Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G05
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                31   0.009
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    29   0.048
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    29   0.048
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    29   0.064
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    26   0.45 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.59 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    24   1.8  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 31.5 bits (68), Expect = 0.009
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 707 CHSMGIMHXDVKPHNVMI 760
           CH+ GI+H DVKP N+++
Sbjct: 171 CHNAGIVHADVKPKNILM 188


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 0.048
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 710 HSMGIMHXDVKPHNVMIDHEH 772
           HS G++H DVK  NV++D E+
Sbjct: 714 HSQGLVHRDVKLKNVLLDIEN 734


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 29.1 bits (62), Expect = 0.048
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 710 HSMGIMHXDVKPHNVMIDHEH 772
           HS G++H DVK  NV++D E+
Sbjct: 752 HSQGLVHRDVKLKNVLLDIEN 772


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 28.7 bits (61), Expect = 0.064
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 707 CHSMGIMHXDVKPHNVMI 760
           CH  G++H D+KP N+++
Sbjct: 25  CHHNGVVHRDLKPENLLL 42


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +2

Query: 710 HSMGIMHXDVKPHNVMIDHE 769
           HS  I++ D+KP N+++D +
Sbjct: 483 HSRNIIYRDLKPENLLLDSQ 502


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 551 ISLQAVVKDPVSRTPALIFEH--VNNTDFKQLYSTLSDYD 664
           I   A+   P+ ++P + F +   N TD   +Y TL+D+D
Sbjct: 64  IGADALWLSPIYKSPQVDFGYDISNFTDVDPVYGTLADFD 103


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 710 HSMGIMHXDVKPHNVMIDHE 769
           H  GI++ D+K  NV++D +
Sbjct: 102 HGRGIVYRDLKLDNVLLDQD 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,825
Number of Sequences: 438
Number of extensions: 3523
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)