Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F21
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70310-4|CAA94368.1|  347|Caenorhabditis elegans Hypothetical pr...   111   7e-25
U29535-7|AAM81113.1|  275|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF003140-1|ABR92609.1|  538|Caenorhabditis elegans Hypothetical ...    29   4.9  
Z81041-9|CAJ55253.1|  824|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81041-8|CAB02784.1|  829|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z82282-3|CAB05275.1|  638|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical ...    28   8.5  

>Z70310-4|CAA94368.1|  347|Caenorhabditis elegans Hypothetical
           protein R11A8.5 protein.
          Length = 347

 Score =  111 bits (266), Expect = 7e-25
 Identities = 60/114 (52%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
 Frame = +2

Query: 437 VINDSDTSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWS-GYKKVP 613
           VIN  D SNL L L+QY TCPFCCKVRA+LD  G SYEVVEV+ V R  IK+S  YKKVP
Sbjct: 55  VINHLDKSNLKLRLYQYETCPFCCKVRAFLDYHGFSYEVVEVNPVTRSQIKFSTTYKKVP 114

Query: 614 IVLAKVDGGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNI 775
           I+ +    G   + +ST IIS L TYL      L +II+ YP     N+ GK +
Sbjct: 115 ILRS----GETTMTESTLIISTLATYLQRPDQSLDQIIQMYPAVDSTNEKGKPV 164


>U29535-7|AAM81113.1|  275|Caenorhabditis elegans Hypothetical
           protein C25H3.7b protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 497 PFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVDGGYQQLLDSTAIIS 676
           P+C K+  +L A  I +EVV     LRQ    S    +P +  +++G  QQ+ DS  I+ 
Sbjct: 57  PYCLKIETFLRANRIKHEVVGTWLTLRQ----SPRGLLPFI--ELNG--QQISDSQVIVW 108

Query: 677 ILETYL-LDKK 706
            L+ +  LD K
Sbjct: 109 KLQKHFDLDDK 119


>AF003140-1|ABR92609.1|  538|Caenorhabditis elegans Hypothetical
           protein C44E4.5 protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 282 NLTVDLGRDLVENNVLDCCKFSFSDGTTIFLNS 184
           +LTV+   DL++N   + C F+ ++G  IFL+S
Sbjct: 206 SLTVEKSMDLIQNGHFETCTFT-NNGEIIFLSS 237


>Z81041-9|CAJ55253.1|  824|Caenorhabditis elegans Hypothetical
           protein C27A7.1b protein.
          Length = 824

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 593 SGYKKVPIVLAKVDGGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVN 757
           SGY K P+V+  +DG  ++ +D   + ++   ++ D   +  ++   YP   F N
Sbjct: 170 SGYTKPPLVILSLDGFAREYVDRNIVQTL--NHIADCGVKADKVYPSYPSKTFPN 222


>Z81041-8|CAB02784.1|  829|Caenorhabditis elegans Hypothetical
           protein C27A7.1a protein.
          Length = 829

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 593 SGYKKVPIVLAKVDGGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVN 757
           SGY K P+V+  +DG  ++ +D   + ++   ++ D   +  ++   YP   F N
Sbjct: 175 SGYTKPPLVILSLDGFAREYVDRNIVQTL--NHIADCGVKADKVYPSYPSKTFPN 227


>Z82282-3|CAB05275.1|  638|Caenorhabditis elegans Hypothetical
           protein T07G12.3 protein.
          Length = 638

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 680 LETYLLDKKSQLTEIIKFYPVSQFVNDAGKNI 775
           L+T+  D ++ L +I+KF P S+F++   KNI
Sbjct: 446 LQTHF-DVRATLLDILKFQPTSKFMDRQQKNI 476


>AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48G1A.4 protein.
          Length = 813

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 350 INAKKRTLPQENEEYAFLKQAPKYTPQYCVINDSDTSNLSLVLFQYRTC 496
           +   K++ P+  E   F+ + PK   ++C + +  + ++ LVL +   C
Sbjct: 368 VKKAKKSAPEPAETLPFVFEMPKNYKKFCALLEKHSESMDLVLERLVKC 416


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,137,996
Number of Sequences: 27780
Number of extensions: 315993
Number of successful extensions: 710
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)