE014134-5|AAN10501.1| 1112|Drosophila melanogaster CG2671-PD, i... 28 4.9
AE014134-4|AAF51570.1| 1161|Drosophila melanogaster CG2671-PC, i... 28 4.9
AE014134-3|AAG22255.1| 1161|Drosophila melanogaster CG2671-PA, i... 28 4.9
AE014134-2|AAG22256.2| 1153|Drosophila melanogaster CG2671-PB, i... 28 4.9
>M17022-2|AAA28672.1| 708|Drosophila melanogaster protein (
D.melanogaster lethal(2)giant larvae gene, complete cds.
).
Length = 708
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 339 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 383
>M17022-1|AAA28671.1| 1161|Drosophila melanogaster protein (
D.melanogaster lethal(2)giant larvae gene, complete cds.
).
Length = 1161
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 339 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 383
>AY051654-1|AAK93078.1| 1161|Drosophila melanogaster LD06034p
protein.
Length = 1161
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 339 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 383
>AE014134-7|AAN10503.1| 1112|Drosophila melanogaster CG2671-PF,
isoform F protein.
Length = 1112
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 290 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 334
>AE014134-6|AAN10502.1| 1112|Drosophila melanogaster CG2671-PE,
isoform E protein.
Length = 1112
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 290 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 334
>AE014134-5|AAN10501.1| 1112|Drosophila melanogaster CG2671-PD,
isoform D protein.
Length = 1112
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 290 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 334
>AE014134-4|AAF51570.1| 1161|Drosophila melanogaster CG2671-PC,
isoform C protein.
Length = 1161
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 339 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 383
>AE014134-3|AAG22255.1| 1161|Drosophila melanogaster CG2671-PA,
isoform A protein.
Length = 1161
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 339 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 383
>AE014134-2|AAG22256.2| 1153|Drosophila melanogaster CG2671-PB,
isoform B protein.
Length = 1153
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 144 RQLLETFVGLL---LCAYETRVSNT-RLKAPFVXSCKLHSXLCNY 22
R + E V LL LCAY+ N +KAP++ S + CNY
Sbjct: 331 RDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLHSVHASAVTCNY 375
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,075,296
Number of Sequences: 53049
Number of extensions: 189689
Number of successful extensions: 356
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -