Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_G13
(850 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0458 + 25370542-25370597,25371591-25371679,25372687-253727... 73 3e-13
02_05_0126 + 26050093-26050247,26051654-26051727,26051819-260519... 66 3e-11
02_04_0627 + 24585712-24585845,24586415-24586503,24587039-245871... 63 3e-10
01_07_0100 + 41082662-41083039 42 5e-04
01_04_0016 + 15106791-15107102 42 8e-04
11_06_0600 + 25401849-25402175 39 0.004
10_06_0021 - 9701729-9701805,9701905-9701959,9702671-9702934 38 0.008
01_06_1217 + 35485182-35485949 38 0.008
08_02_1625 + 28336168-28336409,28336491-28336564,28337162-283372... 38 0.010
06_01_0863 + 6545563-6546714 38 0.010
04_03_0865 + 20402711-20404057 38 0.010
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 38 0.013
07_01_0425 + 3235338-3236108 38 0.013
07_03_1565 - 27760407-27760463,27760905-27761513 37 0.018
12_02_0650 + 21514015-21514329 37 0.023
05_05_0177 - 22993844-22994617 37 0.023
04_04_1325 + 32666302-32667633 37 0.023
02_01_0017 - 112766-113650 37 0.023
12_02_0649 + 21502917-21503228 36 0.031
11_06_0601 + 25407591-25407920 36 0.054
06_01_0847 - 6451525-6451678,6452870-6453066,6454300-6454591,645... 35 0.071
12_01_0485 - 3848721-3849227,3852019-3852369 35 0.094
11_06_0603 + 25416922-25417251 35 0.094
11_06_0605 + 25425964-25426293 34 0.12
05_03_0650 - 16582296-16583042 34 0.12
01_01_0666 + 5084920-5085297 34 0.16
07_01_0364 + 2710650-2711228 33 0.22
02_05_0750 - 31479876-31480985 33 0.22
03_05_0501 - 24944533-24945507 32 0.50
03_02_1040 + 13601779-13602390 32 0.50
05_02_0046 + 6004240-6004656 31 1.2
04_03_0764 + 19367257-19367664 31 1.2
02_03_0393 + 18514250-18514657 30 2.0
01_01_0989 + 7816812-7817195 29 3.5
05_07_0123 + 27847555-27847953 29 6.2
02_05_1236 + 35141404-35142731,35142753-35143089,35143228-351433... 29 6.2
01_06_0189 - 27319698-27320141 29 6.2
01_01_0523 + 3837452-3837512,3837923-3838060,3838196-3838236,383... 29 6.2
01_01_0957 + 7516314-7517489 28 8.2
>04_04_0458 +
25370542-25370597,25371591-25371679,25372687-25372785,
25372960-25373054
Length = 112
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +2
Query: 2 PYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDV 181
P+C K +FE++ K IEL+ DG+ +Q LA+ TG RTVP VFING +GG D
Sbjct: 24 PFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDT 83
Query: 182 KALYESGKLEPML 220
AL GKL P+L
Sbjct: 84 LALNNEGKLVPLL 96
>02_05_0126 +
26050093-26050247,26051654-26051727,26051819-26051917,
26052003-26052070
Length = 131
Score = 66.5 bits (155), Expect = 3e-11
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +2
Query: 2 PYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDV 181
PY AK +F +K+ ++EL+ R+DG IQ L L G TVPQVF+NG VGG D
Sbjct: 52 PYSMRAKRIFRDLKENPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDT 111
Query: 182 KALYESGKLEPML 220
+ +G+L+ +L
Sbjct: 112 ANAHSNGQLQKLL 124
>02_04_0627 +
24585712-24585845,24586415-24586503,24587039-24587137,
24587326-24587405
Length = 133
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +2
Query: 2 PYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDV 181
P+C K + ++ K +EL+ DG+ +Q LA TG RTVP VFI G +GG D
Sbjct: 50 PFCARVKRLLAELAASYKAVELDVESDGSELQSALADWTGQRTVPCVFIKGKHIGGCDDT 109
Query: 182 KALYESGKLEPML 220
A+++ G L P+L
Sbjct: 110 MAMHKGGNLVPLL 122
>01_07_0100 + 41082662-41083039
Length = 125
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 CKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRT--VPQVFINGNCVGGGSDV 181
C + K +F ++ V E+++ +G ++ LA + G RT VP VFI G VG V
Sbjct: 25 CHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG-RTPPVPAVFIGGKLVGPTDQV 83
