Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G22
         (379 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IDB2 Cluster: BadF/BadG/BcrA/BcrD ATPase family super...    33   2.3  
UniRef50_Q54KD1 Cluster: Putative uncharacterized protein; n=1; ...    33   2.3  
UniRef50_Q0UHR7 Cluster: Putative uncharacterized protein; n=1; ...    31   5.4  
UniRef50_UPI0000D5596A Cluster: PREDICTED: hypothetical protein;...    31   7.1  

>UniRef50_Q0IDB2 Cluster: BadF/BadG/BcrA/BcrD ATPase family
           superfamily; n=11; Cyanobacteria|Rep:
           BadF/BadG/BcrA/BcrD ATPase family superfamily -
           Synechococcus sp. (strain CC9311)
          Length = 330

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 131 HWLRLGVGAGESHGHQQSNEGE-QFVEHVKSA 39
           +W  LG G G    H Q+NEGE +FVE ++S+
Sbjct: 46  NWQPLGEGKGSGVSHLQANEGETRFVEAIRSS 77


>UniRef50_Q54KD1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 510

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 33  ASCAFNMFYKLFTLIALLVAVAFASPNPKP 122
           A C F +F+ LFT+I LLV  AF  P  KP
Sbjct: 128 AGCKFTIFFILFTII-LLVVGAFVRPGSKP 156


>UniRef50_Q0UHR7 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 432

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 57  YKLFTLIALLVAVAFASPNPKPEPV 131
           +KLF ++ALLVA+AFA P P    V
Sbjct: 4   FKLFFVVALLVAIAFAVPAPSRRSV 28


>UniRef50_UPI0000D5596A Cluster: PREDICTED: hypothetical protein;
           n=3; Endopterygota|Rep: PREDICTED: hypothetical protein
           - Tribolium castaneum
          Length = 82

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 57  YKLFTLIALLVAVAFASPNPKPEP 128
           +KL    ALLVA AFA+PNP P P
Sbjct: 2   FKLICFFALLVA-AFAAPNPAPAP 24


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,556,848
Number of Sequences: 1657284
Number of extensions: 2814036
Number of successful extensions: 8637
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8625
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)