Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G11
         (374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-8|CAA21611.1|  172|Caenorhabditis elegans Hypothetical ...    39   0.001
Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical pr...    28   1.9  
AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical ...    28   2.5  
Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical pr...    27   4.4  

>AL032637-8|CAA21611.1|  172|Caenorhabditis elegans Hypothetical
           protein Y43F8C.8 protein.
          Length = 172

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +2

Query: 5   DLELSSRFLGSSTDLTLLEADCKLLGIIS 91
           D ELS RFLGS  DLTLLEAD  L+ ++S
Sbjct: 114 DPELSERFLGSKHDLTLLEADAVLVRLLS 142


>Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 116 VN*MNKLLNIVICFCLVFVQIVNRF 190
           VN +   L+ VIC CLV + +VNR+
Sbjct: 154 VNNIQVALSFVICLCLVVLFLVNRY 178


>Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 116 VN*MNKLLNIVICFCLVFVQIVNRF 190
           VN +   L+ VIC CLV + +VNR+
Sbjct: 154 VNNIQVALSFVICLCLVVLFLVNRY 178


>AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical
           protein Y113G7A.1 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 110 VSVN*MNKLLNIVICFCLVFVQIVNRFLM 196
           V ++  N+LLN +I FCL F  IV+  +M
Sbjct: 260 VYIHHQNQLLNNLIVFCLAFHGIVSTLIM 288


>Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical
           protein ZK632.11 protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +2

Query: 5   DLELSSRFLGSSTDLTLLEADCKLLGIISTPTKPAVSVN*MNKLLNIVICF 157
           D+E S   +GSS     LE  C LLG +STP    V+V   N +   + CF
Sbjct: 68  DVEKSGEDIGSSEWRKRLE--CTLLGSVSTP----VTVKKENNIRKKISCF 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,024,519
Number of Sequences: 27780
Number of extensions: 56205
Number of successful extensions: 140
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)