Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_H02
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondr... 163 5e-39
UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondr... 155 1e-36
UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA... 154 2e-36
UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma j... 94 3e-18
UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;... 77 3e-13
UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondr... 69 1e-10
UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal pr... 58 2e-07
UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and ma... 58 3e-07
UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.008
UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, wh... 41 0.034
UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112; Bacter... 40 0.078
UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast... 38 0.24
UniRef50_A6NRY7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 36 1.3
UniRef50_A3HUN9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A0AFR7 Cluster: Complete genome; n=7; Listeria|Rep: Com... 34 2.9
UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3; Anaplasm... 34 2.9
UniRef50_Q22KH8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q3Y0K3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q4N6B8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_Q23EV8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A6TVC2 Cluster: N-6 DNA methylase; n=1; Alkaliphilus me... 33 6.7
UniRef50_Q2S0L9 Cluster: Thioredoxin; n=1; Salinibacter ruber DS... 33 8.9
>UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondrial
39S ribosomal protein L3; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Mitochondrial 39S ribosomal
protein L3 - Nasonia vitripennis
Length = 375
Score = 163 bits (395), Expect = 5e-39
Identities = 80/159 (50%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Frame = +3
Query: 225 PRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNV 404
PR R P W+V + RV ++ LTKENK+F++ VI+DK A SP+ + + V
Sbjct: 39 PRKRFPPWFVKQTRVQHEEDLTKENKEFIQTVIRDKYPLPDIGFGSA--SPLKLETIEPV 96
Query: 405 T-WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVK 581
T W P +RVG++ARKIG P+W KDGKKV TT+ QV DNHVIKYIPPEEYKPMI
Sbjct: 97 TEWKPHYQRVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKN 156
Query: 582 WVEKQKYGCILXGAENIDPSVVTKDYCGIFDSVGMLPKR 698
+ + GC+L GA++ DP + TK+YCG+F+ G++PKR
Sbjct: 157 PLPRNT-GCLLVGADSCDPQLFTKEYCGLFNEAGVMPKR 194
>UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3 CG8288-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein L3
CG8288-PA - Apis mellifera
Length = 352
Score = 155 bits (376), Expect = 1e-36
Identities = 74/159 (46%), Positives = 106/159 (66%), Gaps = 1/159 (0%)
Frame = +3
Query: 225 PRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILND-VKKN 401
P+ R P W RV ++ LT ENK+FL E++ + L TSP+ N+ ++ N
Sbjct: 26 PKKRHPEWLPKPTRVLYNEELTSENKEFLSEIVSS---TKGLLNNN--TSPLNNELIQSN 80
Query: 402 VTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVK 581
TWTP +KR GLI +KIG YP+W K+G+KV TTL+Q+VDN V+KYIPPEEYKP+ ++
Sbjct: 81 ATWTPNSKRTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPV--KPIR 138
Query: 582 WVEKQKYGCILXGAENIDPSVVTKDYCGIFDSVGMLPKR 698
+ K GC++ GA N+DP ++TK+Y GIF+ G+ PK+
Sbjct: 139 HRIEVKNGCLVLGAINVDPQLLTKEYYGIFNKAGVTPKK 177
>UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA -
Drosophila melanogaster (Fruit fly)
Length = 362
Score = 154 bits (373), Expect = 2e-36
Identities = 73/164 (44%), Positives = 103/164 (62%)
Frame = +3
Query: 207 RGASRQPRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILN 386
+G +PR R P W++ KE +D +T ENKQF+ EV + ++ + +
Sbjct: 28 KGHLSRPRLRNPQWFLRKEITKYNDLMTAENKQFVNEVGTNNFGVPAVIKDSLVKTA--G 85
Query: 387 DVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI 566
WTP +R G+IARKIG YPLW K+G+++ TTLLQ+VDNHVIKYIPPEEY P
