Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_F18
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 186 2e-47
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 155 3e-38
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 70 5e-25
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 70 2e-24
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 104 8e-23
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 103 1e-22
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 103 1e-22
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 103 1e-22
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 102 2e-22
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 102 3e-22
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 100 1e-21
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 100 1e-21
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 100 2e-21
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 98 5e-21
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 98 7e-21
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 88 6e-18
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 87 1e-17
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 81 7e-16
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 52 5e-15
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 72 5e-13
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 29 3.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.7
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical pr... 28 6.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC024838-5|AAY43990.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.4
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 8.5
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 8.5
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 8.5
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 8.5
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 8.5
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 8.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.5
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 8.5
AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine re... 28 8.5
AC024696-12|AAK84511.1| 316|Caenorhabditis elegans Hypothetical... 28 8.5
AC006697-2|AAF60391.1| 316|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 186 bits (453), Expect = 2e-47
Identities = 84/135 (62%), Positives = 104/135 (77%)
Frame = +2
Query: 371 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 550
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 551 KYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 730
+YDS+ S TY +G + AIQYG+GS+ GF+S D V V G+ Q FAEA SEPG+ FVA
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVA 196
Query: 731 AKFDGILGMAFXTIA 775
AKFDGILGMA+ IA
Sbjct: 197 AKFDGILGMAYPEIA 211
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 155 bits (377), Expect = 3e-38
Identities = 84/188 (44%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Frame = +2
Query: 242 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLS 403
+F L + + A+ R+ L + R + + G+ E L+ KY V G P E LS
Sbjct: 5 VFLLLALVALASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLS 62
Query: 404 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 583
+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS +
Sbjct: 63 DYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCT 122
Query: 584 ANGTQFAIQYGSGSLSGFLSTDDVTVGG----LKVRRQTFAEAVSEPGLAFVAAKFDGIL 751
A G F IQYG+GS+ G + D V G + Q A A SEPG+ FVAAKFDGI
Sbjct: 123 ATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIF 182
Query: 752 GMAFXTIA 775
GM + TI+
Sbjct: 183 GMGWDTIS 190
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 70.1 bits (164), Expect(2) = 5e-25
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +2
Query: 518 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 682
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 402
Query: 683 QTFAEAVSEPGLAFVAAKFDGILGMAFXTIA 775
F +A S F DGILG+AF +IA
Sbjct: 403 TVFGQATSLAAF-FEGQPLDGILGLAFKSIA 432
Score = 62.5 bits (145), Expect(2) = 5e-25
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Frame = +2
Query: 215 LKTTMGKISLFFL-ALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYD 373
+K G +LF L AL+A+++ A+ +VPL +++ R G + E+ R +
Sbjct: 201 IKIISGMQNLFLLLALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMN 260
Query: 374 VTGPSP---EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 517
+ +++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 261 KQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 557 DSRKSKTYVANGTQF--AIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 730
D +S Y A + A YGS S SG L D V+ GG+ + + V A
Sbjct: 21 DQLRSDAYAAGVDDYEHAGYYGSDSASGILGFDTVSFGGISESQLIVPDTV-----VATA 75
Query: 731 AKFDGILGMAF 763
DGI+G+ F
Sbjct: 76 EDIDGIMGLGF 86
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 70.1 bits (164), Expect(2) = 2e-24
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +2
Query: 518 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 682
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 196
Query: 683 QTFAEAVSEPGLAFVAAKFDGILGMAFXTIA 775
F +A S F DGILG+AF +IA
Sbjct: 197 TVFGQATSLAAF-FEGQPLDGILGLAFKSIA 226
Score = 60.1 bits (139), Expect(2) = 2e-24
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYDVTGPSP---EPLS 403
LAL+A+++ A+ +VPL +++ R G + E+ R + + ++
Sbjct: 8 LALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMNKQSNDMSVGQYVN 67
Query: 404 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 517
+Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 68 DYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 104 bits (249), Expect = 8e-23
Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 418
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 419 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQ 598
Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS T+ ANG
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKSSTFKANGKP 123
Query: 599 FAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 763
+ IQYGSG+ G+L D V G L V TF A + F GILG+AF
Sbjct: 124 WQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAGGILGLAF 182
Query: 764 XTIA 775
++A
Sbjct: 183 TSLA 186
