Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H03
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-6|AAC46643.1| 470|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.9
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 1.9
>U13070-6|AAC46643.1| 470|Caenorhabditis elegans Hypothetical
protein F01F1.9 protein.
Length = 470
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 239 KDPILRAAAFTSVPQPASH*DLM*NLVFFTTRSFTAPTARGLVGEYGPGS 388
KD +L+A FT +P+ + H D+ +F T++ +A A + G Y PGS
Sbjct: 37 KDRLLQAG-FTELPE-SGHWDIQPTSKYFVTKNRSAILAFAVGGSYKPGS 84
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 1974 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2012
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2105
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 1880 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 1918
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2105
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 1974 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2012
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2105
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 1880 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 1918
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2105
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 459 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICSEWAAS 575
Y+ PS + VS++ G+ D GE E+IC+ +S
Sbjct: 2066 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICTATGSS 2104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,542,183
Number of Sequences: 27780
Number of extensions: 279390
Number of successful extensions: 697
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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