Sbjct: 86 PTANEAVWTPNLRRCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQ 145
Query: 567 KSNVKWVEKQKYGCILXGAENIDPSVVTKDYCGIFDSVGMLPKR 698
V + K+ GCIL G+E +P+++TK+Y GIF + G+LPK+
Sbjct: 146 VPTVANLHKR--GCILVGSETTNPALLTKEYAGIFRNSGVLPKK 187
>UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01793 protein - Schistosoma
japonicum (Blood fluke)
Length = 391
Score = 94.3 bits (224), Expect = 3e-18
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Frame = +3
Query: 234 RPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWT 413
+ P+W + + D+ +T ENK+FLE + ++EA T TSPI+ + V WT
Sbjct: 39 KKPFWVTQEANPYADEDITPENKEFLE---RQRIEALT-------TSPIITEQWTQVPWT 88
Query: 414 PQ-TKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI-------- 566
P T+R GLIA K+G YPLW K G+K+ T+ QV DNH ++Y PP E I
Sbjct: 89 PYVTQRCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHY 148
Query: 567 ----KSNVKWVEKQKYGCILXGAENIDPSVVTKDYCGIFDSVGMLPKR 698
K W+ ++++G L GA + D + G+ PKR
Sbjct: 149 WLNSKRPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKR 196
>UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;
n=31; Deuterostomia|Rep: Mitochondrial 39S ribosomal
protein L3 - Homo sapiens (Human)
Length = 348
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/97 (41%), Positives = 59/97 (60%)
Frame = +3
Query: 258 KERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGL 437
K W D++L++EN F+++++ D+ +AQ A + P+ ++ W P + RVGL
Sbjct: 44 KSGTWWDEHLSEENVPFIKQLVSDEDKAQLASK----LCPLKDEPWPIHPWEPGSFRVGL 99
Query: 438 IARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPE 548
IA K+G PLW KDG+K TLLQV D HV+KY E
Sbjct: 100 IALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKE 136
>UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L3 - Strongylocentrotus purpuratus
Length = 343
Score = 68.5 bits (160), Expect = 1e-10
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 7/139 (5%)
Frame = +3
Query: 285 LTKEN-KQFLEEVIKDKL--EAQTALEKKALTSPILNDVKK----NVTWTPQTKRVGLIA 443
L+KEN +F + ++ L E +T + K + T +++ +K+ WTPQ+KR G+IA
Sbjct: 60 LSKENFNRFKQRPVEGDLTKENETFVYKWSQTKHMMSPLKQAPWLKGEWTPQSKRAGVIA 119
Query: 444 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILXGA 623
K+G PLW K+GK+V TTLLQV++ +VI + P + + S+ + G +L A
Sbjct: 120 IKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHP----QGLNGSD-------RPGTVLVAA 168
Query: 624 ENIDPSVVTKDYCGIFDSV 680
+N P ++Y +F SV
Sbjct: 169 KNAPPYYKDEEYADLFKSV 187
>UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal
protein L3; n=2; Caenorhabditis|Rep: Putative
mitochondrial 39S ribosomal protein L3 - Caenorhabditis
elegans
Length = 403
Score = 58.4 bits (135), Expect = 2e-07
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Frame = +3
Query: 219 RQPRFRPPYWYVP-KERVWTDDY-LTKENKQFLEEVI-KDKLEAQT-ALEKKALTSPILN 386
R+ P W P KE V +++ K LE VI K+ L A T A + T+ +
Sbjct: 35 RRRTLTPAPWLPPVKESVPKSSVGISQGTKNLLETVIEKETLAASTIAFQNSQETNVSVV 94
Query: 387 DVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEE-YKPM 563
D+ + ++RVGL+ RKIG P W +G ++ T+L+V +NHV+ PE YK
Sbjct: 95 DIPDS------SRRVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSS 148
Query: 564 IKSNVKWVEKQ-KYGCILXGAENIDPSVVTKDYCGIFDSVGM 686
K + + GA N DP+ T Y F G+
Sbjct: 149 AVGKRKAFNRHGPMWRVTVGAGNDDPTKYTLGYRRQFVRAGI 190
>UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and
maintenance-related protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal large subunit
assembly and maintenance-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 308
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/96 (37%), Positives = 44/96 (45%)
Frame = +3
Query: 408 WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWV 587
WTPQT R GLIARK G LW DG++ T+LQV N V+++ PP P
Sbjct: 38 WTPQTLRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSP--------- 88
Query: 588 EKQKYGCILXGAENIDPSVVTKDYCGIFDSVGMLPK 695
Y + GA TK G F G+ PK
