Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H04
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 60 1e-09
Z83107-2|CAB05503.2| 356|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 46 2e-05
Z54306-1|CAE54881.1| 114|Caenorhabditis elegans Hypothetical pr... 37 0.013
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 33 0.21
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 33 0.21
U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 30 1.9
AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical ... 29 4.4
Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical
protein F32A7.3a protein.
Length = 461
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Frame = +2
Query: 272 LLIDTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEG--E 445
+L ++L++ CD E+++L+CP T IS+Q YG P++Q C + +E +
Sbjct: 43 ILRESLRSNRVQACDGERITLSCPRNTQISVQTGFYGRVVPENQLCPPQAGRKHSEANLD 102
Query: 446 KKCKWPNSMQYSLLQ--TVVQE-CQKKSQCIFSTTLKPGLADPCPSARKYVEMAYKCRPF 616
+S ++Q T + E C K+ +C DPCP+ KY++MAY C P
Sbjct: 103 PLSMIHHSSTCDVIQAHTRISELCDKRRKCTVVVDSNTFEDDPCPTTSKYLQMAYGCIPM 162
Query: 617 EFRSRTVC-------ENEVVKLXCNRNSRIAIFDAKYGXTP 718
F T C ++L C R+A++ A+ +P
Sbjct: 163 SFDEETFCTPKPTDPPRPEIRLECREGRRLAVYSAQMKTSP 203
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/109 (31%), Positives = 53/109 (48%)
Frame = +2
Query: 281 DTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKW 460
D T+ T+CD E L+CP G ISI + YG + C+ + ++ + C+
Sbjct: 34 DESGTISHTICDGEAAELSCPAGKVISIVLGNYGRFSVAV--CLPDNDIVPSN--INCQ- 88
Query: 461 PNSMQYSLLQTVVQECQKKSQCIFSTTLKPGLADPCPSARKYVEMAYKC 607
N S+L+ ++C S C F+ K DPCP+ KY+E+ Y C
Sbjct: 89 -NHKTKSILE---KKCNGDSMCYFTVDKKTFTEDPCPNTPKYLEVKYNC 133
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/109 (31%), Positives = 53/109 (48%)
Frame = +2
Query: 281 DTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKW 460
D T+ T+CD E L+CP G ISI + YG + C+ + ++ + C+
Sbjct: 34 DESGTISHTICDGEAAELSCPAGKVISIVLGNYGRFSVAV--CLPDNDIVPSN--INCQ- 88
Query: 461 PNSMQYSLLQTVVQECQKKSQCIFSTTLKPGLADPCPSARKYVEMAYKC 607
N S+L+ ++C S C F+ K DPCP+ KY+E+ Y C
Sbjct: 89 -NHKTKSILE---KKCNGDSMCYFTVDKKTFTEDPCPNTPKYLEVKYNC 133
>Z83107-2|CAB05503.2| 356|Caenorhabditis elegans Hypothetical
protein F32A7.3b protein.
Length = 356
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +2
Query: 506 CQKKSQCIFSTTLKPGLADPCPSARKYVEMAYKCRPFEFRSRTVC-------ENEVVKLX 664
C K+ +C DPCP+ KY++MAY C P F T C ++L
Sbjct: 21 CDKRRKCTVVVDSNTFEDDPCPTTSKYLQMAYGCIPMSFDEETFCTPKPTDPPRPEIRLE 80
Query: 665 CNRNSRIAIFDAKYGXTP 718
C R+A++ A+ +P
Sbjct: 81 CREGRRLAVYSAQMKTSP 98
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 281 DTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKW 460
D T+ T+CD E L+CP G ISI + YG + C+ + ++ C+
Sbjct: 34 DESGTISHTICDGEAAELSCPAGKVISIVLGNYGRFSV--AVCLPDNDIV--PSNINCQ- 88
Query: 461 PNSMQYSLLQTVVQECQKKSQCIF--STTLKPGLADPCPSARKYVEMAYKC 607
N S+L+ ++C K C F T L D CP KY+E+ ++C
Sbjct: 89 -NHKTKSILE---KKCNGKQTCRFFVDTFL---FDDACPMMSKYLEVQHEC 132
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 281 DTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKW 460
D T+ T+CD E L+CP G ISI + YG + C+ + ++ C+
Sbjct: 34 DESGTISHTICDGEAAELSCPAGKVISIVLGNYGRFSV--AVCLPDNDIV--PSNINCQ- 88
Query: 461 PNSMQYSLLQTVVQECQKKSQCIF--STTLKPGLADPCPSARKYVEMAYKC 607
N S+L+ ++C K C F T L D CP KY+E+ ++C
Sbjct: 89 -NHKTKSILE---KKCNGKQTCRFFVDTFL---FDDACPMMSKYLEVQHEC 132
>Z54306-1|CAE54881.1| 114|Caenorhabditis elegans Hypothetical
protein B0457.1c protein.
