Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G24
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      25   0.49 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.65 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.0  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 342 ASCFAPHPENQWTSDWLWHRVQWI 271
           ASC+A   ++QW + W +  ++W+
Sbjct: 246 ASCYATI-DSQWLAHWAFAPIRWV 268


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 254 HFRNYRDNTVLFRFTKS 204
           HF NY D+   FRF KS
Sbjct: 214 HFVNYIDDLFFFRFEKS 230


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 17/76 (22%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +3

Query: 216 PEQYCVVTVIPEMLMSFGGSTEPCAIANLMSIGSLGV--EQNK-KHAKVLFELVEKELGV 386
           P  Y +V    ++L+ F  ++   A++ L+ I ++ +    N+ K ++ + +L+E ++ +
Sbjct: 702 PIDYSLVFSETKLLL-FKITSVMIAVSGLVYIATVWICTLMNRCKFSEFMTKLLEFDVKL 760

Query: 387 PTDRMYITFQDEPTGN 434
            +DR+ I ++ + TG+
Sbjct: 761 QSDRLMIDYKTQKTGS 776


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 71  STSSRLKHNNNLKLYNASL*NRNQHFKIKNPN 166
           STS+   HNNN         N N H++  NPN
Sbjct: 370 STSNNRWHNNNGN-------NSNNHWRKNNPN 394


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 565 NMILSIL*IIMEAHHFSLFILWFGYCFYN 479
           NM+     II     F+  +  F YC+YN
Sbjct: 250 NMLFGFPIIIGCLIQFNTIVFSFCYCYYN 278


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 583 YSKDNFNMILSIL*IIMEAHHFSLFILWFGYCFYNVY 473
           Y   NF + +S L    E    +  ++WFGY    +Y
Sbjct: 265 YKLANFTVKISGL---FEITTITAMVMWFGYVIDTMY 298


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 195 LAKAL-GKPEQYCVVTVIPEMLMSFGGSTE 281
           L KA  G    YC++ ++  ++ S+G  TE
Sbjct: 273 LGKAYSGMYSMYCLLILLTTIVASYGSVTE 302


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 583 YSKDNFNMILSIL*IIMEAHHFSLFILWFGYCFYNVY 473
           Y   NF + +S L    E    +  ++WFGY    +Y
Sbjct: 221 YKLANFTVKISGL---FEITTITAMVMWFGYVIDTMY 254


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 195 LAKAL-GKPEQYCVVTVIPEMLMSFGGSTE 281
           L KA  G    YC++ ++  ++ S+G  TE
Sbjct: 273 LGKAYSGMYSMYCLLILLTTIVASYGSVTE 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,770
Number of Sequences: 336
Number of extensions: 3466
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)