Sbjct: 89 ----YHTLQIGASPRREKTTTKQQLGHFKKAGVEPK 120
>UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 264
Score = 42.7 bits (96), Expect = 0.008
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 408 WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIK 533
W +KR G + K+G LW KDG+++ TL+Q+ D V++
Sbjct: 2 WQKSSKRTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQ 43
>UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 409
Score = 40.7 bits (91), Expect = 0.034
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +3
Query: 423 KRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI----KSNVKWVE 590
KR GLIA K+G W K G + + T+LQ+ +N V++ + + Y + + N+K ++
Sbjct: 149 KRAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQVVKNDTYTGLQIGAGRVNIKTLK 208
Query: 591 KQKYGCILXGAENIDPSVVTKDY 659
K + G L NI P K++
Sbjct: 209 KPQIGHFLKA--NIPPKKYIKEF 229
>UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112;
Bacteria|Rep: 50S ribosomal protein L3 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 233
Score = 39.5 bits (88), Expect = 0.078
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 399 NVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHV 527
N T TP R+GL+ RK+G ++ +DG+ + T+L V +N V
Sbjct: 7 NSTPTPAAHRLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRV 49
>UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast
precursor; n=6; Magnoliophyta|Rep: 50S ribosomal protein
L3-2, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 324
Score = 37.9 bits (84), Expect = 0.24
Identities = 31/94 (32%), Positives = 44/94 (46%)
Frame = +3
Query: 417 QTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 596
++KR G+IA K G LW K GK++ ++L V DN I S VK VEK+
Sbjct: 73 RSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDN--------------IVSQVKTVEKE 118
Query: 597 KYGCILXGAENIDPSVVTKDYCGIFDSVGMLPKR 698
+ G P ++K G F + G+ KR
Sbjct: 119 GIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKR 152
>UniRef50_A6NRY7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 442
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 225 PRFRPPYWYVPKERVWTDDYLTKENKQFLEEVI--KDKLEAQT--ALEKKALTSPILNDV 392
P+FR V ++W D+ L K F EV+ D E +T L + S +L +V
Sbjct: 282 PKFRGRLHLVTNGQIWNDELLGKITAVFQPEVLISIDAWEKETYEKLRRGGSYSQLLENV 341
Query: 393 KKNVTWTPQTKRVGLIAR 446
KK VT Q K ++AR
Sbjct: 342 KKYVTLQAQGKLSAVVAR 359
>UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 214
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 429 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPE 548
+GL+ RK+G ++ +DG+ V T+L V +N V + PE
Sbjct: 3 LGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPE 42
>UniRef50_A3HUN9 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 812
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 345 TALEKKALTSPILNDVK-KNVTWTPQTK 425
+ LE K L+ PILNDV +++TWTP+ K
Sbjct: 150 STLEAKKLSEPILNDVMGRSLTWTPENK 177
>UniRef50_A0AFR7 Cluster: Complete genome; n=7; Listeria|Rep:
Complete genome - Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 /SLCC5334)
Length = 2027
Score = 34.3 bits (75), Expect = 2.9
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +3
Query: 288 TKENKQFLEEVIKDK-----LEAQTALEKKALTSPILNDVKKN---VTWTPQTKRVGLIA 443
T N ++ +KDK L +L++K + + +KN +T T + + L+A
Sbjct: 50 TDNNVIVIKGAVKDKEYKLSLPKSISLDEKKTGKEVEYNKEKNELTITGTGEEMTLYLLA 109
Query: 444 RKIGNYPLWCKDGKKVSTTLLQVVDN 521
K+G Y L K+G KV L VV N
Sbjct: 110 SKVGTYDLELKEGDKVQAELELVVKN 135
>UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1008
Score = 34.3 bits (75), Expect = 2.9
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +3
Query: 519 NHVIKYIPPEEYKPMIKSNVKWVEKQKY 602
NH+ +IPPEEY+ ++ +NV++ +K+ +
Sbjct: 241 NHISPFIPPEEYECLMPNNVEYFKKKSF 268
>UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3;
Anaplasmataceae|Rep: 50S ribosomal protein L3 -
Ehrlichia canis (strain Jake)
Length = 231