Length = 114
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 281 DTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYG 382
D T+ T+CD E L+CP G ISI + YG
Sbjct: 34 DESGTISHTICDGEAAELSCPAGKVISIVLGNYG 67
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 1/100 (1%)
Frame = +2
Query: 311 CDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKWPNSMQYSLLQ 490
C +CP +I++ A +G A + C E+ C NS LQ
Sbjct: 234 CGSNDFQFSCPNDQTITVDFASFG--AQESSMC----NQASQSREQTCSNVNS-----LQ 282
Query: 491 TVVQECQKKSQCIFSTTLKPGLADPCP-SARKYVEMAYKC 607
TV+ CQ C PCP +Y+E +C
Sbjct: 283 TVINACQGLQSCEIRNLTSTFSNTPCPVPQEQYLETRMRC 322
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 1/100 (1%)
Frame = +2
Query: 311 CDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKWPNSMQYSLLQ 490
C +CP +I++ A +G A + C E+ C NS LQ
Sbjct: 234 CGSNDFQFSCPNDQTITVDFASFG--AQESSMC----NQASQSREQTCSNVNS-----LQ 282
Query: 491 TVVQECQKKSQCIFSTTLKPGLADPCP-SARKYVEMAYKC 607
TV+ CQ C PCP +Y+E +C
Sbjct: 283 TVINACQGLQSCEIRNLTSTFSNTPCPVPQEQYLETRMRC 322
>U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical
protein T22F7.5 protein.
Length = 462
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 338 CPTGTSISIQVAQ--YGNAAPKDQGCVAETTLIGTEGEKKCKWPNSMQYSLLQTVVQECQ 511
CP GT ++ + + +G++ KD+ C+ + + S Y+L+Q Q+C
Sbjct: 267 CPNGTVCTLMMCKCAHGSSPYKDR-CLNNINICEAPRQPVI----SSDYTLIQCAKQKCP 321
Query: 512 KKSQCIFSTTLK 547
K S C++S ++
Sbjct: 322 KPSACVYSKMIQ 333
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 117 VVFVILNMSYIDDFRTF*LINDIM*TCMVY 206
VVF+IL +S+IDD + F +I+ + C+ Y
Sbjct: 177 VVFIILPLSFIDDLKKFSVISSV--ACLFY 204
>AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical
protein C36C9.5 protein.
Length = 484
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 302 RTVCDDEQVSLACPTGTSISIQVAQYGN 385
R +C DE+V+ A PT + V+++GN
Sbjct: 440 RPICPDEKVAQALPTEVKSNFLVSRFGN 467
>Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical
protein D1054.5 protein.
Length = 395
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 248 RKGPRTPGKPPTLLINHTCLHNIIN*LECSKVIDITHVQ 132
R P P + P ++ T HN I ECS +D T VQ
Sbjct: 226 RTPPPPPNRAPPAPLSFTRCHNTIVHPECSFQLDYTEVQ 264
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = +2
Query: 350 TSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKWPNSMQYSLLQTVVQECQKKSQCI 529
T +++ Y +P D GC +T + CK M S + + + + C+
Sbjct: 140 TYVAVDAYCYEKISPSDSGCFYDTQCASVWPDSYCKNGQCMCPS-EDMIAVKTKDGTLCV 198
Query: 530 FSTTLKPGLADPCPS 574
+ST+ +P P PS
Sbjct: 199 WSTSSEPSC--PLPS 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,023,800
Number of Sequences: 27780
Number of extensions: 330801
Number of successful extensions: 816
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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