Query: 182 KALYESGKLEPML 220
+L+ +GKL P+L
Sbjct: 84 MSLHLAGKLVPLL 96
>01_04_0016 + 15106791-15107102
Length = 103
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 56 VIELNERDDGNTIQDNLAQLTGFR-TVPQVFINGNCVGGGSDVKALYESGKLEPML 220
V+EL+E G ++ LA+L G VP VFI G VG V +L+ SG L P+L
Sbjct: 40 VVELDEDPRGKEMEKALARLLGRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLL 95
>11_06_0600 + 25401849-25402175
Length = 108
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 119 GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 220
G R +P VF+ GN VGG + V +L+ +G+L PML
Sbjct: 67 GGRALPAVFVGGNLVGGANRVMSLHLAGELVPML 100
>10_06_0021 - 9701729-9701805,9701905-9701959,9702671-9702934
Length = 131
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 128 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 226
T+PQVF+ G +GG +V+ L+ESG+L ++ G
Sbjct: 20 TLPQVFVGGRHLGGAEEVRRLHESGELRRVVAG 52
>01_06_1217 + 35485182-35485949
Length = 255
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 128 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 226
T+PQVF+ G +GG +V+ L+ESG+L ++ G
Sbjct: 163 TLPQVFVGGRHLGGAEEVRRLHESGELRRVVAG 195
>08_02_1625 +
28336168-28336409,28336491-28336564,28337162-28337236,
28337433-28337459,28339261-28339634,28339746-28340492
Length = 512
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 5 YCKLAKDVFEKVKQPIKVIELNERD-DGNTIQDNLAQLTGFRTVPQVFINGNCVGG 169
Y K +F+++ VIEL++ G +Q L +LTG TVP VFI G +GG
Sbjct: 82 YSMEVKALFKRIGVQPHVIELDQLGAQGPQLQKVLERLTGQSTVPNVFIGGKHIGG 137
>06_01_0863 + 6545563-6546714
Length = 383
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 125 RTVPQVFINGNCVGGGSDVKALYESGKLEPMLI 223
R +PQVF++G VGG DV+ ++ESG+L L+
Sbjct: 276 RPLPQVFVDGCHVGGAEDVRRMHESGELTGTLL 308
>04_03_0865 + 20402711-20404057
Length = 448
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +2
Query: 50 IKVIELNERDDGNTIQDNLAQLTGFRTV--PQVFINGNCVGGGSDVKALYESGKLEPMLI 223
+K+IE + D ++ L L G R V P VF+ G VGG ++V L E GKL+ +L
Sbjct: 334 VKLIERDVSMDSG-YREELRLLLGGREVRVPAVFVRGRHVGGAAEVTKLEEEGKLKALLQ 392
Query: 224 G 226
G
Sbjct: 393 G 393
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 2 PYCKLAKDVFEKVKQPIKVIELNERD--DGNTIQDNLAQLTGFRTVPQVFINGNCVGGGS 175
P C ++ V + +KQ + +E D N +++ + + + + T PQ++ G +GG
Sbjct: 174 PRCGFSRKVVDVLKQ--EGVEFGSFDILTDNDVREGMKKFSNWPTFPQLYCKGELLGGCD 231
Query: 176 DVKALYESGKLE 211
V A++ESG+L+
Sbjct: 232 IVIAMHESGELK 243
Score = 36.7 bits (81), Expect = 0.023
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +2
Query: 26 VFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGK 205
+ ++ K P ++ D+ ++ L L+ + + PQ++ING VGG V +++SG+
Sbjct: 321 ILKQEKIPFSSFDILTDDE---VRQGLKLLSNWPSYPQLYINGELVGGSDIVMEMHKSGE 377
Query: 206 LEPML 220
L+ +L
Sbjct: 378 LKKVL 382
>07_01_0425 + 3235338-3236108
Length = 256
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 IQDNLAQLTGFRTVP-QVFINGNCVGGGSDVKALYESGKLEPML 220
++D L +TG + VP ++F+ G VGG + V AL+E G+L +L
Sbjct: 150 LRDELWSVTGEKAVPPRLFVRGRDVGGAAQVLALHEDGRLLALL 193
>07_03_1565 - 27760407-27760463,27760905-27761513
Length = 221
Score = 37.1 bits (82), Expect = 0.018
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 128 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 226
++PQ+ + G VGG +VK L+ESG+L +L G
Sbjct: 122 SLPQLLVGGRLVGGADEVKQLHESGQLRRLLDG 154
>12_02_0650 + 21514015-21514329
Length = 104
Score = 36.7 bits (81), Expect = 0.023
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 2 PYCKLAKDVFEKVKQPIKVIELNERDD--GNTIQDNLAQLTGFRT-VPQVFINGNCVGGG 172
P C +F + V EL +RD G ++ +LA+ G VP VFI G VG
Sbjct: 22 PMCHTVVSLFSDLGVGAAVHEL-DRDPLHGRDMERDLARRLGRSPPVPAVFIAGKLVGST 80
Query: 173 SDVKALYESGKLEPML 220