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 103 bits (247), Expect = 1e-22
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 418
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 419 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 583
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 584 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 763
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 764 XTIA 775
+A
Sbjct: 186 PALA 189
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 103 bits (247), Expect = 1e-22
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 418
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 419 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 583
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 584 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 763
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 764 XTIA 775
+A
Sbjct: 186 PALA 189
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 103 bits (247), Expect = 1e-22
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 418
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 419 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 583
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 584 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 763
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 764 XTIA 775
+A
Sbjct: 186 PALA 189
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 102 bits (245), Expect = 2e-22
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 430
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 431 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 598
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 599 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFXTIA 775
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALS 182
Score = 71.3 bits (167), Expect = 7e-13
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Frame = +2
Query: 413 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 583
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 584 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 763
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 764 XTIA 775
++
Sbjct: 568 PALS 571
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 102 bits (245), Expect = 2e-22
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 430
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 431 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 598
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 599 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFXTIA 775
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALS 182
Score = 71.3 bits (167), Expect = 7e-13
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Frame = +2
Query: 413 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 583
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 584 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 763
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 764 XTIA 775
++
Sbjct: 568 PALS 571
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 102 bits (244), Expect = 3e-22
Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Frame = +2
Query: 389 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 568
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 569 SKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAA 733
S T+V NG + IQYGSG +G L D V G L V TF A S+ F
Sbjct: 117 SSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKISADFKND 175
Query: 734 KFDGILGMAFXTIA 775
DGILG+AF ++A
Sbjct: 176 ATDGILGLAFTSLA 189
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 100 bits (240), Expect = 1e-21
Identities = 59/139 (42%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Frame = +2
Query: 374 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 553
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 554 YDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGL 718
+DS KS T+ NG + IQY SGS G + D V GG L V TF A S
Sbjct: 114 FDSSKSTTFKKNGQSWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHISS 172
Query: 719 AFVAAKFDGILGMAFXTIA 775
F +GILG+AF ++A
Sbjct: 173 NFKNDAAEGILGLAFTSLA 191
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 100 bits (239), Expect = 1e-21
Identities = 58/135 (42%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +2
Query: 386 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 565
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 566 KSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVA 730
KS T+ ANG + IQYGSG+ G+L D V G L V TF A + F
Sbjct: 118 KSSTFKANGKPWQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKN 176
Query: 731 AKFDGILGMAFXTIA 775
+GILG+AF ++A
Sbjct: 177 DAAEGILGLAFTSLA 191
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 99.5 bits (237), Expect = 2e-21
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Frame = +2
Query: 227 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT-GPSPEPLS 403
M I L FLA S+ A++++P + R G E L ++ +P+S
Sbjct: 1 MHLIFLLFLAPFCSA--AVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQPIS 58
Query: 404 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHNKYDS 562
+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C K+D+
Sbjct: 59 DYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCD--NMFCNGWIGSNYTRQKFDT 116
Query: 563 RKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTV-GGLKVRRQTFAEAVSEPGLAFVAAKF 739
KS ++ +F+IQYG G SG+L TD V + GGL +R+Q A ++ + F
Sbjct: 117 SKSSSFSRENRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFAVQPM 175
Query: 740 DGILGMAFXTIA 775
DGI G+A+ +A
Sbjct: 176 DGIFGLAWPALA 187
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 98.3 bits (234), Expect = 5e-21
Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Frame = +2
Query: 245 FFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYL 412
F L+ + + A+ +VP H+ ++ R + G L ++ +P +Y
Sbjct: 4 FVLSPLWACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYF 63
Query: 413 DAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKT 577
D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T
Sbjct: 64 DDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTT 123
