Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G01
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   9.3  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.3  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 116 LSCFLLKIYVIFTLFVSY 63
           ++CFLL +Y I++   SY
Sbjct: 6   IACFLLLLYYIYSKHYSY 23


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +2

Query: 377 FNQY---FVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATVFWWGWT-- 541
           FN Y   F  I +F+ +      +++ +      KRR+      + L++A  F+  WT  
Sbjct: 64  FNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNIGLVVANAFFLLWTPA 123

Query: 542 TLFNVIENN 568
            +F V+  N
Sbjct: 124 VIFVVLSKN 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 67   PTFPLSYFTVTHTR*LGTDTTD 2
            P  P    T T +R +GTDT+D
Sbjct: 2298 PMVPDKPVTTTTSRPIGTDTSD 2319


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 166 IILCPVIHTCVFEI 125
           IILC V  TCV+ +
Sbjct: 5   IILCLVYATCVYSV 18


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 729 LKITSEMKDTHGVLMTK 779
           LK+T+ + D HG L  K
Sbjct: 77  LKLTNNISDKHGFLKEK 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,995
Number of Sequences: 336
Number of extensions: 4302
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)