V +L+ +GKL PML
Sbjct: 81 DRVMSLHLAGKLVPML 96
>05_05_0177 - 22993844-22994617
Length = 257
Score = 36.7 bits (81), Expect = 0.023
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 131 VPQVFINGNCVGGGSDVKALYESGKL 208
+PQVF+NG +GG +V+ L+ESG+L
Sbjct: 167 LPQVFVNGRHLGGAEEVRRLHESGEL 192
>04_04_1325 + 32666302-32667633
Length = 443
Score = 36.7 bits (81), Expect = 0.023
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Frame = +2
Query: 59 IELNERDDGN--TIQDNLAQLTG-----FRTVPQVFINGNCVGGGSDVKALYESGKLEPM 217
+ L+ERD + LA+L G +P+VF++G +GG DV AL+E+ +L M
Sbjct: 316 VRLDERDVSMHAVFRAELAELLGPGGFACAALPRVFVDGRYLGGAEDVHALHEAAELARM 375
Query: 218 LIG 226
L G
Sbjct: 376 LEG 378
>02_01_0017 - 112766-113650
Length = 294
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 131 VPQVFINGNCVGGGSDVKALYESGKLEPMLIG 226
VP++F+ GN VGG ++V L E GKL +L G
Sbjct: 190 VPRLFVRGNHVGGAAEVARLEEEGKLAALLEG 221
>12_02_0649 + 21502917-21503228
Length = 103
Score = 36.3 bits (80), Expect = 0.031
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 56 VIELNERDDGNTIQDNLAQLTGFRT-VPQVFINGNCVGGGSDVKALYESGKLEPML 220
V EL++ G ++ L +L G VP VFI G VGG + + +L+ G+L PML
Sbjct: 40 VHELDQDPRGKEMERALLKLLGRGPPVPVVFIGGKLVGGTNKIMSLHLGGELIPML 95
>11_06_0601 + 25407591-25407920
Length = 109
Score = 35.5 bits (78), Expect = 0.054
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 119 GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 220
G VP VFI G+ VGG S V A++ G+L P+L
Sbjct: 68 GGPAVPAVFIGGSLVGGTSKVMAMHLKGELVPLL 101
>06_01_0847 -
6451525-6451678,6452870-6453066,6454300-6454591,
6454622-6454654,6454869-6455102,6455204-6455259,
6455552-6456754
Length = 722
Score = 35.1 bits (77), Expect = 0.071
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +2
Query: 8 CKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKA 187
CK+ + F + K +K +E+N D + + L TG TVP+V+ N +GG +++K
Sbjct: 256 CKMVRS-FMRQKM-LKYVEINI-DIFPSRKMELENNTGSSTVPKVYFNDLLIGGLTELKK 312
Query: 188 LYESGKLE 211
+ ESG L+
Sbjct: 313 MEESGILD 320
>12_01_0485 - 3848721-3849227,3852019-3852369
Length = 285
Score = 34.7 bits (76), Expect = 0.094
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 59 IELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKL 208
+++ + + + +++ L + + T PQVF+ G VGG V ++ E G+L
Sbjct: 230 VDVLDEEHNHGLRETLKTYSNWPTFPQVFVGGELVGGCDIVSSMAEKGEL 279
>11_06_0603 + 25416922-25417251
Length = 109
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 119 GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 220
G VP VFI G+ VGG S V ++ G+L PML
Sbjct: 68 GGPAVPAVFIGGSLVGGTSKVMTVHLKGELVPML 101
>11_06_0605 + 25425964-25426293
Length = 109
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 119 GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 220
G VP VFI G+ VG S V A++ G+L PML
Sbjct: 68 GGPAVPAVFIGGSLVGSTSKVMAMHLKGELVPML 101
>05_03_0650 - 16582296-16583042
Length = 248
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 131 VPQVFINGNCVGGGSDVKALYESGKLEPMLIG 226
+PQ+F+ G VG +V+ L+ESG+L ++ G
Sbjct: 159 LPQLFVGGRLVGDADEVRLLHESGELHRVVAG 190
>01_01_0666 + 5084920-5085297
Length = 125
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 80 DGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 220
+G ++ A L G +P +F+ G+ VGG + L+ SG+L P L
Sbjct: 71 EGGAAEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRL 117
>07_01_0364 + 2710650-2711228
Length = 192
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 56 VIELNERDDGNTIQDNLAQLT--GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 220
V EL++ IQ L+QL G VP VF+ G +GG V A + +G L P+L
Sbjct: 128 VYELDQLAAAADIQAALSQLLPPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLL 184