Query: 578 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 757
+V +F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+
Sbjct: 124 FVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGL 182
Query: 758 AFXTIA 775
+ +A
Sbjct: 183 GWTALA 188
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 97.9 bits (233), Expect = 7e-21
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Frame = +2
Query: 242 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT----GPSPEPLSNY 409
+F L L+ A+ ++P + R + G E L ++ +PL +Y
Sbjct: 4 VFLLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPLIDY 63
Query: 410 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSK 574
D Y I++GTPPQ VV DT S+NLWV S+ C+ + K++ KS
Sbjct: 64 YDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSS 123
Query: 575 TYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILG 754
T+V +F+IQYGSG+ SG+L TD + +GGL V+ Q F A + G + DGI G
Sbjct: 124 TFVKGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGSEPMDGIFG 182
Query: 755 MAFXTIA 775
+ + I+
Sbjct: 183 LGWPAIS 189
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 88.2 bits (209), Expect = 6e-18
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Frame = +2
Query: 227 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKY-DVTGPSPEPLS 403
M I L F+A S+ A+ ++P + R + G E L ++ PL+
Sbjct: 1 MHLIFLLFIATFCSA--AVLQLPTKSTGSLRAKLIQSGKYPEFLASQHVSRLNSGALPLA 58
Query: 404 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--KYDS 562
+Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K+ S
Sbjct: 59 DYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLKFYS 116
Query: 563 RKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFD 742
KS ++V +F I Y +G+ SG+L TD + +GGL V+ Q FA ++ D
Sbjct: 117 NKSSSFVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLD 175
Query: 743 GILGMAFXTIA 775
G+LG+A+ +A
Sbjct: 176 GVLGLAWPPVA 186
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 87.4 bits (207), Expect = 1e-17
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Frame = +2
Query: 365 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 529
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 530 --IACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG--LKVRRQTFAE 697
AC KY S +Y +GT F+I YG+GS SG+ D + L ++ Q F +
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISYGTGSASGYFGKDTLCFSDTTLCIKSQIFGQ 166
Query: 698 AVSEPGLAFVAAKFDGILGMAFXTIA 775
A + F + DGILG+ F +A
Sbjct: 167 A-NNIAPFFANQEIDGILGLGFTDLA 191
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 81.4 bits (192), Expect = 7e-16
Identities = 53/175 (30%), Positives = 81/175 (46%)
Frame = +2
Query: 251 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 430
LAL+ + + L + R G EL RL+ TG E + ++ D Y
Sbjct: 9 LALLVFCSAGQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTV 64
Query: 431 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQFAIQ 610
+ IGTP Q F+V DT SSNLWV +C + +Y+ S T++A + F +
Sbjct: 65 SVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTASSTFIAGTSNFVLP 124
Query: 611 YGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFXTIA 775
+ G +SG L D++ G K++ Q F L+ V FDG+LG+ + A
Sbjct: 125 FNDGDVSGDLGKDNIQFAGSKIQNQDFGIGTDATRLSGVT--FDGVLGLGWPATA 177
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 51.6 bits (118), Expect(2) = 5e-15
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 284 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 460
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 461 FKVVFDTGSSNLWVPSKKC 517
F + D+GSSNLWVP C
Sbjct: 85 FVLFIDSGSSNLWVPDITC 103
Score = 47.2 bits (107), Expect(2) = 5e-15
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 524 TNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKV--RRQTFAE 697
T AC ++++S S +YV NG +F + Y +G + GF D V Q F +
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTFCFTNTSVCATGQVFGQ 203
Query: 698 AVSEPGLAFVAAKFDGILGMAFXTIA 775
A + G AF DGI+G+ + +A
Sbjct: 204 ATT-IGEAFAKQPEDGIIGLGWPALA 228
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 74.9 bits (176), Expect = 6e-14
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Frame = +2
Query: 401 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 580
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S TY
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 581 VANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDG 745
+A + I+Y SG G L D V +GG L + R ++ G F + +G
Sbjct: 122 IATNRPWQIKYASGDAYGTLGIDTVKIGGSGEAQLAIPR-SYLGVADTVGSDFKWSPKEG 180
Query: 746 ILGMAFXTIA 775
I G+AF +A
Sbjct: 181 IFGLAFTALA 190
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 71.7 bits (168), Expect = 5e-13
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 4/186 (2%)
Frame = +2
Query: 230 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTE-LELLRLKYDVTGPSPEPLSN 406
GK+ + L L+A + + + + + R G EL R++ TG +
Sbjct: 91 GKL-ISLLGLVALCSAGQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVS--FFD 147
Query: 407 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSKT 577
+ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S T
Sbjct: 148 HFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASST 207
Query: 578 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 757
+VA + F + Y G +SG + D G ++ Q F + FDG+LG+
Sbjct: 208 FVAGTSSFNLPYDGGHVSGNVGKDTAQFAGFTIQSQDF--GIGTAATRLFGETFDGVLGL 265
Query: 758 AFXTIA 775
+ A
Sbjct: 266 GWPATA 271
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 626 GCRSRTVSRTGCHSRRTSWTCGCRTCCAANKRCWCS 519
GC GC R C CR CC + C C+
Sbjct: 74 GCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCT 109
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 606 IANWVPFATYVLDLRLSYLLCSKQ 535
+ NW F T L +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 506 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 348
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 596 GCHSRRTSWTCGCRTCCAANKRCWCS 519
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 611 YGSGSLSGFLSTDDVTVGGLKVRRQTF 691
Y GSL GFL DDV L +RQ F
Sbjct: 53 YPDGSLEGFLDIDDVQKKKLDEQRQEF 79
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 596 GCHSRRTSWTCGCRTCCAANKRCWCS 519
GC R C CR CC + C C+
Sbjct: 83 GCCCCRPRCCCCCRRCCTCCRTCCCT 108
>Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical
protein C05C10.3 protein.
