Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_H04
         (723 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1107 + 10205351-10207519                                         29   2.8  
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    29   3.7  
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745...    29   4.9  
06_03_0805 + 24775346-24775543,24775643-24775858,24775930-247759...    28   6.5  
01_06_0456 + 29521282-29522064                                         25   7.9  
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574...    28   8.6  

>07_01_1107 + 10205351-10207519
          Length = 722

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 239 GPSCTGSDNLALLIDTLKTVHRTVCDDEQVSLA 337
           GP   G D LA L   L+ VH  + D E++S+A
Sbjct: 44  GPVTVGDDELAALRSMLRRVHAALRDAERLSVA 76


>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 324 KCPWPVPQERLSAFKSHS 377
           +C WP+PQ  LSAF  H+
Sbjct: 54  RCEWPLPQVLLSAFSIHN 71


>07_01_1105 -
           10173039-10173156,10173715-10173716,10174550-10174584,
           10174696-10174765,10175163-10176707,10176770-10178062
          Length = 1020

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 239 GPSCTGSDNLALLIDTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGN 385
           GP   G D LA L   L+ VH  + D + +S+   T  S+ + +A+ G+
Sbjct: 38  GPVTVGDDELAALRSMLRRVHAALRDADSLSV---TDHSVRLWLAELGD 83


>06_03_0805 +
           24775346-24775543,24775643-24775858,24775930-24775970,
           24776510-24776551,24777019-24777055,24779796-24780092
          Length = 276

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 206 INHTCLHNIIN*LECSKVIDITHVQ 132
           I  +  HN+I   E  K+IDI+HVQ
Sbjct: 67  IRRSSYHNVIRVSEVGKLIDISHVQ 91


>01_06_0456 + 29521282-29522064
          Length = 260

 Score = 24.6 bits (51), Expect(2) = 7.9
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -2

Query: 329 TLAHHHTPFDELS*ECQS--AALNYLSRCRKGPRTP 228
           TL  HH  F  +S  CQ       Y+ R RK  + P
Sbjct: 171 TLRRHHQVFPHISSSCQGCFGVRRYILRHRKTQQAP 206



 Score = 21.8 bits (44), Expect(2) = 7.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 254 RCRKGPRTPGKPPTLLINHT 195
           RCR GPR     P++  N T
Sbjct: 219 RCRTGPRLAAPAPSVEENAT 238


>08_02_1236 +
           25454371-25456801,25456891-25457177,25457258-25457416,
           25457561-25457740,25457823-25458017,25459059-25459157,
           25459508-25460137,25460250-25460591
          Length = 1440

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +1

Query: 361 HSSRTVRECCAERPGLCGGDYADRHRRGEEM*MAKLYA-VFASANCGSGVPEEVPVHLQY 537
           H    +++  A+  GL   +     + G ++ +   +  V  SA+CG G   +V V    
Sbjct: 226 HDDSLIKQVDADATGLMEQEAISSEQDGSDVPIENGHTHVGVSADCGEGAKSDVQVDQSN 285

Query: 538 DAEARASGSLPLCE 579
             EA A+ + P+ E
Sbjct: 286 VEEANANSAKPVEE 299


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,747,686
Number of Sequences: 37544
Number of extensions: 379504
Number of successful extensions: 931
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)