Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_G01
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81143-6|CAI58649.1|  283|Caenorhabditis elegans Hypothetical pr...    85   8e-17
Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical pr...    32   0.59 
AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical...    30   1.8  
Z46828-7|CAA86860.1|  311|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AC024788-1|AAF60612.2|  235|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin pro...    28   7.3  
Z73969-21|CAI46568.2|  272|Caenorhabditis elegans Hypothetical p...    28   9.6  
Z70783-12|CAI46596.2|  272|Caenorhabditis elegans Hypothetical p...    28   9.6  

>Z81143-6|CAI58649.1|  283|Caenorhabditis elegans Hypothetical
           protein ZK265.9 protein.
          Length = 283

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
 Frame = +2

Query: 185 TKPTREASSIQEVLTLMIVHICKKILFFDTNXXXXXXXXXXXXXXXXXDVLTFPKSYFS- 361
           TK     +S       + V I ++ILF D                     +    +Y+  
Sbjct: 14  TKRPASPNSTPNAALGIFVAIARQILFIDARKVALFYLAFVTVLSFIESRIELDSTYYLV 73

Query: 362 RSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATVFWWGWT 541
           +  +  NQY VK+GWFWTLVI  P++  +S       R       + RL + T  W+   
Sbjct: 74  QKHSVLNQYGVKMGWFWTLVIVGPFIWFSSKAHNRRDRDQ-PIVDVCRLGVGTACWYFSV 132

Query: 542 TLFNVIENNYGRCNSKSYDNKITCLKNGSFWN-GFDISGHCFILIYSSLVLIEEARAING 718
             F+ +      C+      +  C +    W  G+DISGHCF++IYS L++ EEA A   
Sbjct: 133 QFFHKVLALTSMCDKGRTLTRAQCSEKEGVWTPGYDISGHCFLMIYSILIITEEAIAYRH 192

Query: 719 WERIKDYIRDERYSRSIDDK 778
           ++++ D +      R   D+
Sbjct: 193 YQQVTDAVHQMDGDREEHDR 212


>Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical
           protein W09D12.3 protein.
          Length = 309

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 16/53 (30%), Positives = 33/53 (62%)
 Frame = +2

Query: 536 WTTLFNVIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCFILIYSSLVLI 694
           WTT+  ++EN + + +S+ +++ I  L    F N F +SG+  +LI +S++ +
Sbjct: 189 WTTV--LLENRWKKSHSRRHNHFIKKLTRVIFCNSFLMSGNLLLLIATSVMYV 239


>AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical
           protein F41E6.14 protein.
          Length = 656

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 536 WTTLFNVIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCFILIYSSLVLI 694
           W  L   +  +  + N+++ D  I   KN   WN FDI  + F+ + ++++++
Sbjct: 195 WQFLLGSVAFDLSQKNNETMDFYIEMKKNKENWNLFDIVPYIFLAVLTTVLIL 247


>Z46828-7|CAA86860.1|  311|Caenorhabditis elegans Hypothetical
           protein R03D7.7 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 128 FKNTRMNYRAQNDSPEPKGTKPTREASSIQEVLTLMIVHICKK 256
           F+ + M+ R ++   EPK TKP    SS   + TL     CKK
Sbjct: 4   FRTSPMSRREKSLPIEPKYTKPQANGSSFPPIFTLEGSTPCKK 46


>Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical
           protein C44C10.7 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 554 VIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCF 664
           +I+N+  R N   YD  I  ++N S +N  ++ GHC+
Sbjct: 300 IIKNDPNRFN---YDCVIHAIENASLFNPSEVIGHCY 333


>AC024788-1|AAF60612.2|  235|Caenorhabditis elegans Hypothetical
           protein Y46E12A.3 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 757 VSFISDVIFNALPSIYCSGFFY*N 686
           V F  D+IF++LP IY  G+F  N
Sbjct: 128 VEFQKDLIFDSLPLIYVDGYFLGN 151


>Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical
           protein F33A8.1 protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 137 TRMNYRAQNDSPEPKGTKPTREASS 211
           T  +YR++  SP PK +K TRE+ S
Sbjct: 78  TPNSYRSRETSPAPKRSKETRESES 102


>U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin
           protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 137 TRMNYRAQNDSPEPKGTKPTREASS 211
           T  +YR++  SP PK +K TRE+ S
Sbjct: 78  TPNSYRSRETSPAPKRSKETRESES 102


>Z73969-21|CAI46568.2|  272|Caenorhabditis elegans Hypothetical
           protein ZK856.14 protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 155 PCNSYVCF*NLFGLSCFLLKIYVIFTLFVSYISIK-LFHCYTHTLVGYRHY 6
           PC S   + + FGL C L+   ++ T+   + SIK  F  Y  T+V   ++
Sbjct: 44  PCASSFIWFHFFGLICPLVDFIIVGTIGTFFSSIKSCFIVYIPTIVSLLYH 94


>Z70783-12|CAI46596.2|  272|Caenorhabditis elegans Hypothetical
           protein ZK856.14 protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 155 PCNSYVCF*NLFGLSCFLLKIYVIFTLFVSYISIK-LFHCYTHTLVGYRHY 6
           PC S   + + FGL C L+   ++ T+   + SIK  F  Y  T+V   ++
Sbjct: 44  PCASSFIWFHFFGLICPLVDFIIVGTIGTFFSSIKSCFIVYIPTIVSLLYH 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,533,070
Number of Sequences: 27780
Number of extensions: 381628
Number of successful extensions: 922
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)