Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G10
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p pro...    28   7.7  
BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p pro...    28   7.7  
AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-P...    28   7.7  

>BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p
           protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 15  SVTLRRTKQTIKMFKYLIFVALLAFASAKP 104
           S T  + ++++ MFK ++  ALLA A A+P
Sbjct: 4   STTQTKKQKSLNMFKLVVLSALLAVAVARP 33


>BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p
           protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 195 STQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWL 94
           S  +  G   TQ + +Q+ QQLQ  C  P   WL
Sbjct: 87  SGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWL 120


>AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-PA
           protein.
          Length = 638

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 195 STQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWL 94
           S  +  G   TQ + +Q+ QQLQ  C  P   WL
Sbjct: 324 SGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWL 357


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,867,223
Number of Sequences: 53049
Number of extensions: 206273
Number of successful extensions: 892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)