>02_05_0750 - 31479876-31480985
Length = 369
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 128 TVPQVFINGNCVGGGSDVKALYESGKLEPML 220
++PQVF +G +GG +V+ ++ESG+L L
Sbjct: 274 SLPQVFADGRHLGGAEEVRRMHESGELSKAL 304
>03_05_0501 - 24944533-24945507
Length = 324
Score = 32.3 bits (70), Expect = 0.50
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 134 PQVFINGNCVGGGSDVKALYESGKLEPML 220
P++F++G +GG ++V L+E +L P+L
Sbjct: 235 PRLFVDGRYLGGANEVVTLHEQARLRPVL 263
>03_02_1040 + 13601779-13602390
Length = 203
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 128 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 226
++PQ+ + VGG +V+ L+E+G+L +L G
Sbjct: 114 SLPQLLVGARLVGGADEVRQLHEAGELRRLLEG 146
>05_02_0046 + 6004240-6004656
Length = 138
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 8 CKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKA 187
C + + + V VIEL+E ++ A VP +F+ G VGG +
Sbjct: 65 CHVMRRLLAAVGAHATVIELDE-----AAEEAAASAAAAAAVPALFVGGAPVGGLDGLMG 119
Query: 188 LYESGKLEPML 220
L+ SG+L P L
Sbjct: 120 LHLSGRLVPRL 130
>04_03_0764 + 19367257-19367664
Length = 135
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +2
Query: 8 CKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGF-----RTVPQVFINGNCVGGG 172
C K +F + V EL+ G ++ LA+L G VP VFI G VG
Sbjct: 52 CHAVKRLFCGMGVHPAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAM 111
Query: 173 SDVKALYESGKLEPML 220
V A + +G L P+L
Sbjct: 112 DRVMAAHINGSLVPLL 127
>02_03_0393 + 18514250-18514657
Length = 135
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = +2
Query: 8 CKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR--------TVPQVFINGNCV 163
C K +F + V EL+ G ++ LA+L G+ VP VFI G V
Sbjct: 49 CHAVKRLFCGMGVHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLV 108
Query: 164 GGGSDVKALYESGKLEPML 220
G V A + +G L P+L
Sbjct: 109 GAMDRVMAAHINGSLVPLL 127
>01_01_0989 + 7816812-7817195
Length = 127
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 134 PQVFINGNCVGGGSDVKALYESGKLEPML 220
P VFI G VGG + A++ +G+L P+L
Sbjct: 91 PAVFIGGRLVGGLDRLMAMHMAGELVPVL 119
>05_07_0123 + 27847555-27847953
Length = 132
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 131 VPQVFINGNCVGGGSDVKALYESGKLEPML 220
+P VF+ G +GG + A++ SG+L P+L
Sbjct: 95 LPAVFVGGRLLGGLDRLMAVHISGELVPIL 124
>02_05_1236 +
35141404-35142731,35142753-35143089,35143228-35143305,
35143395-35143703,35144449-35144572,35144620-35144789
Length = 781
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 619 CYHVLSKIDKFRLWYHVKMTEKKE 690
C H + ++ KFR WYH+ E E
Sbjct: 731 CLHFIDELSKFRPWYHLFTDEGVE 754
>01_06_0189 - 27319698-27320141
Length = 147
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 131 VPQVFINGNCVGGGSDVKALYESGKLEPML 220
+P VF+ G +GG + A++ SG+L P+L
Sbjct: 110 LPAVFVGGKLLGGLDRLMAVHISGELVPIL 139
>01_01_0523 +
3837452-3837512,3837923-3838060,3838196-3838236,
3839095-3839172,3842040-3842115,3842921-3843081,
3843221-3843320,3843416-3843482,3843974-3844088,
3844156-3844221
Length = 300
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 116 TGFRTVPQVFINGNCVGGGSDVKALYESGKL 208
T + T PQ+FI G VGG + ++++ +L
Sbjct: 241 TNWPTFPQIFIKGEFVGGSDIILDMHQASEL 271
>01_01_0957 + 7516314-7517489
Length = 391
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 134 PQVFINGNCVGGGSDVKALYESGKLEPML 220
P++F+ G +GG L ESGKL M+
Sbjct: 295 PRLFVMGRYLGGADACAELAESGKLREMM 323
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,619,467
Number of Sequences: 37544
Number of extensions: 361952
Number of successful extensions: 757
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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