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 423 KRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVI 530
KR+GL K+G+ ++ +GK++ TLL + D+ +I
Sbjct: 3 KRIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFII 38
>UniRef50_Q22KH8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1729
Score = 33.9 bits (74), Expect = 3.9
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Frame = +3
Query: 96 QLSILPKNCQNTMFPNSLKLLWGA------LQKSRFDNAACNIRGASRQPRFRPPYWYVP 257
Q SI+ KN N+ + +L LQK++ NI RQ +++P
Sbjct: 1526 QSSIISKNANNSTLASEKSILLNHSISANNLQKAKIQLFMKNINSKLRQSKYQP------ 1579
Query: 258 KERVWTDDY---LTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKN 401
E+++TD Y LTKE + ++E + + + ++ S L DV+KN
Sbjct: 1580 -EKMFTDRYEKQLTKEKQNQIDEQEQSQANNENKEFLDSIISEALQDVQKN 1629
>UniRef50_Q3Y0K3 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium DO|Rep: Putative uncharacterized
protein - Enterococcus faecium DO
Length = 291
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 243 YWYVPKERVWTDDYLTKENKQFLEEVIK---DKLEAQTALEKKALTSPILNDVKKNV 404
YWY PK+ D L K+FLE++++ +L +T L ++A+ I+ KK +
Sbjct: 12 YWYRPKKIFNDDGQLLGYQKKFLEDILQKSYKQLSKKTGLSERAIKDAIVYLEKKGI 68
>UniRef50_Q4N6B8 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1790
Score = 33.5 bits (73), Expect = 5.1
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 285 LTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKK--NVTWTPQTKR---VGLIARK 449
L + + +E+ K +E T ++ +LN V K ++ W T+R + L+ +K
Sbjct: 267 LPDDQEYSIEKDEKYSIELATYYPRRGF---VLNSVLKGEHIIWESATERCVSIRLVKKK 323
Query: 450 --IGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKY 602
+ L D ++ TTL + D++V K + EE+K K V + QKY
Sbjct: 324 GTVYGINLSLNDDRENHTTLNFIFDDYVFKNVTDEEFKEFGKKLVDPSDYQKY 376
>UniRef50_Q23EV8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 302
Score = 33.5 bits (73), Expect = 5.1
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 291 KENKQFLEEVIKD--KLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNYP 464
K++K+ LE+ D K + A+EK + +LN + +N +T ++R+ L ++K+ +
Sbjct: 103 KDSKEALEKADTDDNKQTQKEAIEKANKSIEMLNQMIQN--YTEISQRLTLYSQKVQSIS 160
Query: 465 LWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 596
+ K S +LQ+ + K+I EE K + K E++
Sbjct: 161 ---DEVVKASDEVLQIASQKIEKFIAEEEAKKAEEEEAKKAEEE 201
>UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1686
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 468 WCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 596
W G + T+ + + N +I YIP + P+I+S +K + Q
Sbjct: 506 WESQGNEKDTSYIYNISNLIISYIPERAFLPLIESKIKVKDSQ 548
>UniRef50_A6TVC2 Cluster: N-6 DNA methylase; n=1; Alkaliphilus
metalliredigens QYMF|Rep: N-6 DNA methylase -
Alkaliphilus metalliredigens QYMF
Length = 897
Score = 33.1 bits (72), Expect = 6.7
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Frame = +3
Query: 324 KDKLEAQTALEKKALTSPILNDVKK-----NVTWTPQTKRVGLIARKIGNYPLWCKDGK- 485
K L Q + TSP++ND+ K V T + +++ ++ Y L K+G
Sbjct: 701 KSNLNKQIKELEGKKTSPVVNDITKLIELFEVDNTSEMEKIVKANSELMAYELINKNGSF 760
Query: 486 ---KVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILXGAEN-IDPSVVTK 653
K+ L + +N VI I +EY ++ K +EK++ + A+ +D V+ K
Sbjct: 761 GKAKLRAALKEANENAVIPEIYADEYNSLLAYQAKMIEKEEADKTIKEAQKALDDLVLAK 820
>UniRef50_Q2S0L9 Cluster: Thioredoxin; n=1; Salinibacter ruber DSM
13855|Rep: Thioredoxin - Salinibacter ruber (strain DSM
13855)
Length = 307
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 255 PKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILND 389
P+ W D++L E K +EE K+ LEA + E + L P+L D
Sbjct: 131 PQLESWLDEHLPSEEKSRIEEA-KEALEAGSHQEAEHLLWPVLED 174
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,904,274
Number of Sequences: 1657284
Number of extensions: 12845159
Number of successful extensions: 34827
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34808
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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