Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F21
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 602 KKVPIVLAKVDGGYQQLLDSTAIISILETYLLDKKSQLT 718
           +K P++LA    GY++++D    +  L T +LD  S +T
Sbjct: 796 QKPPLILAAAISGYKEVIDVAYDLPALGT-VLDFMSVMT 833


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 422 CTWVLALKMHILRFLEEVYVFSRLF 348
           C WV+ L  ++LRF  E    + +F
Sbjct: 369 CFWVMKLLYNVLRFGAESQTINFMF 393


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 449 SDTSNLSLVLFQYRTCPFCCK 511
           S T NL LVL  Y    F CK
Sbjct: 206 SGTENLDLVLPIYSQLVFMCK 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,618
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)