Length = 521
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +2
Query: 443 GTPPQSFKVVFDTGSSNLWVPSKKCHYTN--IACLLHNKYDSRKSKTYVANGTQFAIQYG 616
G P + + TG L S N + LL + + +YV +FA QY
Sbjct: 65 GIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGENGEFARQYL 124
Query: 617 SGSL 628
SG L
Sbjct: 125 SGEL 128
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 596 GCHSRRTSWTCGCRTCCAANKRCWCS 519
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPRCCCCCRRCCTCCRTCCCT 109
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 596 GCHSRRTSWTCGCRTCCAANKRCWCS 519
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>AC024838-5|AAY43990.1| 301|Caenorhabditis elegans Hypothetical
protein Y59E9AL.8 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 164 CDKFLIKKNILDLGKNGFLFQRTAYEKLTIVIY*FIKI--EHCDRNVLSIEKQR 9
C++FLIK + +D+ K L +R + +L + FIKI H R +SI +R
Sbjct: 239 CEEFLIKTDKVDMAKKLILAERFSLCELMVSWKSFIKIVQAHFLRITVSIASKR 292
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 575 SWTCGCRTCCAANKRCWCSGTF 510
S CG CA NKRC C T+
Sbjct: 29 STDCGTGNYCAGNKRCACLTTY 50
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 753 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 622
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 753 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 622
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 753 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 622
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 753 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 622
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 753 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 622
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 623 CRSRTVSRTGCHSRRTSWTCGC-RTCCAANKRCWCS 519
C S+ RT C S + CGC R CC C+
Sbjct: 159 CGSQPYGRTPCRSGCPNGDCGCGRPCCYYQNPTCCN 194
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -2
Query: 768 VXKAIPRIPSNLAATK-ASPGSDTASANVWRRTLSPPTVTSSVERKPERLPEPY 610
+ + + + +A K +SPGS ++N SP T S P+ P PY
Sbjct: 35 IERMVGKFDGKVAVEKTSSPGSSVGTSNAHSPGTSPSTSASGASGIPQPPPLPY 88
>AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 3 protein.
Length = 344
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -3
Query: 545 AANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKGQSHRI 366
A N CW + TF A I C P R+ +L+S + + +TM SH+
Sbjct: 192 AGNMSCWSAATF-SAIVYMTIPC-FPIYGVIVFFRHKTLKSLDGRGRITMSETTRSSHKQ 249
Query: 365 LISTAPVQ 342
LI +Q
Sbjct: 250 LIKALTIQ 257
>AC024696-12|AAK84511.1| 316|Caenorhabditis elegans Hypothetical
protein F07B7.2 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 169 IFNSFRVLQSRLVAASKNNNGKDIFIFFGADRQLRNGTI*GAITSYENCEN 321
IF++ + Q+RLVA ++ NGK++ IF + + I S +N EN
Sbjct: 175 IFDASGLGQARLVAEAQTANGKEVAIFVKDTPKYYSRAGFAKIHSDDNAEN 225
>AC006697-2|AAF60391.1| 316|Caenorhabditis elegans Hypothetical
protein W09B7.2 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 169 IFNSFRVLQSRLVAASKNNNGKDIFIFFGADRQLRNGTI*GAITSYENCEN 321
IF++ + Q+RLVA ++ NGK++ IF + + I S +N EN
Sbjct: 175 IFDASGLGQARLVAEAQTANGKEVAIFVKDTPKYYSRAGFAKIHSDDNAEN 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,319,791
Number of Sequences: 27780
Number of extensions: 377993
Number of successful extensions: 1221
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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